DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
ASTSS
Uniprot ID:
Q99569
Source protein:
Plakophilin-4
Source gene:
PKP4
Class:
DEG_SPOP_SBC_1
Location:
79:83
E3 ligase:
SPOP
DEGRON score:
0.855
ASA_SCORE:
57.4
COIL:
0.7574
CONS_SCORE:
0.3391
DSS_SCORE:
0.5167
HELIX:
0.1724
FCONS_SCORE:
0.9292
RIG_SCORE:
0.6234
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S82R
TCGA-AT-A5NU
KIRP
TCGA
ASTSS
DEG_SPOP_SBC_1
0.8538
p.S82R
DO49729
KIRP
ICGC
ASTSS
DEG_SPOP_SBC_1
0.8538
p.E85K
TCGA-C5-A8XK
CESC
TCGA
ASTSS
DEG_SPOP_SBC_1
0.2778
p.E85K
DO49904
CESC
ICGC
ASTSS
DEG_SPOP_SBC_1
0.2778
p.A79T
TCGA-D1-A17Q
UCEC
TCGA
ASTSS
DEG_SPOP_SBC_1
0.7139
p.A79T
DO41903
UCEC
ICGC
ASTSS
DEG_SPOP_SBC_1
0.7139
p.P89S
TCGA-EE-A29E
SKCM
TCGA
ASTSS
DEG_SPOP_SBC_1
0.1667
p.P89S
DO220895
MELA
ICGC
ASTSS
DEG_SPOP_SBC_1
0.1667
p.P89S
DO37831
SKCM
ICGC
ASTSS
DEG_SPOP_SBC_1
0.1667
p.W90L
DO228952
LICA
ICGC
ASTSS
DEG_SPOP_SBC_1
0.1389
p.A79S
DO229045
LICA
ICGC
ASTSS
DEG_SPOP_SBC_1
0.7588
p.T81A
SIDM00577
Neuroblastoma
GDSC
ASTSS
DEG_SPOP_SBC_1
0.825
p.T81A
ACH-001603
Neuroblastoma
CCLE
ASTSS
DEG_SPOP_SBC_1
0.825
p.T81A
NH-12
autonomic_ganglia
COSMIC
ASTSS
DEG_SPOP_SBC_1
0.825
Drug responses associated with PKP4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of ASTSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A8MYU2
Potassium channel subfamily U member 1
DEG_SPOP_SBC_1
659:663
ASTSS
SPOP
0.9898
More...
P43243
Matrin-3
DEG_SPOP_SBC_1
76:80
ASTSS
SPOP
0.9927
More...
P51965
Ubiquitin-conjugating enzyme E2 E1
DEG_SPOP_SBC_1
8:12
ASTSS
SPOP
0.9054
More...
Q13023
A-kinase anchor protein 6
DEG_SPOP_SBC_1
549:553
ASTSS
SPOP
0.9989
More...
Q14766
Latent-transforming growth factor beta-binding protein 1
DEG_SPOP_SBC_1
857:861
ASTSS
SPOP
0.8183
More...
Q15652
Probable JmjC domain-containing histone demethylation protein 2C
DEG_SPOP_SBC_1
1426:1430
ASTSS
SPOP
0.9825
More...
Q15652
Probable JmjC domain-containing histone demethylation protein 2C
DEG_SPOP_SBC_1
1588:1592
ASTSS
SPOP
0.8933
More...
Q15911
Zinc finger homeobox protein 3
DEG_SPOP_SBC_1
548:552
ASTSS
SPOP
0.9698
More...
Q5HYW2
NHS-like protein 2
DEG_SPOP_SBC_1
527:531
ASTSS
SPOP
0.9546
More...
Q5SYB0
FERM and PDZ domain-containing protein 1
DEG_SPOP_SBC_1
804:808
ASTSS
SPOP
0.9808
More...
Q5T4S7
E3 ubiquitin-protein ligase UBR4
DEG_SPOP_SBC_1
1759:1763
ASTSS
SPOP
0.9982
More...
Q5VV67
Peroxisome proliferator-activated receptor gamma coactivator-related protein 1
DEG_SPOP_SBC_1
615:619
ASTSS
SPOP
0.9821
More...
Q86SQ0
Pleckstrin homology-like domain family B member 2
DEG_SPOP_SBC_1
344:348
ASTSS
SPOP
0.997
More...
Q86UK7
E3 ubiquitin-protein ligase ZNF598
DEG_SPOP_SBC_1
450:454
ASTSS
SPOP
0.9877
More...
Q86UP3
Zinc finger homeobox protein 4
DEG_SPOP_SBC_1
386:390
ASTSS
SPOP
0.9577
More...
Q86UP3
Zinc finger homeobox protein 4
DEG_SPOP_SBC_1
2387:2391
ASTSS
SPOP
0.9738
More...
Q86X51
EZH inhibitory protein
DEG_SPOP_SBC_1
189:193
ASTSS
SPOP
0.9261
More...
Q8IYT8
Serine/threonine-protein kinase ULK2
DEG_SPOP_SBC_1
339:343
ASTSS
SPOP
0.9908
More...
Q93052
Lipoma-preferred partner
DEG_SPOP_SBC_1
213:217
ASTSS
SPOP
0.9931
More...
Q96RS0
Trimethylguanosine synthase
DEG_SPOP_SBC_1
543:547
ASTSS
SPOP
0.8361
More...
Q99569
Plakophilin-4
DEG_SPOP_SBC_1
79:83
ASTSS
SPOP
0.855
More...
Q9BX26
Synaptonemal complex protein 2
DEG_SPOP_SBC_1
632:636
ASTSS
SPOP
0.7586
More...
Q9C0F0
Putative Polycomb group protein ASXL3
DEG_SPOP_SBC_1
1710:1714
ASTSS
SPOP
0.9886
More...
Q9NXE8
Pre-mRNA-splicing factor CWC25 homolog
DEG_SPOP_SBC_1
395:399
ASTSS
SPOP
0.9445
More...
Q9UHV7
Mediator of RNA polymerase II transcription subunit 13
DEG_SPOP_SBC_1
1536:1540
ASTSS
SPOP
0.9582
More...
Q9UIF8
Bromodomain adjacent to zinc finger domain protein 2B
DEG_SPOP_SBC_1
2020:2024
ASTSS
SPOP
0.9147
More...
Q9UMD9
Collagen alpha-1
DEG_SPOP_SBC_1
75:79
ASTSS
SPOP
0.9856
More...
Q9Y6X2
E3 SUMO-protein ligase PIAS3
DEG_SPOP_SBC_1
148:152
ASTSS
SPOP
0.911
More...
Q9Y6Y8
SEC23-interacting protein
DEG_SPOP_SBC_1
13:17
ASTSS
SPOP
0.8563
More...
P0C7U0
Protein ELFN1
DEG_SPOP_SBC_1
638:642
ASTSS
SPOP
0.9866
More...
Q2NL68
Proline and serine-rich protein 3
DEG_SPOP_SBC_1
224:228
ASTSS
SPOP
0.9076
More...
Q7Z3E2
Coiled-coil domain-containing protein 186
DEG_SPOP_SBC_1
8:12
ASTSS
SPOP
0.8056
More...
Q9ULL0
Acrosomal protein KIAA1210
DEG_SPOP_SBC_1
378:382
ASTSS
SPOP
0.9794
More...
P0CG42
Putative protein FAM157B
DEG_SPOP_SBC_1
345:349
ASTSS
SPOP
0.9752
More...
P0CG43
Putative protein FAM157C
DEG_SPOP_SBC_1
348:352
ASTSS
SPOP
0.9203
More...