Search results: The pahtway p3562 has 228 genes in the original annotation. Currently, there are 114 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group ? Functional group ?
51363CHST15BRAG | GALNAC4S-6STcarbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 1510q26CV:GWASdb
CV:PGCnp
GSMA_IIA
960CD44CDW44 | CSPG8 | ECMR-III | HCELL | HUTCH-I | IN | LHR | MC56 | MDU2 | MDU3 | MIC4 | Pgp1CD44 molecule (Indian blood group)11p13CV:GWASdb
DMG:Jaffe_2016
DMG:Wockner_2014
Expression
Network
10083USH1CAIE-75 | DFNB18 | DFNB18A | NY-CO-37 | NY-CO-38 | PDZ-45 | PDZ-73 | PDZ-73/NY-CO-38 | PDZ73 | PDZD7C | ush1cpstUSH1 protein network component harmonin11p14.3CV:PGCnp
4925NUCB2HEL-S-109 | NEFAnucleobindin 211p15.1CV:GWASdb
CV:PGCnp
7275TUBRDOB | rd5tubby bipartite transcription factor11p15.5CV:PGCnp
DNM:Xu_2012
CompositeSet
710SERPING1C1IN | C1INH | C1NH | HAE1 | HAE2serpin peptidase inhibitor, clade G (C1 inhibitor), member 111q12.1CV:PGCnp
Expression
10413YAP1COB1 | YAP | YAP2 | YAP65 | YKIYes associated protein 111q13CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
Expression
Network
338699ANKRD42PPP1R79 | SARPankyrin repeat domain 4211q14.1CV:PGCnp
5965RECQLRECQL1 | RecQ1RecQ like helicase12p12DMG:Jaffe_2016
51026GOLT1BCGI-141 | GCT2 | GOT1 | GOT1B | YMR292Wgolgi transport 1B12p12.1CV:PGCnp
121504HIST4H4H4/phistone cluster 4, H412p12.3CV:PGCnp
55810FOXJ2FHXforkhead box J212p13.31CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
6334SCN8ACERIII | CIAT | EIEE13 | MED | NaCh6 | Nav1.6 | PN4sodium voltage-gated channel alpha subunit 812q13CV:PGCnp
GO_Annotation
PMID:cooccur
EXCITABILITY
CompositeSet
Darnell FMRP targets
4618MYF6CNM3 | MRF4 | bHLHc4 | myf-6myogenic factor 612q21CV:PGCnp
DMG:Wockner_2014
GO_Annotation
144455E2F7-E2F transcription factor 712q21.2CV:PGCnp
DMG:Wockner_2014
400058MKRN9PMKRN5 | MKRN9 | MKRNP6 | RNF65 | ZNF127L3makorin ring finger protein 9, pseudogene12q21.32CV:PGCnp
92293TMEM132CPPP1R152transmembrane protein 132C12q24.32CV:PGCnp
51761ATP8A2ATP | ATPIB | CAMRQ4 | IB | ML-1ATPase phospholipid transporting 8A213q12CV:GWAScat
CV:GWASdb
CV:PGCnp
Ascano FMRP targets
10082GPC6OMIMD1glypican 613q32CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
PMID:cooccur
1690COCHCOCH-5B2 | COCH5B2 | DFNA9cochlin14q11.2-q13CV:PGCnp
DEG:Sanders_2013
GSMA_I
23256SCFD1C14orf163 | RA410 | SLY1 | SLY1P | STXBP1L2sec1 family domain containing 114q12CV:PGCnp
GSMA_I
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
CompositeSet
652BMP4BMP2B | BMP2B1 | MCOPS6 | OFC11 | ZYMEbone morphogenetic protein 414q22-q23CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
80757TMEM121holetransmembrane protein 12114q32.33CV:PGCnp
DMG:Wockner_2014
7301TYRO3BYK | Dtk | Etk-2 | RSE | Rek | Sky | TifTYRO3 protein tyrosine kinase15q15CV:PGCnp
GO_Annotation
PMID:cooccur
4916NTRK3GP145-TrkC | TRKC | gp145(trkC)neurotrophic tyrosine kinase, receptor, type 315q25CV:GWAScat
CV:GWASdb
CV:PGCnp
GO_Annotation
Network
PMID:cooccur
CompositeSet
Darnell FMRP targets
57188ADAMTSL3ADAMTSL-3ADAMTS like 315q25.2CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
PMID:cooccur
283820NOMO2Nomo | PM5NODAL modulator 216p12.3GSMA_IIE
23420NOMO1Nomo | PM5NODAL modulator 116p13.11CV:PGCnp
GSMA_IIE
CompositeSet
Darnell FMRP targets
54715RBFOX12BP1 | A2BP1 | FOX-1 | FOX1 | HRNBP1RNA binding protein, fox-1 homolog (C. elegans) 116p13.3CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
Expression
Network
PMID:cooccur
Potential synaptic genes
80205CHD9AD013 | CHD-9 | CReMM | KISH2 | PRIC320chromodomain helicase DNA binding protein 916q12.2CV:PGCnp
DMG:Jaffe_2016
146225CMTM2CKLFSF2CKLF like MARVEL transmembrane domain containing 216q21CV:PGCnp
10164CHST4GST3 | GlcNAc6ST2 | HECGLCNAC6ST | LSSTcarbohydrate (N-acetylglucosamine 6-O) sulfotransferase 416q22.2CV:PGCnp
463ZFHX3ATBF1 | ATBT | ZNF927zinc finger homeobox 316q22.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
388336SHISA6-shisa family member 617p12CV:PGCnp
79990PLEKHH3-pleckstrin homology, MyTH4 and FERM domain containing H317q21.2CV:PGCnp
DMG:Nishioka_2013
23253ANKRD12ANCO-2 | ANCO1 | GAC-1 | Nbla00144ankyrin repeat domain 1218p11.22CV:GWASdb
CV:PGCnp
1837DTNAD18S892E | DRP3 | DTN | DTN-A | LVNC1dystrobrevin alpha18q12CV:GWASdb
CV:PGCnp
GO_Annotation
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
83473KATNAL2-katanin p60 subunit A like 218q21.1CV:PGCnp
CV:PheWAS
94274PPP1R14ACPI-17 | CPI17 | PPP1INLprotein phosphatase 1 regulatory inhibitor subunit 14A19q13.1CV:PGCnp
DMG:Wockner_2014
92283ZNF461GIOT-1 | GIOT1 | HZF28zinc finger protein 46119q13.12CV:PGCnp
284359IZUMO1IZUMOizumo sperm-egg fusion 119q13.33CV:PGCnp
PMID:cooccur
26227PHGDH3-PGDH | 3PGDH | HEL-S-113 | NLS | NLS1 | PDG | PGAD | PGD | PGDH | PHGDHD | SERAphosphoglycerate dehydrogenase1p12CV:PGCnp
GO_Annotation
GSMA_I
GSMA_IIA
PMID:cooccur
CELL METABOLISM
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
3749KCNC4C1orf30 | HKSHIIIC | KSHIIIC | KV3.4potassium voltage-gated channel subfamily C member 41p21CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
GSMA_I
EXCITABILITY
9659PDE4DIPCMYA2 | MMGLphosphodiesterase 4D interacting protein1q12CNV:YES
DNM:Fromer_2014
GSMA_I
GSMA_IIA
PMID:cooccur
CompositeSet
Darnell FMRP targets
11189CELF3BRUNOL1 | CAGH4 | ERDA4 | ETR-1 | TNRC4CUGBP, Elav-like family member 31q21CV:PGCnp
GO_Annotation
GSMA_I
GSMA_IIA
PMID:cooccur
325APCSHEL-S-92n | PTX2 | SAPamyloid P component, serum1q21-q23CV:PGCnp
GSMA_I
GSMA_IIA
PMID:cooccur
200030NBPF11NBPF24neuroblastoma breakpoint family member 111q21.1CNV:YES
10216PRG4CACP | HAPO | JCAP | MSF | SZPproteoglycan 41q25-q31CV:PGCnp
PMID:cooccur
5287PIK3C2BC2-PI3Kphosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta1q32CV:PGCnp
DNM:Fromer_2014
CompositeSet
5629PROX1-prospero homeobox 11q41CV:GWASdb
CV:PGCnp
PMID:cooccur
1130LYSTCHS | CHS1lysosomal trafficking regulator1q42.1-q42.2CV:PGCnp
DMG:Wockner_2014
5332PLCB4ARCND2 | PI-PLCphospholipase C beta 420p12CV:PGCnp
GO_Annotation
GSMA_I
PMID:cooccur
CANABINOID
INTRACELLULAR SIGNAL TRANSDUCTION
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
22913RALYHNRPCL2 | P542RALY heterogeneous nuclear ribonucleoprotein20q11.21-q11.23CV:PGCnp
26051PPP1R16BANKRD4 | TIMAPprotein phosphatase 1 regulatory subunit 16B20q11.23CV:GWAScat
CV:PGC128
CV:PGCnp
128553TSHZ2C20orf17 | OVC10-2 | TSH2 | ZABC2 | ZNF218teashirt zinc finger homeobox 220q13.2CV:PGCnp
DNM:Fromer_2014
CompositeSet
337974KRTAP19-7KAP19.7keratin associated protein 19-721q22.1CV:PGCnp
80781COL18A1KNO | KNO1 | KScollagen type XVIII alpha 121q22.3CV:PGCnp
DMG:Wockner_2014
861RUNX1AML1 | AML1-EVI-1 | AMLCR1 | CBF2alpha | CBFA2 | EVI-1 | PEBP2aB | PEBP2alpharunt related transcription factor 121q22.3CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
PMID:cooccur
150160CCT8L2CESK1chaperonin containing TCP1 subunit 8 like 222q11.1CV:PGCnp
DNM:Fromer_2014
GSMA_I
CompositeSet
23780APOL2APOL-II | APOL3apolipoprotein L222q12CV:PGCnp
GO_Annotation
PMID:cooccur
CompositeSet
91445RNF185-ring finger protein 18522q12.2CV:PGCnp
GSMA_I
171568POLR3HRPC22.9 | RPC8polymerase (RNA) III subunit H22q13.2CV:PGCnp
9111NMI-N-myc and STAT interactor2q23CV:PGCnp
GSMA_IIA
PMID:cooccur
23314SATB2GLSSSATB homeobox 22q33CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
Chromatin Remodeling Genes
57456KIAA1143-KIAA11433p21.31CV:PGCnp
185AGTR1AG2S | AGTR1B | AT1 | AT1AR | AT1B | AT1BR | AT1R | AT2R1 | HAT1Rangiotensin II receptor type 13q24CV:PGCnp
DMG:Jaffe_2016
1400CRMP1CRMP-1 | DPYSL1 | DRP-1 | DRP1 | ULIP-3collapsin response mediator protein 14p16.1CV:PGCnp
GO_Annotation
Network
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
55351STK32BHSA250839 | STK32 | STKG6 | YANK2serine/threonine kinase 32B4p16.2CV:GWASdb
CV:PGCnp
7468WHSC1MMSET | NSD2 | REIIBP | TRX5 | WHSWolf-Hirschhorn syndrome candidate 14p16.3CV:PGCnp
DMG:Wockner_2014
Chromatin Remodeling Genes
65008MRPL1BM022 | L1MT | MRP-L1mitochondrial ribosomal protein L14q21.1CV:PGCnp
DMG:Nishioka_2013
9708PCDHGA8PCDH-GAMMA-A8protocadherin gamma subfamily A, 85q31CV:PGCnp
DMG:Wockner_2014
GSMA_I
PMID:cooccur
5159PDGFRBCD140B | IBGC4 | IMF1 | JTK12 | KOGS | PDGFR | PDGFR-1 | PDGFR1 | PENTTplatelet derived growth factor receptor beta5q33.1CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
30820KCNIP1KCHIP1 | VABPpotassium voltage-gated channel interacting protein 15q35.1CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_IIA
PMID:cooccur
10814CPLX2921-L | CPX-2 | CPX2 | Hfb1complexin 25q35.2Association
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GR_Ng
GSMA_IIA
PMID:cooccur
EXOCYTOSIS
CompositeSet
Darnell FMRP targets
3017HIST1H2BDH2B.1B | H2B/b | H2BFB | HIRIP2 | dJ221C16.6histone cluster 1, H2bd6p21.3CV:PGCnp
DEG:Sanders_2013
GSMA_I
PMID:cooccur
85235HIST1H2AHH2A/S | H2AFALii | H2AH | dJ86C11.1histone cluster 1, H2ah6p21.33CV:PGCnp
GSMA_I
85236HIST1H2BKH2B/S | H2BFAiii | H2BFT | H2BKhistone cluster 1, H2bk6p21.33CV:PGCnp
GSMA_I
8294HIST1H4IH4/m | H4FM | H4Mhistone cluster 1, H4i6p21.33DNM:Fromer_2014
GSMA_I
CompositeSet
8330HIST1H2AKH2A/d | H2AFDhistone cluster 1, H2ak6p22.1CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GSMA_I
8331HIST1H2AJH2A/E | H2AFE | dJ160A22.4histone cluster 1, H2aj6p22.1CV:PGCnp
GSMA_I
8969HIST1H2AGH2A.1b | H2A/p | H2AFP | H2AG | pH2A/fhistone cluster 1, H2ag6p22.1CV:PGCnp
DNM:Xu_2012
Expression
GSMA_I
CompositeSet
8332HIST1H2ALH2A.i | H2A/i | H2AFI | dJ193B12.9histone cluster 1, H2al6p22.1CV:GWASdb
CV:PGCnp
GSMA_I
8970HIST1H2BJH2B/r | H2BFR | H2BJhistone cluster 1, H2bj6p22.1CV:GWASdb
CV:PGCnp
Expression
GSMA_I
PMID:cooccur
8336HIST1H2AMH2A.1 | H2A/n | H2AFN | dJ193B12.1histone cluster 1, H2am6p22.1Expression
GSMA_I
8347HIST1H2BCH2B.1 | H2B/l | H2BFL | dJ221C16.3histone cluster 1, H2bc6p22.1CV:GWASdb
CV:PGCnp
DEG:Sanders_2013
GSMA_I
PMID:cooccur
8348HIST1H2BOH2B.2 | H2B/n | H2BFN | dJ193B12.2histone cluster 1, H2bo6p22.1CV:PGCnp
GSMA_I
8362HIST1H4KH4/d | H4F2iii | H4FD | dJ160A22.1histone cluster 1, H4k6p22.1CV:PGCnp
DEG:Sanders_2013
GSMA_I
PMID:cooccur
8363HIST1H4JH4/e | H4F2iv | H4FE | dJ160A22.2histone cluster 1, H4j6p22.1CV:PGCnp
GSMA_I
8364HIST1H4CH4/g | H4FG | dJ221C16.1histone cluster 1, H4c6p22.1CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_I
8365HIST1H4HH4/h | H4FHhistone cluster 1, H4h6p22.1CV:PGCnp
GSMA_I
8368HIST1H4LH4.k | H4/k | H4FKhistone cluster 1, H4l6p22.1CV:PGCnp
GSMA_I
3012HIST1H2AEH2A.1 | H2A.2 | H2A/a | H2AFAhistone cluster 1, H2ae6p22.2CV:PGCnp
GSMA_I
G2Cdb.humanPSD
G2Cdb.humanPSP
8335HIST1H2ABH2A/m | H2AFMhistone cluster 1, H2ab6p22.2CV:PGCnp
GSMA_I
8339HIST1H2BGH2B.1A | H2B/a | H2BFA | dJ221C16.8histone cluster 1, H2bg6p22.2CV:PGCnp
DEG:Sanders_2013
GSMA_I
PMID:cooccur
8343HIST1H2BFH2B/g | H2BFGhistone cluster 1, H2bf6p22.2CV:PGCnp
GSMA_I
8344HIST1H2BEH2B.h | H2B/h | H2BFH | dJ221C16.8histone cluster 1, H2be6p22.2CV:PGCnp
DNM:Fromer_2014
GSMA_I
CompositeSet
8346HIST1H2BIH2B/k | H2BFKhistone cluster 1, H2bi6p22.2CV:PGCnp
GSMA_I
8359HIST1H4AH4FAhistone cluster 1, H4a6p22.2CV:PGCnp
GSMA_I
G2Cdb.humanPSD
G2Cdb.humanPSP
8360HIST1H4DH4/b | H4FB | dJ221C16.9histone cluster 1, H4d6p22.2CV:PGCnp
GSMA_I
8361HIST1H4FH4 | H4/c | H4FChistone cluster 1, H4f6p22.2CV:PGCnp
GSMA_I
8366HIST1H4BH4/I | H4FIhistone cluster 1, H4b6p22.2CV:PGCnp
GSMA_I
8367HIST1H4EH4/j | H4FJhistone cluster 1, H4e6p22.2CV:PGCnp
GSMA_I
404220C6orf201dJ1013A10.5chromosome 6 open reading frame 2016p25.2CV:PGCnp
GSMA_I
2898GRIK2EAA4 | GLR6 | GLUK6 | GLUR6 | GluK2 | MRT6glutamate ionotropic receptor kainate type subunit 26q16.3Association
CV:GWASdb
CV:PGCnp
GO_Annotation
Network
PMID:cooccur
LIGAND GATED ION SIGNALING
G2Cdb.human_PocklingtonH1
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
Potential synaptic genes
157739TDHSDR14E1PL-threonine dehydrogenase (pseudogene)8p23.1CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
79776ZFHX4ZFH4 | ZHF4zinc finger homeobox 48q21.11CV:PGCnp
1029CDKN2AARF | CDK4I | CDKN2 | CMM2 | INK4 | INK4A | MLM | MTS-1 | MTS1 | P14 | P14ARF | P16 | P16-INK4A | P16INK4 | P16INK4A | P19 | P19ARF | TP16cyclin-dependent kinase inhibitor 2A9p21CV:PGCnp
DMG:Nishioka_2013
Network
85301COL27A1STLScollagen type XXVII alpha 19q32CV:GWASdb
CV:PGCnp
DNM:Fromer_2014
Expression
CompositeSet
11064CNTRLCEP1 | CEP110 | FAN | bA165P4.1centriolin9q33.2CV:PGCnp
9758FRMPD4PDZD10 | PDZK10FERM and PDZ domain containing 4Xp22.2CV:GWASdb
CV:PGCnp
PMID:cooccur
CompositeSet
Darnell FMRP targets
Potential synaptic genes
2925GRPRBB2gastrin releasing peptide receptorXp22.2CV:PGCnp
PMID:cooccur
Potential synaptic genes
27328PCDH11XPCDH-X | PCDH11 | PCDHX | PPP1R119protocadherin 11 X-linkedXq21.3CV:PGCnp
PMID:cooccur
Potential synaptic genes
139741ACTRT1AIP1 | ARIP1 | ARPT1 | HSD27actin-related protein T1Xq25CV:GWASdb
CV:PGCnp
83259PCDH11YPCDH-PC | PCDH22 | PCDHX | PCDHYprotocadherin 11 Y-linkedYp11.2PMID:cooccur