DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VASSS
Uniprot ID:
Q04726
Source protein:
Transducin-like enhancer protein 3
Source gene:
TLE3
Class:
DEG_SPOP_SBC_1
Location:
290:294
E3 ligase:
SPOP
DEGRON score:
0.9979
ASA_SCORE:
74.18
COIL:
0.9082
CONS_SCORE:
0.4847
DSS_SCORE:
0.6968
HELIX:
0.0606
FCONS_SCORE:
1.0355
RIG_SCORE:
0.5311
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D282H
TCGA-46-6025
LUSC
TCGA
VASSS
DEG_SPOP_SBC_1
0.1111
p.D282H
DO26644
LUSC
ICGC
VASSS
DEG_SPOP_SBC_1
0.1111
p.A283V
TCGA-AA-3984
COAD
TCGA
VASSS
DEG_SPOP_SBC_1
0.1389
p.A283V
DO9002
COAD
ICGC
VASSS
DEG_SPOP_SBC_1
0.1389
p.S289T
TCGA-B0-5703
KIRC
TCGA
VASSS
DEG_SPOP_SBC_1
0.75
p.R290C
DO229389
BTCA
ICGC
VASSS
DEG_SPOP_SBC_1
0.8301
p.R290C
DO43106
UCEC
ICGC
VASSS
DEG_SPOP_SBC_1
0.8301
p.A300S
DO228941
LICA
ICGC
VASSS
DEG_SPOP_SBC_1
0.2778
p.A300S
DO229242
THCA
ICGC
VASSS
DEG_SPOP_SBC_1
0.2778
p.S299P
DO229275
THCA
ICGC
VASSS
DEG_SPOP_SBC_1
0.6389
p.S299F
SIDM01064
Hodgkin's Lymphoma
GDSC
VASSS
DEG_SPOP_SBC_1
0.6389
p.S299F
ACH-000267
Lymphoma
CCLE
VASSS
DEG_SPOP_SBC_1
0.6389
p.S299F
HDLM-2
haematopoietic_and_lymphoid_tissue
COSMIC
VASSS
DEG_SPOP_SBC_1
0.6389
p.A290S
SK-N-FI
autonomic_ganglia
COSMIC
VASSS
DEG_SPOP_SBC_1
0.7588
p.S304F
HDLM-2
haematopoietic_and_lymphoid_tissue
COSMIC
VASSS
DEG_SPOP_SBC_1
0.0556
p.S292F
HDLM-2
haematopoietic_and_lymphoid_tissue
COSMIC
VASSS
DEG_SPOP_SBC_1
0.9093
p.P285Q
YAPC
pancreas
COSMIC
VASSS
DEG_SPOP_SBC_1
0.6389
p.I294L
MFE-296
endometrium
COSMIC
VASSS
DEG_SPOP_SBC_1
0.7174
p.G295S
CHP-134
autonomic_ganglia
COSMIC
VASSS
DEG_SPOP_SBC_1
0.75
Drug responses associated with TLE3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VASSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15226
NF-kappa-B-repressing factor
DEG_SPOP_SBC_1
63:67
VASSS
SPOP
0.9895
More...
O75179
Ankyrin repeat domain-containing protein 17
DEG_SPOP_SBC_1
2071:2075
VASSS
SPOP
0.8357
More...
P57058
Hormonally up-regulated neu tumor-associated kinase
DEG_SPOP_SBC_1
513:517
VASSS
SPOP
0.9759
More...
Q01484
Ankyrin-2
DEG_SPOP_SBC_1
2973:2977
VASSS
SPOP
0.9629
More...
Q04726
Transducin-like enhancer protein 3
DEG_SPOP_SBC_1
290:294
VASSS
SPOP
0.9979
More...
Q14494
Endoplasmic reticulum membrane sensor NFE2L1
DEG_SPOP_SBC_1
387:391
VASSS
SPOP
0.9672
More...
Q14980
Nuclear mitotic apparatus protein 1
DEG_SPOP_SBC_1
187:191
VASSS
SPOP
0.9697
More...
Q15652
Probable JmjC domain-containing histone demethylation protein 2C
DEG_SPOP_SBC_1
1052:1056
VASSS
SPOP
0.9974
More...
Q5JUK3
Potassium channel subfamily T member 1
DEG_SPOP_SBC_1
1202:1206
VASSS
SPOP
0.9307
More...
Q5SNT2
Transmembrane protein 201
DEG_SPOP_SBC_1
514:518
VASSS
SPOP
0.9614
More...
Q5T0W9
Protein FAM83B
DEG_SPOP_SBC_1
425:429
VASSS
SPOP
0.9994
More...
Q5T5P2
Sickle tail protein homolog
DEG_SPOP_SBC_1
1700:1704
VASSS
SPOP
0.9907
More...
Q7RTP6
[F-actin]-monooxygenase MICAL3
DEG_SPOP_SBC_1
931:935
VASSS
SPOP
0.6437
More...
Q86Y91
Kinesin-like protein KIF18B
DEG_SPOP_SBC_1
787:791
VASSS
SPOP
0.9955
More...
Q8WZ42
Titin
DEG_SPOP_SBC_1
351:355
VASSS
SPOP
0.9052
More...
Q92502
StAR-related lipid transfer protein 8
DEG_SPOP_SBC_1
445:449
VASSS
SPOP
0.6862
More...
Q96L93
Kinesin-like protein KIF16B
DEG_SPOP_SBC_1
1096:1100
VASSS
SPOP
0.9957
More...
Q9BZR8
Apoptosis facilitator Bcl-2-like protein 14
DEG_SPOP_SBC_1
196:200
VASSS
SPOP
0.6707
More...
Q9C0D6
FH2 domain-containing protein 1
DEG_SPOP_SBC_1
1040:1044
VASSS
SPOP
0.9979
More...
Q9H422
Homeodomain-interacting protein kinase 3
DEG_SPOP_SBC_1
570:574
VASSS
SPOP
0.9829
More...
Q9NRR6
Phosphatidylinositol polyphosphate 5-phosphatase type IV
DEG_SPOP_SBC_1
164:168
VASSS
SPOP
0.9986
More...
Q9NZM4
BRD4-interacting chromatin-remodeling complex-associated protein
DEG_SPOP_SBC_1
888:892
VASSS
SPOP
0.8649
More...
Q9UGK3
Signal-transducing adaptor protein 2
DEG_SPOP_SBC_1
327:331
VASSS
SPOP
0.9253
More...
Q9ULT8
E3 ubiquitin-protein ligase HECTD1
DEG_SPOP_SBC_1
1391:1395
VASSS
SPOP
0.9996
More...
Q9UQB3
Catenin delta-2
DEG_SPOP_SBC_1
1037:1041
VASSS
SPOP
0.5544
More...
Q8IX06
Putative exonuclease GOR
DEG_SPOP_SBC_1
230:234
VASSS
SPOP
0.9994
More...
Q8IYM0
Protein FAM186B
DEG_SPOP_SBC_1
859:863
VASSS
SPOP
0.9006
More...
Q9BWW9
Apolipoprotein L5
DEG_SPOP_SBC_1
140:144
VASSS
SPOP
0.5682
More...
Q53LP3
Ankyrin repeat domain-containing protein SOWAHC
DEG_SPOP_SBC_1
247:251
VASSS
SPOP
0.9642
More...
Q5SVZ6
Zinc finger MYM-type protein 1
DEG_SPOP_SBC_1
395:399
VASSS
SPOP
0.937
More...