DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PPNY
Uniprot ID:
Q01628
Source protein:
Interferon-induced transmembrane protein 3
Source gene:
IFITM3
Class:
ITCH
Location:
17:20
E3 ligase:
ITCH,NEDD4
DEGRON score:
0.9464
ASA_SCORE:
67.225
COIL:
0.8683
CONS_SCORE:
0.53
DSS_SCORE:
0.5558
HELIX:
0.0993
FCONS_SCORE:
1.2503
RIG_SCORE:
0.6504
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.F8L
TCGA-E2-A154
BRCA
TCGA
PPNY
ITCH
0.0833
p.F8L
DO1966
BRCA
ICGC
PPNY
ITCH
0.0833
p.A30V
TCGA-W3-A824
SKCM
TCGA
PPNY
ITCH
0.0556
p.V10M
DO229022
LICA
ICGC
PPNY
ITCH
0.5833
p.V10M
DO229009
LICA
ICGC
PPNY
ITCH
0.5833
p.V10M
DO229259
THCA
ICGC
PPNY
ITCH
0.5833
p.V10M
DO229232
THCA
ICGC
PPNY
ITCH
0.5833
p.V10M
DO229240
THCA
ICGC
PPNY
ITCH
0.5833
p.K24Q
DO45293
LIRI
ICGC
PPNY
ITCH
0.6667
p.E25G
DO45293
LIRI
ICGC
PPNY
ITCH
0.1944
p.A9V
DO51271
SKCM
ICGC
PPNY
ITCH
0.1111
p.E28Q
SIDM00138
Non-Small Cell Lung Carcinoma
GDSC
PPNY
ITCH
0.1111
p.E28Q
ACH-000900
Lung Cancer
CCLE
PPNY
ITCH
0.1111
p.E28Q
NCI-H23
lung
COSMIC
PPNY
ITCH
0.1111
p.H27Q
ACH-000038
Lymphoma
CCLE
PPNY
ITCH
0.1389
p.H27Q
ACH-000641
Leukemia
CCLE
PPNY
ITCH
0.1389
p.H27Q
ACH-000783
Breast Cancer
CCLE
PPNY
ITCH
0.1389
p.H27Q
ACH-000918
Leukemia
CCLE
PPNY
ITCH
0.1389
p.P17H
ACH-000221
Liver Cancer
CCLE
PPNY
ITCH
0.7694
p.E7Q
NCI-H23
lung
COSMIC
PPNY
ITCH
0.0556
p.R28H
CTV-1
haematopoietic_and_lymphoid_tissue
COSMIC
PPNY
ITCH
0.1111
Drug responses associated with IFITM3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PPNY
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O60507
Protein-tyrosine sulfotransferase 1
ITCH
332:335
PPNY
ITCH,NEDD4
0.6452
More...
O60704
Protein-tyrosine sulfotransferase 2
ITCH
331:334
PPNY
ITCH,NEDD4
0.5339
More...
O75674
TOM1-like protein 1
ITCH
438:441
PPNY
ITCH,NEDD4
0.998
More...
P08579
U2 small nuclear ribonucleoprotein B''
ITCH
148:151
PPNY
ITCH,NEDD4
0.8982
More...
P41229
Lysine-specific demethylase 5C
ITCH
1324:1327
PPNY
ITCH,NEDD4
0.9873
More...
P51168
Amiloride-sensitive sodium channel subunit beta
ITCH
617:620
PPNY
ITCH,NEDD4
0.9982
More...
P51532
Transcription activator BRG1
ITCH
246:249
PPNY
ITCH,NEDD4
0.5501
More...
P52895
Aldo-keto reductase family 1 member C2
ITCH
314:317
PPNY
ITCH,NEDD4
0.8044
More...
Q01628
Interferon-induced transmembrane protein 3
ITCH
17:20
PPNY
ITCH,NEDD4
0.9464
More...
Q01629
Interferon-induced transmembrane protein 2
ITCH
16:19
PPNY
ITCH,NEDD4
0.8133
More...
Q04828
Aldo-keto reductase family 1 member C1
ITCH
314:317
PPNY
ITCH,NEDD4
0.8044
More...
Q14517
Protocadherin Fat 1
ITCH
929:932
PPNY
ITCH,NEDD4
0.9472
More...
Q14896
Myosin-binding protein C, cardiac-type
ITCH
1169:1172
PPNY
ITCH,NEDD4
0.677
More...
Q15596
Nuclear receptor coactivator 2
ITCH
1302:1305
PPNY
ITCH,NEDD4
0.9823
More...
Q15788
Nuclear receptor coactivator 1
ITCH
1170:1173
PPNY
ITCH,NEDD4
0.8979
More...
Q5VUA4
Zinc finger protein 318
ITCH
775:778
PPNY
ITCH,NEDD4
0.9845
More...
Q709C8
Intermembrane lipid transfer protein VPS13C
ITCH
289:292
PPNY
ITCH,NEDD4
0.7061
More...
Q86VP1
Tax1-binding protein 1
ITCH
738:741
PPNY
ITCH,NEDD4
0.9374
More...
Q86YW9
Mediator of RNA polymerase II transcription subunit 12-like protein
ITCH
1793:1796
PPNY
ITCH,NEDD4
0.9276
More...
Q8IVL0
Neuron navigator 3
ITCH
284:287
PPNY
ITCH,NEDD4
0.986
More...
Q8IYT8
Serine/threonine-protein kinase ULK2
ITCH
328:331
PPNY
ITCH,NEDD4
0.9962
More...
Q8N543
Prolyl 3-hydroxylase OGFOD1
ITCH
245:248
PPNY
ITCH,NEDD4
0.8436
More...
Q8NCT1
Arrestin domain-containing protein 4
ITCH
350:353
PPNY
ITCH,NEDD4
0.5514
More...
Q92541
RNA polymerase-associated protein RTF1 homolog
ITCH
506:509
PPNY
ITCH,NEDD4
0.7387
More...
Q96BY6
Dedicator of cytokinesis protein 10
ITCH
814:817
PPNY
ITCH,NEDD4
0.8734
More...
Q96RL7
Intermembrane lipid transfer protein VPS13A
ITCH
2237:2240
PPNY
ITCH,NEDD4
0.8494
More...
Q9NYQ8
Protocadherin Fat 2
ITCH
4328:4331
PPNY
ITCH,NEDD4
0.7148
More...
Q9NZJ4
Sacsin
ITCH
1164:1167
PPNY
ITCH,NEDD4
0.8832
More...
Q9P0J1
[Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 1, mitochondrial
ITCH
386:389
PPNY
ITCH,NEDD4
0.9406
More...
C9JQL5
Putative dispanin subfamily A member 2d
ITCH
17:20
PPNY
ITCH,NEDD4
0.5355
More...
Q8IXQ4
GPALPP motifs-containing protein 1
ITCH
36:39
PPNY
ITCH,NEDD4
0.9835
More...
Q5K130
Putative uncharacterized protein CLLU1-AS1
ITCH
55:58
PPNY
ITCH,NEDD4
0.9572
More...
Q8N2G6
Zinc finger CCHC domain-containing protein 24
ITCH
129:132
PPNY
ITCH,NEDD4
0.9708
More...