ERGR - Ethanol-Related Gene Resource

Dataset Description

Dataset Name: 15745951

Species: Mouse

No. of Genes: 277

Tissue: Nucleus accumbens, prefrontal cortex, and ventral tegmental area

Phenotype: Acute ethanol response

Publication: Kerns et al. J Neurosci. (2005) Ethanol-responsive brain region expression networks: implications for behavioral responses to acute ethanol in DBA/2J versus C57BL/6J mice. PubMed

Dataset Summary: The inbred mouse strains DBA/2J and C57BL/6J exhibit contrasting acute behavioral responses to ethanol. We used oligonucleotide microarrays and bioinformatics methods to characterize patterns of gene expression in three brain regions of the mesolimbic reward pathway of these strains. Expression profiling included examination of both differences in gene expression 4 h after acute ethanol (2 g/kg). Using a rigorous stepwise method for microarray analysis, we identified 307 ethanol-regulated genes in the nucleus accumbens, prefrontal cortex, and ventral tegmental area.

Gene list of this dataset (277 genes)
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GeneID Symbol Name Genetic location Original ID1 Original ID2
232934 P42pop Myb protein P42POP 7 A3 P42pop AW047050
234023 Arglu1 arginine and glutamate rich 1 8 A1.1 9430010O03Rik AW124028
234358 D10627 cDNA sequence D10627 8 B3.3 D10627 D10627
235320 Zbtb16 zinc finger and BTB domain containing 16 9 A5.3|9 23.0 cM Zfp145 AI553024
235459 Gtf2a2 general transcription factor II A, 2 9 D Gtf2a2 AI851798
244962 Snx14 sorting nexin 14 9 E3.1 Snx14 AI839611
252837 Ccrl1 chemokine (C-C motif) receptor-like 1 9 F1 Ccrl1 AA050273
26441 Psma4 proteasome (prosome, macropain) subunit, alpha type 4 9 C Psma4 AV266216
26950 Vsnl1 visinin-like 1 12 A2 Vsnl1 D21165
27367 Rpl3 ribosomal protein L3 15 E1 Rpl3 Y00225
27388 Ptdss2 phosphatidylserine synthase 2 7 F5 Ptdss2 AI840922
27397 Mrpl17 mitochondrial ribosomal protein L17 7 F1 Mrpl17 AI843081
28018 Ubfd1 ubiquitin family domain containing 1 7 F3|7 59.0 cM D7Wsu128e AA388099
28185 Tomm70a translocase of outer mitochondrial membrane 70 homolog A (yeast) 16 C1.1|16 36.9 cM D16Wsu109e AI844034
29813 Zfp385a zinc finger protein 385A 15 F3 Zfp385 AI848518
29816 Hip1r huntingtin interacting protein 1 related 5 F Hip1r AI846182
29876 Clic4 chloride intracellular channel 4 (mitochondrial) 4 D3 Clic4 AI845237
29876 Clic4 chloride intracellular channel 4 (mitochondrial) 4 D3 Clic4 AI849533
30948 Bin1 bridging integrator 1 18 B1|18 14.0 cM Bin1 U60884
30953 Schip1 schwannomin interacting protein 1 3 E2 Schip1 AI840446
319340 C130065N10Rik AI891514
384783 Irs2 insulin receptor substrate 2 8 A1.1 Irs2 AF090738
50765 Trfr2 transferrin receptor 2 5 G2 Trfr2 AI596094
51897 Harbi1 harbinger transposase derived 1 2 E1 D2Ertd391e AW121160
52502 Carhsp1 calcium regulated heat stable protein 1 16 A1|16 1.7 cM Carhsp1 AI847631
52696 Zwint ZW10 interactor 10 B5.3|10 38.0 cM D10Ertd749e D00073
52705 Krr1 KRR1, small subunit (SSU) processome component, homolog (yeast) 10 D2|10 60.0 cM Hrb2 AW210014
53379 Hnrnpa2b1 heterogeneous nuclear ribonucleoprotein A2/B1 - Hnrpa2b1 AF073993
53761 Bat2 HLA-B associated transcript 2 17 B1|17 19.04 cM Bat2 AW050268
54003 Nell2 NEL-like 2 (chicken) - Nell2 U59230
54188 Cpsf4 cleavage and polyadenylation specific factor 4 5 G2 Cpsf4 AF033201
54371 Chst2 carbohydrate sulfotransferase 2 - Chst2 AW121776
54633 Pqbp1 polyglutamine binding protein 1 X A1.1|X 2.0 cM Pqbp1 AJ250406
56177 Olfm1 olfactomedin 1 2 A3 Olfm1 D78265
56205 Ensa endosulfine alpha 3 F2.1 Ensa AJ005985
56213 Htra1 HtrA serine peptidase 1 7 F3 Prss11 AW125478
56356 Gltp glycolipid transfer protein 5 F Gltp AI842825
56421 Pfkp phosphofructokinase, platelet 13 A1 Pfkp AI853802
56457 Clptm1 cleft lip and palate associated transmembrane protein 1 7 A3 Clptm1 D67067
56736 Rnf14 ring finger protein 14 18 B3|18 17.0 cM Rnf14 AW123517
56747 Sez6l seizure related 6 homolog like 5 F AI843918 AW208098
57320 Park7 Parkinson disease (autosomal recessive, early onset) 7 4 E1 Park7 AB015652
57438 March7 membrane-associated ring finger (C3HC4) 7 2 C3 Axot AW212859
57780 Fxyd7 FXYD domain-containing ion transport regulator 7 7 B1 Fxyd7 AI844246
65098 Zfand6 zinc finger, AN1-type domain 6 7 D3 3110005P07Rik AW124081
654309 Nrp - 12 D2 Nrp D50086
66105 Ube2d3 ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast) 3 G3 Ube2d3 AI847826
66141 Ifitm3 interferon induced transmembrane protein 3 7 F5 Ifitm3 AW125390
66142 Cox7b cytochrome c oxidase subunit VIIb X C3 Cox7b AI851220
66365 Ccdc90b coiled-coil domain containing 90B 7 E1 2310015N07Rik AA684456
Page: 1 2 3 4 5 6 list all

GeneID	Symbol	Name	Genetic location	Original ID1	Original ID2
232934	P42pop	Myb protein P42POP	7 A3	P42pop	AW047050
234023	Arglu1	arginine and glutamate rich 1	8 A1.1	9430010O03Rik	AW124028
234358	D10627	cDNA sequence D10627	8 B3.3	D10627	D10627
235320	Zbtb16	zinc finger and BTB domain containing 16	9 A5.3\|9 23.0 cM	Zfp145	AI553024
235459	Gtf2a2	general transcription factor II A, 2	9 D	Gtf2a2	AI851798
244962	Snx14	sorting nexin 14	9 E3.1	Snx14	AI839611
252837	Ccrl1	chemokine (C-C motif) receptor-like 1	9 F1	Ccrl1	AA050273
26441	Psma4	proteasome (prosome, macropain) subunit, alpha type 4	9 C	Psma4	AV266216
26950	Vsnl1	visinin-like 1	12 A2	Vsnl1	D21165
27367	Rpl3	ribosomal protein L3	15 E1	Rpl3	Y00225
27388	Ptdss2	phosphatidylserine synthase 2	7 F5	Ptdss2	AI840922
27397	Mrpl17	mitochondrial ribosomal protein L17	7 F1	Mrpl17	AI843081
28018	Ubfd1	ubiquitin family domain containing 1	7 F3\|7 59.0 cM	D7Wsu128e	AA388099
28185	Tomm70a	translocase of outer mitochondrial membrane 70 homolog A (yeast)	16 C1.1\|16 36.9 cM	D16Wsu109e	AI844034
29813	Zfp385a	zinc finger protein 385A	15 F3	Zfp385	AI848518
29816	Hip1r	huntingtin interacting protein 1 related	5 F	Hip1r	AI846182
29876	Clic4	chloride intracellular channel 4 (mitochondrial)	4 D3	Clic4	AI845237
29876	Clic4	chloride intracellular channel 4 (mitochondrial)	4 D3	Clic4	AI849533
30948	Bin1	bridging integrator 1	18 B1\|18 14.0 cM	Bin1	U60884
30953	Schip1	schwannomin interacting protein 1	3 E2	Schip1	AI840446
319340				C130065N10Rik	AI891514
384783	Irs2	insulin receptor substrate 2	8 A1.1	Irs2	AF090738
50765	Trfr2	transferrin receptor 2	5 G2	Trfr2	AI596094
51897	Harbi1	harbinger transposase derived 1	2 E1	D2Ertd391e	AW121160
52502	Carhsp1	calcium regulated heat stable protein 1	16 A1\|16 1.7 cM	Carhsp1	AI847631
52696	Zwint	ZW10 interactor	10 B5.3\|10 38.0 cM	D10Ertd749e	D00073
52705	Krr1	KRR1, small subunit (SSU) processome component, homolog (yeast)	10 D2\|10 60.0 cM	Hrb2	AW210014
53379	Hnrnpa2b1	heterogeneous nuclear ribonucleoprotein A2/B1	-	Hnrpa2b1	AF073993
53761	Bat2	HLA-B associated transcript 2	17 B1\|17 19.04 cM	Bat2	AW050268
54003	Nell2	NEL-like 2 (chicken)	-	Nell2	U59230
54188	Cpsf4	cleavage and polyadenylation specific factor 4	5 G2	Cpsf4	AF033201
54371	Chst2	carbohydrate sulfotransferase 2	-	Chst2	AW121776
54633	Pqbp1	polyglutamine binding protein 1	X A1.1\|X 2.0 cM	Pqbp1	AJ250406
56177	Olfm1	olfactomedin 1	2 A3	Olfm1	D78265
56205	Ensa	endosulfine alpha	3 F2.1	Ensa	AJ005985
56213	Htra1	HtrA serine peptidase 1	7 F3	Prss11	AW125478
56356	Gltp	glycolipid transfer protein	5 F	Gltp	AI842825
56421	Pfkp	phosphofructokinase, platelet	13 A1	Pfkp	AI853802
56457	Clptm1	cleft lip and palate associated transmembrane protein 1	7 A3	Clptm1	D67067
56736	Rnf14	ring finger protein 14	18 B3\|18 17.0 cM	Rnf14	AW123517
56747	Sez6l	seizure related 6 homolog like	5 F	AI843918	AW208098
57320	Park7	Parkinson disease (autosomal recessive, early onset) 7	4 E1	Park7	AB015652
57438	March7	membrane-associated ring finger (C3HC4) 7	2 C3	Axot	AW212859
57780	Fxyd7	FXYD domain-containing ion transport regulator 7	7 B1	Fxyd7	AI844246
65098	Zfand6	zinc finger, AN1-type domain 6	7 D3	3110005P07Rik	AW124081
654309	Nrp	-	12 D2	Nrp	D50086
66105	Ube2d3	ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	3 G3	Ube2d3	AI847826
66141	Ifitm3	interferon induced transmembrane protein 3	7 F5	Ifitm3	AW125390
66142	Cox7b	cytochrome c oxidase subunit VIIb	X C3	Cox7b	AI851220
66365	Ccdc90b	coiled-coil domain containing 90B	7 E1	2310015N07Rik	AA684456