Search results: The pahtway p2378 has 77 genes in the original annotation. Currently, there are 60 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group ? Functional group ?
10133OPTNALS12 | FIP2 | GLC1E | HIP7 | HYPL | NRP | TFIIIA-INTPoptineurin10p13CV:PGCnp
DMG:Nishioka_2013
7431VIMCTRCT30 | HEL113vimentin10p13CV:PGCnp
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
960CD44CDW44 | CSPG8 | ECMR-III | HCELL | HUTCH-I | IN | LHR | MC56 | MDU2 | MDU3 | MIC4 | Pgp1CD44 molecule (Indian blood group)11p13CV:GWASdb
DMG:Jaffe_2016
DMG:Wockner_2014
Expression
Network
10553HTATIP2CC3 | SDR44U1 | TIP30HIV-1 Tat interactive protein 211p15.1CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
6609SMPD1ASM | ASMASE | NPDsphingomyelin phosphodiesterase 111p15.4-p15.1ADT:Sun_2012
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
1028CDKN1CBWCR | BWS | KIP2 | WBS | p57 | p57Kip2cyclin-dependent kinase inhibitor 1C11p15.5CV:PGCnp
DMG:Nishioka_2013
DMG:vanEijk_2014
DMG:Wockner_2014
PMID:cooccur
3665IRF7IMD39 | IRF-7H | IRF7A | IRF7B | IRF7C | IRF7Hinterferon regulatory factor 711p15.5CV:PGCnp
PMID:cooccur
595CCND1BCL1 | D11S287E | PRAD1 | U21B31cyclin D111q13DMG:Jaffe_2016
Network
PMID:cooccur
4312MMP1CLG | CLGNmatrix metallopeptidase 111q22.3PMID:cooccur
5869RAB5B-RAB5B, member RAS oncogene family12q13CV:PGCnp
DMG:Wockner_2014
INTRACELLULAR TRAFFICKING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
3458IFNGIFG | IFIinterferon, gamma12q14CV:GWAScat
CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
4193MDM2ACTFS | HDMX | hdm2MDM2 proto-oncogene12q14.3-q15CV:PGCnp
Network
PMID:cooccur
3621ING1p24ING1c | p33 | p33ING1 | p33ING1b | p47 | p47ING1ainhibitor of growth family member 113q34CV:PGCnp
CV:PheWAS
DMG:Jaffe_2016
3306HSPA2HSP70-2 | HSP70-3heat shock protein family A (Hsp70) member 214q24.1CV:PGCnp
PMID:cooccur
CompositeSet
7127TNFAIP2B94 | EXOC3L3TNF alpha induced protein 214q32CV:PGCnp
DEG:Zhao_2015
4692NDNHsT16328 | PWCRnecdin, MAGE family member15q11.2CNV:YES
CV:PGCnp
GO_Annotation
7057THBS1THBS | THBS-1 | TSP | TSP-1 | TSP1thrombospondin 115q15CV:PGCnp
DNM:Xu_2012
PMID:cooccur
CompositeSet
220ALDH1A3ALDH1A6 | ALDH6 | MCOP8 | RALDH3aldehyde dehydrogenase 1 family member A315q26.3CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
7041TGFB1I1ARA55 | HIC-5 | HIC5 | TSC-5transforming growth factor beta 1 induced transcript 116p11.2CV:PGCnp
DMG:Wockner_2014
GSMA_IIE
5934RBL2P130 | Rb2retinoblastoma-like 216q12.2CV:PGCnp
81631MAP1LC3BATG8F | LC3B | MAP1A/1BLC3 | MAP1LC3B-amicrotubule associated protein 1 light chain 3 beta16q24.2CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
7157TP53BCC7 | LFS1 | P53 | TRP53tumor protein p5317p13.1Association
Core
CV:PGCnp
GO_Annotation
GR_COR
GR_Ng
GR_WM
Network
PMID:cooccur
5606MAP2K3MAPKK3 | MEK3 | MKK3 | PRKMK3 | SAPKK-2 | SAPKK2mitogen-activated protein kinase kinase 317q11.2CV:PGCnpG2Cdb.humanNRC
G2Cdb.humanPSP
Potential synaptic genes
3487IGFBP4BP-4 | HT29-IGFBP | IBP4 | IGFBP-4insulin like growth factor binding protein 417q21.2CV:PGCnp
PMID:cooccur
4831NME2NDKB | NDPK-B | NDPKB | NM23-H2 | NM23B | PUFNME/NM23 nucleoside diphosphate kinase 217q21.3CV:PGCnp
Network
CELL METABOLISM
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
64750SMURF2-SMAD specific E3 ubiquitin protein ligase 217q22-q23CV:PGCnp
DMG:Jaffe_2016
11031RAB31Rab22BRAB31, member RAS oncogene family18p11.3CV:PGCnp
DMG:vanEijk_2014
DMG:Wockner_2014
Expression
INTRACELLULAR TRAFFICKING
5055SERPINB2HsT1201 | PAI | PAI-2 | PAI2 | PLANH2serpin peptidase inhibitor, clade B (ovalbumin), member 218q21.3DMG:Wockner_2014
GO_Annotation
6237RRAS-related RAS viral (r-ras) oncogene homolog19q13.33CV:PGCnp
DMG:Wockner_2014
2152F3CD142 | TF | TFAcoagulation factor III, tissue factor1p22-p21CV:PGCnp
PMID:cooccur
6282S100A11HEL-S-43 | MLN70 | S100CS100 calcium binding protein A111q21CV:PGCnp
GO_Annotation
GSMA_I
GSMA_IIA
PMID:cooccur
8682PEA15HMAT1 | HUMMAT1H | MAT1 | MAT1H | PEA-15 | PEDphosphoprotein enriched in astrocytes 151q21.1CV:PGCnp
GSMA_I
GSMA_IIA
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
CompositeSet
5872RAB13GIG4RAB13, member RAS oncogene family1q21.2CV:PGCnp
GO_Annotation
GSMA_I
GSMA_IIA
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
2987GUK1GMKguanylate kinase 11q32-q41CV:PGCnp
DMG:Wockner_2014
8894EIF2S2EIF2 | EIF2B | EIF2beta | PPP1R67 | eIF-2-betaeukaryotic translation initiation factor 2 subunit beta20q11.2CV:PGCnp
Network
Ascano FMRP targets
6647SOD1ALS | ALS1 | HEL-S-44 | IPOA | SOD | hSod1 | homodimersuperoxide dismutase 1, soluble21q22.11CV:PGCnp
GO_Annotation
PMID:cooccur
1545CYP1B1CP1B | CYPIB1 | GLC3A | P4501B1cytochrome P450 family 1 subfamily B member 12p22.2CV:PGCnpG2Cdb.humanPSD
G2Cdb.humanPSP
388RHOBARH6 | ARHB | MST081 | MSTP081 | RHOH6ras homolog family member B2p24CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
CompositeSet
Darnell FMRP targets
6772STAT1CANDF7 | IMD31A | IMD31B | IMD31C | ISGF-3 | STAT91signal transducer and activator of transcription 12q32.2CV:PGCnp
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
2335FN1CIG | ED-B | FINC | FN | FNZ | GFND | GFND2 | LETS | MSFfibronectin 12q34CV:PGCnp
DNM:Fromer_2014
DNM:Guipponi_2014
GR_Ng
GSMA_IIA
GSMA_IIE
PMID:cooccur
CompositeSet
3485IGFBP2IBP2 | IGF-BP53insulin like growth factor binding protein 22q35CV:PGCnp
DMG:Jaffe_2016
GSMA_IIA
GSMA_IIE
PMID:cooccur
3490IGFBP7AGM | FSTL2 | IBP-7 | IGFBP-7 | IGFBP-7v | IGFBPRP1 | MAC25 | PSF | RAMSVPS | TAFinsulin like growth factor binding protein 74q12CV:PGCnp
DMG:Wockner_2014
11082ESM1endocanendothelial cell specific molecule 15q11.2CV:PGCnp
9547CXCL14BMAC | BRAK | KEC | KS1 | MIP-2g | MIP2G | NJAC | SCYB14C-X-C motif chemokine ligand 145q31CV:PGCnp
DMG:Wockner_2014
GSMA_I
1212CLTBLCBclathrin light chain B5q35CV:PGCnp
DMG:Jaffe_2016
DMG:vanEijk_2014
GSMA_IIA
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
1026CDKN1ACAP20 | CDKN1 | CIP1 | MDA-6 | P21 | SDI1 | WAF1 | p21CIP1cyclin-dependent kinase inhibitor 1A6p21.2CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIE
Network
PMID:cooccur
5863RGL2HKE1.5 | KE1.5 | RAB2Lral guanine nucleotide dissociation stimulator like 26p21.3CV:PGCnp
DNM:Fromer_2014
GSMA_I
CompositeSet
7020TFAP2AAP-2 | AP-2alpha | AP2TF | BOFS | TFAP2transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)6p24CV:PGCnp
DMG:Wockner_2014
GSMA_I
Network
7128TNFAIP3A20 | AISBL | OTUD7C | TNFA1P2TNF alpha induced protein 36q23CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
10767HBS1LEF-1a | ERFS | HBS1 | HSPC276 | eRF3cHBS1 like translational GTPase6q23.3CV:PGCnp
DMG:Jaffe_2016
3486IGFBP3BP-53 | IBP3insulin like growth factor binding protein 37p12.3CV:PGCnp
PMID:cooccur
5879RAC1MIG5 | Rac-1 | TC-25 | p21-Rac1ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)7p22CV:PGCnp
DMG:Wockner_2014
Network
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Potential synaptic genes
1278COL1A2OI4collagen type I alpha 27q22.1CV:GWASdb
CV:PGCnp
5054SERPINE1PAI | PAI-1 | PAI1 | PLANH1serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 17q22.1CV:PGCnp
DMG:Nishioka_2013
GO_Annotation
26136TESTESS | TESS-2testin LIM domain protein7q31.2CV:PGCnp
PMID:cooccur
3663IRF5SLEB10interferon regulatory factor 57q32CV:PGCnp
PMID:cooccur
3084NRG1ARIA | GGF | GGF2 | HGL | HRG | HRG1 | HRGA | MST131 | MSTP131 | NDF | NRG1-IT2 | SMDFneuregulin 18p12Association
Core
CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
GR_COR
GR_Ng
GR_WM
GSMA_IIA
GSMA_IIE
Network
PMID:cooccur
NEUROTROPHIN SIGNALING
1029CDKN2AARF | CDK4I | CDKN2 | CMM2 | INK4 | INK4A | MLM | MTS-1 | MTS1 | P14 | P14ARF | P16 | P16-INK4A | P16INK4 | P16INK4A | P19 | P19ARF | TP16cyclin-dependent kinase inhibitor 2A9p21CV:PGCnp
DMG:Nishioka_2013
Network
84909C9orf3AOPEP | AP-O | APO | C90RF3 | ONPEPchromosome 9 open reading frame 39q22.32CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
2934GSNADF | AGELgelsolin9q33CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanNRC
CompositeSet
Potential synaptic genes