DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
AASST
Uniprot ID:
Q9UHV7
Source protein:
Mediator of RNA polymerase II transcription subunit 13
Source gene:
MED13
Class:
DEG_SPOP_SBC_1
Location:
1509:1513
E3 ligase:
SPOP
DEGRON score:
0.6304
ASA_SCORE:
77.84
COIL:
0.7966
CONS_SCORE:
0.1813
DSS_SCORE:
0.3851
HELIX:
0.1942
FCONS_SCORE:
0.8834
RIG_SCORE:
0.6988
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T1501A
TCGA-A5-A1OF
UCEC
TCGA
AASST
DEG_SPOP_SBC_1
0.1111
p.T1501A
DO42568
UCEC
ICGC
AASST
DEG_SPOP_SBC_1
0.1111
p.P1502A
TCGA-DX-A240
SARC
TCGA
AASST
DEG_SPOP_SBC_1
0.1389
p.P1502A
DO219960
SARC
ICGC
AASST
DEG_SPOP_SBC_1
0.1389
p.A1499V
TCGA-EO-A22U
UCEC
TCGA
AASST
DEG_SPOP_SBC_1
0.0556
p.A1499V
DO43755
UCEC
ICGC
AASST
DEG_SPOP_SBC_1
0.0556
p.A1510V
TCGA-NH-A6GB
COAD
TCGA
AASST
DEG_SPOP_SBC_1
0.5825
p.A1510V
DO50092
COAD
ICGC
AASST
DEG_SPOP_SBC_1
0.5825
p.A1510V
DO230968
LUSC
ICGC
AASST
DEG_SPOP_SBC_1
0.5825
p.A1510V
DO224621
LUSC
ICGC
AASST
DEG_SPOP_SBC_1
0.5825
p.A1499S
DO23270
LINC
ICGC
AASST
DEG_SPOP_SBC_1
0.0556
p.V1516M
SIDM00845
Burkitt's Lymphoma
GDSC
AASST
DEG_SPOP_SBC_1
0.25
p.M1514I
ACH-000901
Lung Cancer
CCLE
AASST
DEG_SPOP_SBC_1
0.3056
Drug responses associated with MED13 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of AASST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A2VDJ0
Transmembrane protein 131-like
DEG_SPOP_SBC_1
993:997
AASST
SPOP
0.9931
More...
P12036
Neurofilament heavy polypeptide
DEG_SPOP_SBC_1
70:74
AASST
SPOP
0.9827
More...
P15976
Erythroid transcription factor
DEG_SPOP_SBC_1
44:48
AASST
SPOP
0.6198
More...
P29966
Myristoylated alanine-rich C-kinase substrate
DEG_SPOP_SBC_1
129:133
AASST
SPOP
0.9228
More...
P35658
Nuclear pore complex protein Nup214
DEG_SPOP_SBC_1
1554:1558
AASST
SPOP
0.9763
More...
P35658
Nuclear pore complex protein Nup214
DEG_SPOP_SBC_1
1774:1778
AASST
SPOP
0.9839
More...
Q00587
Cdc42 effector protein 1
DEG_SPOP_SBC_1
277:281
AASST
SPOP
0.9931
More...
Q02078
Myocyte-specific enhancer factor 2A
DEG_SPOP_SBC_1
169:173
AASST
SPOP
0.6185
More...
Q07687
Homeobox protein DLX-2
DEG_SPOP_SBC_1
18:22
AASST
SPOP
0.9974
More...
Q13516
Oligodendrocyte transcription factor 2
DEG_SPOP_SBC_1
90:94
AASST
SPOP
0.9738
More...
Q15554
Telomeric repeat-binding factor 2
DEG_SPOP_SBC_1
291:295
AASST
SPOP
0.9947
More...
Q15714
TSC22 domain family protein 1
DEG_SPOP_SBC_1
70:74
AASST
SPOP
0.9918
More...
Q15814
Tubulin-specific chaperone C
DEG_SPOP_SBC_1
146:150
AASST
SPOP
0.5577
More...
Q86TM6
E3 ubiquitin-protein ligase synoviolin
DEG_SPOP_SBC_1
553:557
AASST
SPOP
0.9772
More...
Q8IU81
Interferon regulatory factor 2-binding protein 1
DEG_SPOP_SBC_1
455:459
AASST
SPOP
0.8522
More...
Q8NDV7
Trinucleotide repeat-containing gene 6A protein
DEG_SPOP_SBC_1
1097:1101
AASST
SPOP
0.9707
More...
Q96F05
Uncharacterized protein C11orf24
DEG_SPOP_SBC_1
136:140
AASST
SPOP
0.9889
More...
Q96F05
Uncharacterized protein C11orf24
DEG_SPOP_SBC_1
156:160
AASST
SPOP
0.9963
More...
Q96KP1
Exocyst complex component 2
DEG_SPOP_SBC_1
916:920
AASST
SPOP
0.9073
More...
Q96P47
Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 3
DEG_SPOP_SBC_1
320:324
AASST
SPOP
0.9988
More...
Q9BTC0
Death-inducer obliterator 1
DEG_SPOP_SBC_1
1299:1303
AASST
SPOP
0.9885
More...
Q9BXT5
Testis-expressed protein 15
DEG_SPOP_SBC_1
1366:1370
AASST
SPOP
0.5082
More...
Q9BYI3
Hyccin
DEG_SPOP_SBC_1
355:359
AASST
SPOP
0.9992
More...
Q9BZZ2
Sialoadhesin
DEG_SPOP_SBC_1
564:568
AASST
SPOP
0.8123
More...
Q9C0A1
Zinc finger homeobox protein 2
DEG_SPOP_SBC_1
43:47
AASST
SPOP
0.9864
More...
Q9HAF1
Chromatin modification-related protein MEAF6
DEG_SPOP_SBC_1
155:159
AASST
SPOP
0.6503
More...
Q9NP87
DNA-directed DNA/RNA polymerase mu
DEG_SPOP_SBC_1
17:21
AASST
SPOP
0.983
More...
Q9UHV7
Mediator of RNA polymerase II transcription subunit 13
DEG_SPOP_SBC_1
1509:1513
AASST
SPOP
0.6304
More...
Q9UIF8
Bromodomain adjacent to zinc finger domain protein 2B
DEG_SPOP_SBC_1
11:15
AASST
SPOP
0.92
More...
Q9UIF8
Bromodomain adjacent to zinc finger domain protein 2B
DEG_SPOP_SBC_1
525:529
AASST
SPOP
0.9018
More...
Q9Y4A8
Nuclear factor erythroid 2-related factor 3
DEG_SPOP_SBC_1
132:136
AASST
SPOP
0.7076
More...
Q9Y2G4
Ankyrin repeat domain-containing protein 6
DEG_SPOP_SBC_1
637:641
AASST
SPOP
0.7804
More...
Q9Y2W3
Proton-associated sugar transporter A
DEG_SPOP_SBC_1
38:42
AASST
SPOP
0.9955
More...