Search results: The pahtway p2788 has 87 genes in the original annotation. Currently, there are 67 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group ? Functional group ?
648BMI1FLVI2/BMI1 | PCGF4 | RNF51 | flvi-2/bmi-1BMI1 proto-oncogene, polycomb ring finger10p11.23PMID:cooccurChromatin Remodeling Genes
7431VIMCTRCT30 | HEL113vimentin10p13CV:PGCnp
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
2625GATA3HDR | HDRSGATA binding protein 310p15CV:PGCnp
DEG:Maycox_2009
DMG:Jaffe_2016
9806SPOCK2testican-2sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 210pter-q25.3CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
4076CAPRIN1GPIAP1 | GPIP137 | GRIP137 | M11S1 | RNG105 | p137GPIcell cycle associated protein 111p13CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
4925NUCB2HEL-S-109 | NEFAnucleobindin 211p15.1CV:GWASdb
CV:PGCnp
10581IFITM21-8D | DSPA2cinterferon induced transmembrane protein 211p15.5Expression
PMID:cooccur
5970RELANFKB3 | p65v-rel avian reticuloendotheliosis viral oncogene homolog A11q13CV:PGCnp
DNM:Ambalavanan_2016
Network
PMID:cooccur
2286FKBP2FKBP-13 | PPIaseFK506 binding protein 211q13.1CV:PGCnp
916CD3EIMD18 | T3E | TCRECD3e molecule11q23CV:PGCnp
DMG:vanEijk_2014
GO_Annotation
GSMA_I
10525HYOU1GRP-170 | Grp170 | HSP12A | ORP-150 | ORP150hypoxia up-regulated 111q23.1-q23.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
9976CLEC2BAICL | CLECSF2 | HP10085 | IFNRG1C-type lectin domain family 2 member B12p13-p12CV:PGCnp
DMG:Nishioka_2013
694BTG1-B-cell translocation gene 1, anti-proliferative12q22CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
8848TSC22D1Ptg-2 | TGFB1I4 | TSC22TSC22 domain family member 113q14CV:PGCnp
DMG:Nishioka_2013
Network
CompositeSet
Darnell FMRP targets
9834KIAA0125C14orf110 | FAM30A | HSPC053KIAA012514q32.33DMG:Montano_2016
6638SNRPNHCERN3 | PWCR | RT-LI | SM-D | SMN | SNRNP-N | SNURF-SNRPN | sm-Nsmall nuclear ribonucleoprotein polypeptide N15q11.2CNV:YES
CV:PGCnp
Network
PMID:cooccur
1512CTSHACC-4 | ACC-5 | ACC4 | ACC5 | CPSBcathepsin H15q25.1CV:PGCnp
8140SLC7A54F2LC | CD98 | D16S469E | E16 | LAT1 | MPE16 | hLAT1solute carrier family 7 member 516q24.3CV:PGCnp
DMG:Montano_2016
DMG:Wockner_2014
GO_Annotation
CELL METABOLISM
1655DDX5G17P1 | HLR1 | HUMP68 | p68DEAD-box helicase 517q21CV:PGCnp
DMG:Wockner_2014
Network
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
6774STAT3ADMIO | APRF | HIESsignal transducer and activator of transcription 3 (acute-phase response factor)17q21.31CV:PGCnp
CV:PheWAS
DMG:vanEijk_2014
GO_Annotation
Network
PMID:cooccur
8165AKAP1AKAP | AKAP121 | AKAP149 | AKAP84 | D-AKAP1 | PPP1R43 | PRKA1 | SAKAP84 | TDRD17A-kinase anchoring protein 117q22CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
116ADCYAP1PACAPadenylate cyclase activating polypeptide 1 (pituitary)18p11Association
CV:PGCnp
GO_Annotation
PMID:cooccur
6925TCF4E2-2 | FECD3 | ITF-2 | ITF2 | PTHS | SEF-2 | SEF2 | SEF2-1 | SEF2-1A | SEF2-1B | SEF2-1D | TCF-4 | bHLHb19transcription factor 418q21.1CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
Expression
PMID:cooccur
CompositeSet
Darnell FMRP targets
7001PRDX2HEL-S-2a | NKEF-B | NKEFB | PRP | PRX2 | PRXII | PTX1 | TDPX1 | TPX1 | TSAperoxiredoxin 219p13.2CV:PGCnp
DMG:Jaffe_2016
CELL METABOLISM
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
1995ELAVL3HUC | HUCL | PLE21ELAV like neuron-specific RNA binding protein 319p13.2DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
7392USF2FIP | bHLHb12upstream transcription factor 2, c-fos interacting19q13CV:PGCnp
DMG:Wockner_2014
6183MRPS12MPR-S12 | MT-RPS12 | RPMS12 | RPS12 | RPSM12mitochondrial ribosomal protein S1219q13.1-q13.2CV:PGCnp
2217FCGRTFCRN | alpha-chainFc fragment of IgG receptor and transporter19q13.3CV:PGCnp
1760DMPKDM | DM1 | DM1PK | DMK | MDPK | MT-PKdystrophia myotonica protein kinase19q13.3CV:PGCnp
PMID:cooccur
79143MBOAT7BB1 | LENG4 | LPIAT | LRC4 | MBOA7 | OACT7 | hMBOA-7membrane bound O-acyltransferase domain containing 719q13.4CV:PGCnp
DMG:Jaffe_2016
7805LAPTM5CLAST6lysosomal protein transmembrane 51p34CV:PGCnp
3399ID3HEIR-1 | bHLHb25inhibitor of DNA binding 3, HLH protein1p36.13-p36.12CV:PGCnp
PMID:cooccur
947CD34-CD34 molecule1q32CV:GWASdb
CV:PGCnp
PMID:cooccur
10955SERINC3AIGP1 | DIFF33 | SBBI99 | TDE | TDE1 | TMS-1serine incorporator 320q13.12DMG:Jaffe_2016
1002CDH4CAD4 | R-CAD | RCADcadherin 420q13.3CV:GWASdb
CV:PGCnp
GO_Annotation
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
8204NRIP1RIP140nuclear receptor interacting protein 121q11.2CV:PGCnp
DNM:Girard_2011
GO_Annotation
CompositeSet
Darnell FMRP targets
7074TIAM1-T-cell lymphoma invasion and metastasis 121q22.11CV:PGCnp
GO_Annotation
Network
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
Potential synaptic genes
6721SREBF2SREBP-2 | SREBP2 | bHLHd2sterol regulatory element binding transcription factor 222q13CV:PGCnp
PMID:cooccur
CompositeSet
Darnell FMRP targets
6711SPTBN1ELF | HEL102 | SPTB2 | betaSpIIspectrin beta, non-erythrocytic 12p21CV:GWASdb
CV:PGCnp
Network
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_PocklingtonH1
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
Potential synaptic genes
7837PXDNCOPOA | D2S448 | D2S448E | MG50 | PRG2 | PXN | VPOperoxidasin2p25CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
Ascano FMRP targets
274BIN1AMPH2 | AMPHL | SH3P9bridging integrator 12q14CV:PGCnp
DMG:vanEijk_2014
DMG:Wockner_2014
GSMA_I
GSMA_IIA
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
CompositeSet
250ALPPALP | PALP | PLAP | PLAP-1alkaline phosphatase, placental2q37CV:PGCnp
1524CX3CR1CCRL1 | CMKBRL1 | CMKDR1 | GPR13 | GPRV28 | V28C-X3-C motif chemokine receptor 13p21.3CV:PGCnp
PMID:cooccur
961CD47IAP | MER6 | OA3CD47 molecule3q13.1-q13.2CV:PGCnp
Expression
GSMA_IIA
GSMA_IIE
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
868CBLBCbl-b | Nbla00127 | RNF56Cbl proto-oncogene B, E3 ubiquitin protein ligase3q13.11CV:PGCnp
DMG:Nishioka_2013
GSMA_IIA
GSMA_IIE
4311MMECALLA | CD10 | NEP | SFEmembrane metallo-endopeptidase3q25.2CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
PMID:cooccur
4086SMAD1BSP-1 | BSP1 | JV4-1 | JV41 | MADH1 | MADR1SMAD family member 14q31CV:PGCnp
GO_Annotation
7416VDAC1PORIN | VDAC-1voltage dependent anion channel 15q31CV:PGCnp
DMG:Jaffe_2016
DNM:Fromer_2014
GSMA_I
Network
PMID:cooccur
EXCITABILITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_mitochondria
G2Cdb.human_Synaptosome
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Potential synaptic genes
6932TCF7TCF-1transcription factor 7 (T-cell specific, HMG-box)5q31.1CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_I
PMID:cooccur
3133HLA-EEA1.2 | EA2.1 | HLA-6.2 | MHC | QA1major histocompatibility complex, class I, E6p21.3CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GSMA_I
63940GPSM3AGS4 | C6orf9 | G18 | G18.1a | G18.1b | G18.2 | NG1G-protein signaling modulator 36p21.3CV:GWASdb
CV:PGCnp
GSMA_I
7128TNFAIP3A20 | AISBL | OTUD7C | TNFA1P2TNF alpha induced protein 36q23CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
10320IKZF1Hs.54452 | IK1 | IKAROS | LYF1 | LyF-1 | PPP1R92 | PRO0758 | ZNFN1A1IKAROS family zinc finger 17p12.2CV:PGCnp
DEG:Sanders_2013
DMG:Wockner_2014
GO_Annotation
11335CBX3HECH | HP1-GAMMA | HP1Hs-gammachromobox 37p15.2CV:PGCnp
PMID:cooccur
3205HOXA9ABD-B | HOX1 | HOX1.7 | HOX1Ghomeobox A97p15.2DMG:Wockner_2014
5575PRKAR1BPRKAR1protein kinase cAMP-dependent type I regulatory subunit beta7p22CV:PGCnp
DMG:Wockner_2014
CANABINOID
DOPAMINE
INTRACELLULAR SIGNAL TRANSDUCTION
SEROTONIN
8379MAD1L1MAD1 | PIG9 | TP53I9 | TXBP181MAD1 mitotic arrest deficient-like 1 (yeast)7p22CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
CV:Ripke_2013
DMG:Jaffe_2016
DMG:Montano_2016
DMG:Wockner_2014
LK:YES
PMID:cooccur
9172MYOM2TTNAPmyomesin 28p23.3CV:GWAScat
CV:GWASdb
CV:PGCnp
5339PLECEBS1 | EBSMD | EBSND | EBSO | EBSOG | EBSPA | HD1 | LGMD2Q | PCN | PLEC1 | PLEC1b | PLTNplectin8q24CV:PGCnpSTRUCTURAL PLASTICITY
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
5646PRSS3MTG | PRSS4 | T9 | TRY3 | TRY4protease, serine 39p11.2CV:PGCnp
GO_Annotation
7169TPM2AMCD1 | DA1 | DA2B | HEL-S-273 | NEM4 | TMSBtropomyosin 2 (beta)9p13CV:PGCnp
DMG:vanEijk_2014
Network
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
10488CREB3LUMAN | LZIP | sLZIPcAMP responsive element binding protein 39p13.3DMG:Nishioka_2013
7091TLE4BCE-1 | BCE1 | E(spI) | ESG | ESG4 | GRG4 | Grg-4transducin like enhancer of split 49q21.31CV:PGCnp
DMG:Jaffe_2016
5900RALGDSRGDS | RGF | RalGEFral guanine nucleotide dissociation stimulator9q34.3CV:PGCnp
DMG:Jaffe_2016
DMG:vanEijk_2014
DMG:Wockner_2014
DNM:Guipponi_2014
PMID:cooccur
CompositeSet
Darnell FMRP targets
3561IL2RGCD132 | CIDX | IL-2RG | IMD4 | P64 | SCIDX | SCIDX1interleukin 2 receptor subunit gammaXq13.1PMID:cooccur
2539G6PDG6PD1glucose-6-phosphate dehydrogenaseXq28CV:PGCnp
PMID:cooccur
2664GDI11A | GDIL | MRX41 | MRX48 | OPHN2 | RABGD1A | RABGDIA | XAP-4GDP dissociation inhibitor 1Xq28CV:PGCnp
PMID:cooccur
INTRACELLULAR TRAFFICKING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_clathrin
G2Cdb.human_mGluR5
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Potential synaptic genes