Search results: The pahtway p3080 has 108 genes in the original annotation. Currently, there are 71 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group ? Functional group ?
7431VIMCTRCT30 | HEL113vimentin10p13CV:PGCnp
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
27063ANKRD1ALRP | C-193 | CARP | CVARP | MCARP | bA320F15.2ankyrin repeat domain 110q23.31CV:PGCnp
PMID:cooccur
4005LMO2RBTN2 | RBTNL1 | RHOM2 | TTG2LIM domain only 211p13CV:PGCnp
DMG:Jaffe_2016
627BDNFANON2 | BULN2brain-derived neurotrophic factor11p13Association
CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
GR_COR
GR_Ng
GR_WM
PMID:cooccur
NEUROTROPHIN SIGNALING
Potential synaptic genes
4312MMP1CLG | CLGNmatrix metallopeptidase 111q22.3PMID:cooccur
4314MMP3CHDS6 | MMP-3 | SL-1 | STMY | STMY1 | STR1matrix metallopeptidase 311q22.3PMID:cooccur
4837NNMT-nicotinamide N-methyltransferase11q23.1CV:PGCnp
GSMA_I
PMID:cooccur
7070THY1CD90 | CDw90Thy-1 cell surface antigen11q23.3DMG:Wockner_2014
GO_Annotation
GSMA_I
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
4256MGPGIG36 | MGLAP | NTImatrix Gla protein12p12.3PMID:cooccur
7450VWFF8VWF | VWDvon Willebrand factor12p13.3CV:PGCnp
Expression
PMID:cooccur
928CD9BTCC-1 | DRAP-27 | MIC3 | MRP-1 | TSPAN-29 | TSPAN29CD9 molecule12p13.3CV:PGCnp
DMG:Wockner_2014
GO_Annotation
3164NR4A1GFRP1 | HMR | N10 | NAK-1 | NGFIB | NP10 | NUR77 | TR3nuclear receptor subfamily 4 group A member 112q13CV:PGCnp
Network
PMID:cooccur
3855KRT7CK7 | K2C7 | K7 | SCLkeratin 712q13.13CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
7374UNGDGU | HIGM4 | HIGM5 | UDG | UNG1 | UNG15 | UNG2uracil DNA glycosylase12q23-q24.1CV:PGCnp
5564PRKAB1AMPK | HAMPKbprotein kinase AMP-activated non-catalytic subunit beta 112q24.1-q24.3CV:PGCnp
Network
PMID:cooccur
2308FOXO1FKH1 | FKHR | FOXO1Aforkhead box O113q14.1CV:PGCnp
DMG:Montano_2016
DNM:Guipponi_2014
Network
PMID:cooccur
8847DLEU21B4 | BCMSUN | DLB2 | LEU2 | LINC00022 | MIR15AHG | NCRNA00022 | RFP2OS | TRIM13OSdeleted in lymphocytic leukemia 2 (non-protein coding)13q14.3CV:PGCnp
DMG:Wockner_2014
Expression
PMID:cooccur
4860PNPNP | PRO1837 | PUNPpurine nucleoside phosphorylase14q13.1CV:GWAScat
GSMA_I
Network
PMID:cooccur
652BMP4BMP2B | BMP2B1 | MCOPS6 | OFC11 | ZYMEbone morphogenetic protein 414q22-q23CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
22795NID2NID-2nidogen 214q22.1CV:PGCnp
DMG:Wockner_2014
5228PGFD12S1900 | PGFL | PLGF | PlGF-2 | SHGC-10760placental growth factor14q24.3CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
3073HEXATSDhexosaminidase subunit alpha15q24.1CV:PGCnp
GO_Annotation
PMID:cooccur
4313MMP2CLG4 | CLG4A | MMP-2 | MMP-II | MONA | TBE-1matrix metallopeptidase 216q12.2CV:PGCnp
Network
PMID:cooccur
3291HSD11B2AME | AME1 | HSD11K | HSD2 | SDR9C3hydroxysteroid (11-beta) dehydrogenase 216q22CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
PMID:cooccur
463ZFHX3ATBF1 | ATBT | ZNF927zinc finger homeobox 316q22.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
6354CCL7FIC | MARC | MCP-3 | MCP3 | NC28 | SCYA6 | SCYA7C-C motif chemokine ligand 717q11.2-q12Network
PMID:cooccur
6347CCL2GDCF-2 | HC11 | HSMCR30 | MCAF | MCP-1 | MCP1 | SCYA2 | SMC-CFC-C motif chemokine ligand 217q11.2-q12CV:PGCnp
Expression
PMID:cooccur
5142PDE4BDPDE4 | PDEIVBphosphodiesterase 4B1p31Association
CV:GWASdb
CV:PGCnp
GR_Ng
GSMA_IIA
Network
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
2517FUCA1FUCAfucosidase, alpha-L- 1, tissue1p34CV:PGCnp
DMG:Wockner_2014
2275FHL3SLIM2four and a half LIM domains 31p34CV:PGCnp
DMG:Nishioka_2013
7075TIE1JTK14 | TIEtyrosine kinase with immunoglobulin like and EGF like domains 11p34-p33CV:PGCnp
GO_Annotation
2701GJA4CX37gap junction protein alpha 41p35.1CV:GWAScat
CV:GWASdb
CV:PGCnp
8490RGS5MST092 | MST106 | MST129 | MSTP032 | MSTP092 | MSTP106 | MSTP129regulator of G-protein signaling 51q23.1CV:PGCnp
GSMA_IIA
Network
PMID:cooccur
947CD34-CD34 molecule1q32CV:GWASdb
CV:PGCnp
PMID:cooccur
2952GSTT1-glutathione S-transferase theta 122q11.23Association
GSMA_I
PMID:cooccur
5905RANGAP1Fug1 | RANGAP | SDRan GTPase activating protein 122q13CV:PGCnp
PMID:cooccur
5816PVALBD22S749parvalbumin22q13.1CV:PGCnp
GO_Annotation
PMID:cooccur
9978RBX1BA554C12.1 | RNF75 | ROC1ring-box 1, E3 ubiquitin protein ligase22q13.2CV:GWASdb
CV:PGCnp
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
9801MRPL19L19mt | MRP-L15 | MRP-L19 | MRPL15 | RLX1 | RPML15mitochondrial ribosomal protein L192p11.1-q11.2CV:PGCnp
DMG:Jaffe_2016
DMG:Montano_2016
119ADD2ADDBadducin 22p13.3CV:PGCnp
Network
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_mGluR5
CompositeSet
Potential synaptic genes
10199MPHOSPH10CT90 | MPP10 | MPP10P | PPP1R106M-phase phosphoprotein 102p13.3CV:PGCnp
DMG:Jaffe_2016
2202EFEMP1DHRD | DRAD | FBLN3 | FBNL | FIBL-3 | MLVT | MTLV | S1-5EGF containing fibulin-like extracellular matrix protein 12p16CV:PGCnp
PMID:cooccur
388RHOBARH6 | ARHB | MST081 | MSTP081 | RHOH6ras homolog family member B2p24CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
CompositeSet
Darnell FMRP targets
7852CXCR4CD184 | D2S201E | FB22 | HM89 | HSY3RR | LAP-3 | LAP3 | LCR1 | LESTR | NPY3R | NPYR | NPYRL | NPYY3R | WHIM | WHIMSC-X-C motif chemokine receptor 42q21CV:GWASdb
CV:PGCnp
GO_Annotation
GSMA_I
GSMA_IIA
PMID:cooccur
2191FAPDPPIV | FAPA | SIMPfibroblast activation protein alpha2q23CV:PGCnp
GO_Annotation
GSMA_IIA
PMID:cooccur
6670SP3SPR2Sp3 transcription factor2q31CV:PGCnp
Network
PMID:cooccur
3357HTR2B5-HT(2B) | 5-HT-2B | 5-HT2B5-hydroxytryptamine receptor 2B2q36.3-q37.1ADT:Sun_2012
GO_Annotation
PMID:cooccur
GPCR SIGNALLING
5021OXTROT-Roxytocin receptor3p25CV:PGCnp
Expression
PMID:cooccur
Potential synaptic genes
84925DIRC2RCC4disrupted in renal carcinoma 23q21.1CV:PGCnp
8743TNFSF10APO2L | Apo-2L | CD253 | TL2 | TNLG6A | TRAILtumor necrosis factor superfamily member 103q26CV:PGCnp
DMG:vanEijk_2014
PMID:cooccur
2919CXCL1FSP | GRO1 | GROa | MGSA | MGSA-a | NAP-3 | SCYB1C-X-C motif chemokine ligand 14q21CV:PGCnp
GO_Annotation
PMID:cooccur
9037SEMA5ASEMAF | semFsemaphorin 5A5p15.2CV:PGCnp
DMG:Wockner_2014
GO_Annotation
1462VCANCSPG2 | ERVR | GHAP | PG-M | WGN | WGN1versican5q14.3CV:PGCnp
DMG:Jaffe_2016
Expression
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Ascano FMRP targets
5292PIM1PIMPim-1 proto-oncogene, serine/threonine kinase6p21.2CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
GSMA_I
GSMA_IIE
10537UBDFAT10 | GABBR1 | UBD-3ubiquitin D6p21.3CV:PGCnp
PMID:cooccur
654BMP6VGR | VGR1bone morphogenetic protein 66p24-p23CV:PGCnp
GSMA_I
PMID:cooccur
2099ESR1ER | ESR | ESRA | ESTRR | Era | NR3A1estrogen receptor 16q25.1CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Expression
Network
PMID:cooccur
3486IGFBP3BP-53 | IBP3insulin like growth factor binding protein 37p12.3CV:PGCnp
PMID:cooccur
5898RALARALv-ral simian leukemia viral oncogene homolog A (ras related)7p15-p13CV:PGCnp
DMG:Jaffe_2016
Network
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Potential synaptic genes
2006ELNSVAS | WBS | WSelastin7q11.23CNV:YES
CV:PGCnp
GO_Annotation
8910SGCEDYT11 | ESGsarcoglycan epsilon7q21.3CV:PGCnp
1278COL1A2OI4collagen type I alpha 27q22.1CV:GWASdb
CV:PGCnp
4232MESTPEG1mesoderm specific transcript7q32CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
DNM:Ambalavanan_2016
PMID:cooccur
285ANGPT2AGPT2 | ANG2angiopoietin 28p23.1CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
8836GGHGHgamma-glutamyl hydrolase8q12.3CV:PGCnp
DMG:Jaffe_2016
2669GEMKIRGTP binding protein overexpressed in skeletal muscle8q13-q21CV:PGCnp
PMID:cooccur
4920ROR2BDB | BDB1 | NTRKR2receptor tyrosine kinase-like orphan receptor 29q22CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Ascano FMRP targets
53358SHC3N-Shc | NSHC | RAI | SHCCSHC (Src homology 2 domain containing) transforming protein 39q22.1CV:PGCnp
GO_Annotation
2203FBP1FBPfructose-bisphosphatase 19q22.3CV:GWASdb
CV:PGCnp
PMID:cooccur
6303SAT1DC21 | KFSD | KFSDX | SAT | SSAT | SSAT-1spermidine/spermine N1-acetyltransferase 1Xp22.1CV:PGCnp
PMID:cooccur
Potential synaptic genes
4694NDUFA1CI-MWFE | MWFE | ZNF183NADH:ubiquinone oxidoreductase subunit A1Xq24PMID:cooccur