DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PPQY
Uniprot ID:
Q5JTH9
Source protein:
RRP12-like protein
Source gene:
RRP12
Class:
ITCH
Location:
1209:1212
E3 ligase:
ITCH,NEDD4
DEGRON score:
0.8336
ASA_SCORE:
94.55
COIL:
0.7435
CONS_SCORE:
0.2218
DSS_SCORE:
0.6167
HELIX:
0.2385
FCONS_SCORE:
0.6061
RIG_SCORE:
0.7002
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R1221C
TCGA-24-1845
OV
TCGA
PPQY
ITCH
0.0833
p.R1221C
DO29920
OV
ICGC
PPQY
ITCH
0.0833
p.E1204K
TCGA-CR-6472
HNSC
TCGA
PPQY
ITCH
0.1944
p.E1204K
TCGA-QK-A64Z
HNSC
TCGA
PPQY
ITCH
0.1944
p.E1204K
DO15870
HNSC
ICGC
PPQY
ITCH
0.1944
p.E1204K
DO49053
HNSC
ICGC
PPQY
ITCH
0.1944
p.E1204D
TCGA-EE-A181
SKCM
TCGA
PPQY
ITCH
0.1944
p.E1204D
DO37444
SKCM
ICGC
PPQY
ITCH
0.1944
p.R1221H
TCGA-EO-A22R
UCEC
TCGA
PPQY
ITCH
0.0833
p.R1221H
DO42713
UCEC
ICGC
PPQY
ITCH
0.0833
p.P1209S
TCGA-Y8-A894
KIRP
TCGA
PPQY
ITCH
0.6752
p.P1209S
DO49798
KIRP
ICGC
PPQY
ITCH
0.6752
p.P1222L
DO50437
ESAD
ICGC
PPQY
ITCH
0.0556
p.S1217F
DO228947
LICA
ICGC
PPQY
ITCH
0.6389
p.I1219V
DO234007
THCA
ICGC
PPQY
ITCH
0.1389
p.Q1211H
SIDM01016
T-Lymphoblastic Leukemia
GDSC
PPQY
ITCH
0.647
p.Q1211H
ACH-000995
Leukemia
CCLE
PPQY
ITCH
0.647
p.P1210T
SIDM00657
Acute Myeloid Leukemia
GDSC
PPQY
ITCH
0.7031
p.P1210T
ACH-000045
Leukemia
CCLE
PPQY
ITCH
0.7031
p.P1210T
MV-4-11
haematopoietic_and_lymphoid_tissue
COSMIC
PPQY
ITCH
0.7031
p.P1210S
SIDM00612
Glioma
GDSC
PPQY
ITCH
0.6752
p.P1210S
ACH-002257
Brain Cancer
CCLE
PPQY
ITCH
0.6752
p.P1210S
KINGS-1
central_nervous_system
COSMIC
PPQY
ITCH
0.6752
p.R1202H
SNG-M
endometrium
COSMIC
PPQY
ITCH
0.1389
p.R1202C
SNU-1040
large_intestine
COSMIC
PPQY
ITCH
0.1389
p.G1214V
COR-L32
lung
COSMIC
PPQY
ITCH
0.2778
p.K1205N
SU-DHL-16
haematopoietic_and_lymphoid_tissue
COSMIC
PPQY
ITCH
0.2222
Drug responses associated with RRP12 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PPQY
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15162
Phospholipid scramblase 1
ITCH
22:25
PPQY
ITCH,NEDD4
0.9984
More...
O43809
Cleavage and polyadenylation specificity factor subunit 5
ITCH
155:158
PPQY
ITCH,NEDD4
0.5897
More...
O75791
GRB2-related adapter protein 2
ITCH
204:207
PPQY
ITCH,NEDD4
0.675
More...
P10153
Non-secretory ribonuclease
ITCH
147:150
PPQY
ITCH,NEDD4
0.8403
More...
P35680
Hepatocyte nuclear factor 1-beta
ITCH
519:522
PPQY
ITCH,NEDD4
0.9746
More...
P47902
Homeobox protein CDX-1
ITCH
39:42
PPQY
ITCH,NEDD4
0.9834
More...
Q15751
Probable E3 ubiquitin-protein ligase HERC1
ITCH
4383:4386
PPQY
ITCH,NEDD4
0.6066
More...
Q16650
T-box brain protein 1
ITCH
550:553
PPQY
ITCH,NEDD4
0.9804
More...
Q24JP5
Transmembrane protein 132A
ITCH
244:247
PPQY
ITCH,NEDD4
0.8056
More...
Q5JTH9
RRP12-like protein
ITCH
1209:1212
PPQY
ITCH,NEDD4
0.8336
More...
Q68CP9
AT-rich interactive domain-containing protein 2
ITCH
850:853
PPQY
ITCH,NEDD4
0.9824
More...
Q71SY5
Mediator of RNA polymerase II transcription subunit 25
ITCH
269:272
PPQY
ITCH,NEDD4
0.9206
More...
Q8IVH2
Forkhead box protein P4
ITCH
628:631
PPQY
ITCH,NEDD4
0.899
More...
Q8NFD5
AT-rich interactive domain-containing protein 1B
ITCH
581:584
PPQY
ITCH,NEDD4
0.8798
More...
Q8TB72
Pumilio homolog 2
ITCH
342:345
PPQY
ITCH,NEDD4
0.751
More...
Q92585
Mastermind-like protein 1
ITCH
670:673
PPQY
ITCH,NEDD4
0.9964
More...
Q96RT1
Erbin
ITCH
974:977
PPQY
ITCH,NEDD4
0.9986
More...
Q99626
Homeobox protein CDX-2
ITCH
34:37
PPQY
ITCH,NEDD4
0.7582
More...
Q9H4A3
Serine/threonine-protein kinase WNK1
ITCH
951:954
PPQY
ITCH,NEDD4
0.9234
More...
Q9H7P6
Multivesicular body subunit 12B
ITCH
173:176
PPQY
ITCH,NEDD4
0.9906
More...
Q9NW97
Transmembrane protein 51
ITCH
236:239
PPQY
ITCH,NEDD4
0.9991
More...
Q9NZ53
Podocalyxin-like protein 2
ITCH
94:97
PPQY
ITCH,NEDD4
0.6559
More...
Q9P0N8
E3 ubiquitin-protein ligase MARCHF2
ITCH
33:36
PPQY
ITCH,NEDD4
0.7278
More...
Q9UHV7
Mediator of RNA polymerase II transcription subunit 13
ITCH
587:590
PPQY
ITCH,NEDD4
0.9964
More...
Q9UPX0
Protein turtle homolog B
ITCH
145:148
PPQY
ITCH,NEDD4
0.7346
More...
Q9Y2J4
Angiomotin-like protein 2
ITCH
210:213
PPQY
ITCH,NEDD4
0.9661
More...
Q5T0L3
Spermatogenesis-associated protein 46
ITCH
53:56
PPQY
ITCH,NEDD4
0.9935
More...
Q86VI1
Exocyst complex component 3-like protein
ITCH
299:302
PPQY
ITCH,NEDD4
0.6459
More...
Q8WUU8
Transmembrane protein 174
ITCH
179:182
PPQY
ITCH,NEDD4
0.9754
More...
Q9ULL0
Acrosomal protein KIAA1210
ITCH
1154:1157
PPQY
ITCH,NEDD4
0.9027
More...
P0CJ78
Zinc finger protein 865
ITCH
74:77
PPQY
ITCH,NEDD4
0.9965
More...