DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VLSSS
Uniprot ID:
Q96P47
Source protein:
Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 3
Source gene:
AGAP3
Class:
DEG_SPOP_SBC_1
Location:
526:530
E3 ligase:
SPOP
DEGRON score:
0.911
ASA_SCORE:
72.46
COIL:
0.7318
CONS_SCORE:
0.259
DSS_SCORE:
0.775
HELIX:
0.1458
FCONS_SCORE:
0.8806
RIG_SCORE:
0.5575
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G527W
TCGA-ER-A19K
SKCM
TCGA
VLSSS
DEG_SPOP_SBC_1
0.7825
p.G527W
DO47672
SKCM
ICGC
VLSSS
DEG_SPOP_SBC_1
0.7825
p.H529Q
TCGA-KB-A6F7
STAD
TCGA
VLSSS
DEG_SPOP_SBC_1
0.7582
p.H529Q
DO50129
STAD
ICGC
VLSSS
DEG_SPOP_SBC_1
0.7582
p.G527V
DO228978
LICA
ICGC
VLSSS
DEG_SPOP_SBC_1
0.7532
p.P527A
DO469
BLCA
ICGC
VLSSS
DEG_SPOP_SBC_1
0.7503
p.S530I
SNU-1040
large_intestine
COSMIC
VLSSS
DEG_SPOP_SBC_1
0.7341
p.G527E
TCGA-XF-AAN7
BLCA
TCGA
VLSSS
DEG_SPOP_SBC_1
0.7199
p.G527E
DO51946
BLCA
ICGC
VLSSS
DEG_SPOP_SBC_1
0.7199
p.A529T
ACH-000754
Lymphoma
CCLE
VLSSS
DEG_SPOP_SBC_1
0.7139
p.A529T
L-428
haematopoietic_and_lymphoid_tissue
COSMIC
VLSSS
DEG_SPOP_SBC_1
0.7139
p.R531C
KM-H2
haematopoietic_and_lymphoid_tissue
COSMIC
VLSSS
DEG_SPOP_SBC_1
0.3056
p.R524H
TCGA-32-2616
GBM
TCGA
VLSSS
DEG_SPOP_SBC_1
0.2778
p.R524H
TCGA-A6-6781
COAD
TCGA
VLSSS
DEG_SPOP_SBC_1
0.2778
p.R524H
DO8447
COAD
ICGC
VLSSS
DEG_SPOP_SBC_1
0.2778
p.R524H
DO13462
GBM
ICGC
VLSSS
DEG_SPOP_SBC_1
0.2778
p.R524C
DO233885
GACA
ICGC
VLSSS
DEG_SPOP_SBC_1
0.2778
p.R532H
DO42033
UCEC
ICGC
VLSSS
DEG_SPOP_SBC_1
0.2778
p.P523L
TCGA-41-2572
GBM
TCGA
VLSSS
DEG_SPOP_SBC_1
0.25
p.P523L
DO11465
GBM
ICGC
VLSSS
DEG_SPOP_SBC_1
0.25
p.A522T
DO233766
GACA
ICGC
VLSSS
DEG_SPOP_SBC_1
0.2222
p.G522V
DO228952
LICA
ICGC
VLSSS
DEG_SPOP_SBC_1
0.2222
p.G522D
SIDM01032
Esophageal Squamous Cell Carcinoma
GDSC
VLSSS
DEG_SPOP_SBC_1
0.2222
p.G522D
ACH-000823
Esophageal Cancer
CCLE
VLSSS
DEG_SPOP_SBC_1
0.2222
p.G522D
KYSE-140
oesophagus
COSMIC
VLSSS
DEG_SPOP_SBC_1
0.2222
Showing 1 to 25 of 35 entries
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Drug responses associated with AGAP3 mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
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All proteins holding degron of VLSSS
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9P212
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase epsilon-1
DEG_SPOP_SBC_1
1175:1179
VLSSS
SPOP
0.9697
More...
P25054
Adenomatous polyposis coli protein
DEG_SPOP_SBC_1
291:295
VLSSS
SPOP
0.9986
More...
Q8TCU4
Alstrom syndrome protein 1
DEG_SPOP_SBC_1
570:574
VLSSS
SPOP
0.9598
More...
Q96P47
Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 3
DEG_SPOP_SBC_1
526:530
VLSSS
SPOP
0.911
More...
Q9H329
Band 4.1-like protein 4B
DEG_SPOP_SBC_1
477:481
VLSSS
SPOP
0.9088
More...
Q6UUV7
CREB-regulated transcription coactivator 3
DEG_SPOP_SBC_1
341:345
VLSSS
SPOP
0.9871
More...
Q9UKG1
DCC-interacting protein 13-alpha
DEG_SPOP_SBC_1
687:691
VLSSS
SPOP
0.9973
More...
Q9NS91
E3 ubiquitin-protein ligase RAD18
DEG_SPOP_SBC_1
430:434
VLSSS
SPOP
0.99
More...
Q6ZVF9
G protein-regulated inducer of neurite outgrowth 3
DEG_SPOP_SBC_1
177:181
VLSSS
SPOP
0.8195
More...
O00182
Galectin-9
DEG_SPOP_SBC_1
37:41
VLSSS
SPOP
0.6739
More...
Q3B8N2
Galectin-9B
DEG_SPOP_SBC_1
37:41
VLSSS
SPOP
0.6051
More...
Q8WUI4
Histone deacetylase 7
DEG_SPOP_SBC_1
505:509
VLSSS
SPOP
0.9515
More...
Q96EB6
NAD-dependent protein deacetylase sirtuin-1
DEG_SPOP_SBC_1
665:669
VLSSS
SPOP
0.888
More...
O75113
NEDD4-binding protein 1
DEG_SPOP_SBC_1
254:258
VLSSS
SPOP
0.9995
More...
Q15149
Plectin
DEG_SPOP_SBC_1
978:982
VLSSS
SPOP
0.6246
More...
Q8NDX5
Polyhomeotic-like protein 3
DEG_SPOP_SBC_1
225:229
VLSSS
SPOP
0.993
More...
Q14671
Pumilio homolog 1
DEG_SPOP_SBC_1
225:229
VLSSS
SPOP
0.9888
More...
Q8TB72
Pumilio homolog 2
DEG_SPOP_SBC_1
98:102
VLSSS
SPOP
0.9847
More...
Q96QF0
Rab-3A-interacting protein
DEG_SPOP_SBC_1
259:263
VLSSS
SPOP
0.9939
More...
Q6IAA8
Ragulator complex protein LAMTOR1
DEG_SPOP_SBC_1
94:98
VLSSS
SPOP
0.5049
More...
P98175
RNA-binding protein 10
DEG_SPOP_SBC_1
325:329
VLSSS
SPOP
0.7807
More...
Q9H4A3
Serine/threonine-protein kinase WNK1
DEG_SPOP_SBC_1
1894:1898
VLSSS
SPOP
0.9125
More...
A6NMB1
Sialic acid-binding Ig-like lectin 16
DEG_SPOP_SBC_1
277:281
VLSSS
SPOP
0.7762
More...
Q07890
Son of sevenless homolog 2
DEG_SPOP_SBC_1
1276:1280
VLSSS
SPOP
0.9839
More...
Q15572
TATA box-binding protein-associated factor RNA polymerase I subunit C
DEG_SPOP_SBC_1
854:858
VLSSS
SPOP
0.893
More...
Showing 1 to 25 of 32 entries
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