DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PPQY
Uniprot ID:
O75791
Source protein:
GRB2-related adapter protein 2
Source gene:
GRAP2
Class:
ITCH
Location:
204:207
E3 ligase:
ITCH,NEDD4
DEGRON score:
0.675
ASA_SCORE:
82.6
COIL:
0.8383
CONS_SCORE:
0.4961
DSS_SCORE:
0.9356
HELIX:
0.0552
FCONS_SCORE:
0.9897
RIG_SCORE:
0.5461
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Q203P
TCGA-41-2575
GBM
TCGA
PPQY
ITCH
0.3056
p.H198N
TCGA-BG-A222
UCEC
TCGA
PPQY
ITCH
0.1667
p.A208V
TCGA-DK-A6AW
BLCA
TCGA
PPQY
ITCH
0.3056
p.H198Q
TCGA-EO-A22T
UCEC
TCGA
PPQY
ITCH
0.1667
p.H198Q
SIDM00498
Colorectal Carcinoma
GDSC
PPQY
ITCH
0.1667
p.H198Q
ACH-000970
Colon/Colorectal Cancer
CCLE
PPQY
ITCH
0.1667
p.Q206H
TCGA-FS-A1ZW
SKCM
TCGA
PPQY
ITCH
0.647
p.Q206H
SIDM00348
Esophageal Squamous Cell Carcinoma
GDSC
PPQY
ITCH
0.647
p.Q206H
ACH-000488
Esophageal Cancer
CCLE
PPQY
ITCH
0.647
p.A210G
DO6152
BRCA
ICGC
PPQY
ITCH
0.25
p.R211Q
DO6260
CESC
ICGC
PPQY
ITCH
0.2222
p.R211Q
DO233820
GACA
ICGC
PPQY
ITCH
0.2222
p.W209C
DO228948
LICA
ICGC
PPQY
ITCH
0.2778
p.V199L
DO229028
LICA
ICGC
PPQY
ITCH
0.1944
p.R208Q
DO44876
LIHC
ICGC
PPQY
ITCH
0.3056
p.V199G
DO27699
LUSC
ICGC
PPQY
ITCH
0.1944
p.T196A
DO35442
PACA
ICGC
PPQY
ITCH
0.1111
p.A212V
DO47873
STAD
ICGC
PPQY
ITCH
0.1944
p.A212V
DO41235
UCEC
ICGC
PPQY
ITCH
0.1944
p.D197Y
DO42472
UCEC
ICGC
PPQY
ITCH
0.1389
p.P211L
ACH-001521
Skin Cancer
CCLE
PPQY
ITCH
0.2222
Drug responses associated with GRAP2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PPQY
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15162
Phospholipid scramblase 1
ITCH
22:25
PPQY
ITCH,NEDD4
0.9984
More...
O43809
Cleavage and polyadenylation specificity factor subunit 5
ITCH
155:158
PPQY
ITCH,NEDD4
0.5897
More...
O75791
GRB2-related adapter protein 2
ITCH
204:207
PPQY
ITCH,NEDD4
0.675
More...
P10153
Non-secretory ribonuclease
ITCH
147:150
PPQY
ITCH,NEDD4
0.8403
More...
P35680
Hepatocyte nuclear factor 1-beta
ITCH
519:522
PPQY
ITCH,NEDD4
0.9746
More...
P47902
Homeobox protein CDX-1
ITCH
39:42
PPQY
ITCH,NEDD4
0.9834
More...
Q15751
Probable E3 ubiquitin-protein ligase HERC1
ITCH
4383:4386
PPQY
ITCH,NEDD4
0.6066
More...
Q16650
T-box brain protein 1
ITCH
550:553
PPQY
ITCH,NEDD4
0.9804
More...
Q24JP5
Transmembrane protein 132A
ITCH
244:247
PPQY
ITCH,NEDD4
0.8056
More...
Q5JTH9
RRP12-like protein
ITCH
1209:1212
PPQY
ITCH,NEDD4
0.8336
More...
Q68CP9
AT-rich interactive domain-containing protein 2
ITCH
850:853
PPQY
ITCH,NEDD4
0.9824
More...
Q71SY5
Mediator of RNA polymerase II transcription subunit 25
ITCH
269:272
PPQY
ITCH,NEDD4
0.9206
More...
Q8IVH2
Forkhead box protein P4
ITCH
628:631
PPQY
ITCH,NEDD4
0.899
More...
Q8NFD5
AT-rich interactive domain-containing protein 1B
ITCH
581:584
PPQY
ITCH,NEDD4
0.8798
More...
Q8TB72
Pumilio homolog 2
ITCH
342:345
PPQY
ITCH,NEDD4
0.751
More...
Q92585
Mastermind-like protein 1
ITCH
670:673
PPQY
ITCH,NEDD4
0.9964
More...
Q96RT1
Erbin
ITCH
974:977
PPQY
ITCH,NEDD4
0.9986
More...
Q99626
Homeobox protein CDX-2
ITCH
34:37
PPQY
ITCH,NEDD4
0.7582
More...
Q9H4A3
Serine/threonine-protein kinase WNK1
ITCH
951:954
PPQY
ITCH,NEDD4
0.9234
More...
Q9H7P6
Multivesicular body subunit 12B
ITCH
173:176
PPQY
ITCH,NEDD4
0.9906
More...
Q9NW97
Transmembrane protein 51
ITCH
236:239
PPQY
ITCH,NEDD4
0.9991
More...
Q9NZ53
Podocalyxin-like protein 2
ITCH
94:97
PPQY
ITCH,NEDD4
0.6559
More...
Q9P0N8
E3 ubiquitin-protein ligase MARCHF2
ITCH
33:36
PPQY
ITCH,NEDD4
0.7278
More...
Q9UHV7
Mediator of RNA polymerase II transcription subunit 13
ITCH
587:590
PPQY
ITCH,NEDD4
0.9964
More...
Q9UPX0
Protein turtle homolog B
ITCH
145:148
PPQY
ITCH,NEDD4
0.7346
More...
Q9Y2J4
Angiomotin-like protein 2
ITCH
210:213
PPQY
ITCH,NEDD4
0.9661
More...
Q5T0L3
Spermatogenesis-associated protein 46
ITCH
53:56
PPQY
ITCH,NEDD4
0.9935
More...
Q86VI1
Exocyst complex component 3-like protein
ITCH
299:302
PPQY
ITCH,NEDD4
0.6459
More...
Q8WUU8
Transmembrane protein 174
ITCH
179:182
PPQY
ITCH,NEDD4
0.9754
More...
Q9ULL0
Acrosomal protein KIAA1210
ITCH
1154:1157
PPQY
ITCH,NEDD4
0.9027
More...
P0CJ78
Zinc finger protein 865
ITCH
74:77
PPQY
ITCH,NEDD4
0.9965
More...