DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PPSST
Uniprot ID:
Q5VWI1
Source protein:
Transcription elongation regulator 1-like protein
Source gene:
TCERG1L
Class:
DEG_SPOP_SBC_1
Location:
127:131
E3 ligase:
SPOP
DEGRON score:
0.9468
ASA_SCORE:
76.62
COIL:
0.9394
CONS_SCORE:
0.2091
DSS_SCORE:
0.2738
HELIX:
0.0278
FCONS_SCORE:
0.7651
RIG_SCORE:
0.6613
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P122Q
TCGA-18-3409
LUSC
TCGA
PPSST
DEG_SPOP_SBC_1
0.1944
p.P122Q
DO26444
LUSC
ICGC
PPSST
DEG_SPOP_SBC_1
0.1944
p.P122S
TCGA-18-3409
LUSC
TCGA
PPSST
DEG_SPOP_SBC_1
0.1944
p.P122S
TCGA-EE-A2M6
SKCM
TCGA
PPSST
DEG_SPOP_SBC_1
0.1944
p.P122S
DO26444
LUSC
ICGC
PPSST
DEG_SPOP_SBC_1
0.1944
p.P122S
DO222514
MELA
ICGC
PPSST
DEG_SPOP_SBC_1
0.1944
p.P122S
DO37976
SKCM
ICGC
PPSST
DEG_SPOP_SBC_1
0.1944
p.T131A
TCGA-55-8505
LUAD
TCGA
PPSST
DEG_SPOP_SBC_1
0.7139
p.T131A
DO45380
LUAD
ICGC
PPSST
DEG_SPOP_SBC_1
0.7139
p.G118S
TCGA-85-8355
LUSC
TCGA
PPSST
DEG_SPOP_SBC_1
0.0833
p.G118S
DO45488
LUSC
ICGC
PPSST
DEG_SPOP_SBC_1
0.0833
p.G125V
TCGA-AG-A00Y
READ
TCGA
PPSST
DEG_SPOP_SBC_1
0.2778
p.G125V
DO36542
READ
ICGC
PPSST
DEG_SPOP_SBC_1
0.2778
p.G118C
TCGA-D3-A2JC
SKCM
TCGA
PPSST
DEG_SPOP_SBC_1
0.0833
p.G118C
DO47578
SKCM
ICGC
PPSST
DEG_SPOP_SBC_1
0.0833
p.P128R
TCGA-ER-A19W
SKCM
TCGA
PPSST
DEG_SPOP_SBC_1
0.6401
p.P128R
DO50300
SKCM
ICGC
PPSST
DEG_SPOP_SBC_1
0.6401
p.P128S
TCGA-FR-A726
SKCM
TCGA
PPSST
DEG_SPOP_SBC_1
0.5641
p.P128S
DO48665
SKCM
ICGC
PPSST
DEG_SPOP_SBC_1
0.5641
p.S129A
DO222712
BTCA
ICGC
PPSST
DEG_SPOP_SBC_1
0.7588
p.P136L
DO233271
GACA
ICGC
PPSST
DEG_SPOP_SBC_1
0.1944
p.L141I
DO229041
LICA
ICGC
PPSST
DEG_SPOP_SBC_1
0.0556
p.P122L
DO51466
PACA
ICGC
PPSST
DEG_SPOP_SBC_1
0.1944
p.G118V
DO227531
PACA
ICGC
PPSST
DEG_SPOP_SBC_1
0.0833
p.S123F
SIDM00769
Non-Small Cell Lung Carcinoma
GDSC
PPSST
DEG_SPOP_SBC_1
0.2222
p.S123F
ACH-000733
Lung Cancer
CCLE
PPSST
DEG_SPOP_SBC_1
0.2222
p.S123F
NCI-H1838
lung
COSMIC
PPSST
DEG_SPOP_SBC_1
0.2222
p.L126P
SIDM01045
Endometrial Carcinoma
GDSC
PPSST
DEG_SPOP_SBC_1
0.3056
p.L126P
ACH-000978
Endometrial/Uterine Cancer
CCLE
PPSST
DEG_SPOP_SBC_1
0.3056
p.L126P
EN
endometrium
COSMIC
PPSST
DEG_SPOP_SBC_1
0.3056
p.P128T
SIDM00516
Melanoma
GDSC
PPSST
DEG_SPOP_SBC_1
0.5919
p.P128T
SIDM01879
Non-Cancerous
GDSC
PPSST
DEG_SPOP_SBC_1
0.5919
p.E133Q
SIDM00743
Non-Small Cell Lung Carcinoma
GDSC
PPSST
DEG_SPOP_SBC_1
0.2778
p.S121A
ACH-001853
Bile Duct Cancer
CCLE
PPSST
DEG_SPOP_SBC_1
0.1667
Drug responses associated with TCERG1L mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PPSST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O14686
Histone-lysine N-methyltransferase 2D
DEG_SPOP_SBC_1
2967:2971
PPSST
SPOP
0.9664
More...
O60343
TBC1 domain family member 4
DEG_SPOP_SBC_1
646:650
PPSST
SPOP
0.9933
More...
P15529
Membrane cofactor protein
DEG_SPOP_SBC_1
288:292
PPSST
SPOP
0.9554
More...
P15941
Mucin-1
DEG_SPOP_SBC_1
1220:1224
PPSST
SPOP
0.727
More...
P32243
Homeobox protein OTX2
DEG_SPOP_SBC_1
133:137
PPSST
SPOP
0.9927
More...
P42694
Probable helicase with zinc finger domain
DEG_SPOP_SBC_1
1621:1625
PPSST
SPOP
0.9359
More...
P98160
Basement membrane-specific heparan sulfate proteoglycan core protein
DEG_SPOP_SBC_1
3028:3032
PPSST
SPOP
0.7211
More...
Q02641
Voltage-dependent L-type calcium channel subunit beta-1
DEG_SPOP_SBC_1
414:418
PPSST
SPOP
0.8892
More...
Q13796
Protein Shroom2
DEG_SPOP_SBC_1
735:739
PPSST
SPOP
0.8425
More...
Q2M1Z3
Rho GTPase-activating protein 31
DEG_SPOP_SBC_1
1361:1365
PPSST
SPOP
0.9538
More...
Q6P0Q8
Microtubule-associated serine/threonine-protein kinase 2
DEG_SPOP_SBC_1
1645:1649
PPSST
SPOP
0.9971
More...
Q76L83
Putative Polycomb group protein ASXL2
DEG_SPOP_SBC_1
915:919
PPSST
SPOP
0.9866
More...
Q7Z3B3
KAT8 regulatory NSL complex subunit 1
DEG_SPOP_SBC_1
24:28
PPSST
SPOP
0.9977
More...
Q7Z5J4
Retinoic acid-induced protein 1
DEG_SPOP_SBC_1
500:504
PPSST
SPOP
0.7702
More...
Q86SQ0
Pleckstrin homology-like domain family B member 2
DEG_SPOP_SBC_1
553:557
PPSST
SPOP
0.7645
More...
Q86WP2
Vasculin
DEG_SPOP_SBC_1
16:20
PPSST
SPOP
0.9896
More...
Q8IUC6
TIR domain-containing adapter molecule 1
DEG_SPOP_SBC_1
366:370
PPSST
SPOP
0.9854
More...
Q8IWI9
MAX gene-associated protein
DEG_SPOP_SBC_1
1852:1856
PPSST
SPOP
0.9444
More...
Q8N8W4
Omega-hydroxyceramide transacylase
DEG_SPOP_SBC_1
380:384
PPSST
SPOP
0.9792
More...
Q92793
CREB-binding protein
DEG_SPOP_SBC_1
582:586
PPSST
SPOP
0.9689
More...
Q9C0D6
FH2 domain-containing protein 1
DEG_SPOP_SBC_1
931:935
PPSST
SPOP
0.8254
More...
Q9H0X9
Oxysterol-binding protein-related protein 5
DEG_SPOP_SBC_1
15:19
PPSST
SPOP
0.9979
More...
Q9NZM4
BRD4-interacting chromatin-remodeling complex-associated protein
DEG_SPOP_SBC_1
880:884
PPSST
SPOP
0.9899
More...
Q9NZP6
Nuclear pore-associated protein 1
DEG_SPOP_SBC_1
500:504
PPSST
SPOP
0.8227
More...
Q9UGU0
Transcription factor 20
DEG_SPOP_SBC_1
1673:1677
PPSST
SPOP
0.5462
More...
Q9UJ78
Zinc finger MYM-type protein 5
DEG_SPOP_SBC_1
489:493
PPSST
SPOP
0.8233
More...
Q9Y2H0
Disks large-associated protein 4
DEG_SPOP_SBC_1
66:70
PPSST
SPOP
0.9674
More...
Q76G19
PDZ domain-containing protein 4
DEG_SPOP_SBC_1
302:306
PPSST
SPOP
0.8947
More...
Q7L0X2
Glutamate-rich protein 6
DEG_SPOP_SBC_1
126:130
PPSST
SPOP
0.8085
More...
Q5VWI1
Transcription elongation regulator 1-like protein
DEG_SPOP_SBC_1
127:131
PPSST
SPOP
0.9468
More...