DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
VASSS
Uniprot ID:
Q5JUK3
Source protein:
Potassium channel subfamily T member 1
Source gene:
KCNT1
Class:
DEG_SPOP_SBC_1
Location:
1202:1206
E3 ligase:
SPOP
DEGRON score:
0.9307
ASA_SCORE:
70.68
COIL:
0.865
CONS_SCORE:
0.2787
DSS_SCORE:
0.47
HELIX:
0.0996
FCONS_SCORE:
0.8612
RIG_SCORE:
0.6377
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R1202H
TE-12
oesophagus
COSMIC
VASSS
DEG_SPOP_SBC_1
0.8244
p.V1206M
DO20930
KIRP
ICGC
VASSS
DEG_SPOP_SBC_1
0.7208
p.V1207M
TCGA-B1-5398
KIRP
TCGA
VASSS
DEG_SPOP_SBC_1
0.3056
p.R1200S
TCGA-78-7146
LUAD
TCGA
VASSS
DEG_SPOP_SBC_1
0.2778
p.R1200H
SIDM00023
Esophageal Squamous Cell Carcinoma
GDSC
VASSS
DEG_SPOP_SBC_1
0.2778
p.R1200H
ACH-002311
Esophageal Cancer
CCLE
VASSS
DEG_SPOP_SBC_1
0.2778
p.R1200H
TE-12
oesophagus
COSMIC
VASSS
DEG_SPOP_SBC_1
0.2778
p.R1199C
DO233282
GACA
ICGC
VASSS
DEG_SPOP_SBC_1
0.25
p.R1199L
DO229032
LICA
ICGC
VASSS
DEG_SPOP_SBC_1
0.25
p.R1199S
DO23717
LUAD
ICGC
VASSS
DEG_SPOP_SBC_1
0.25
p.L1198F
SIDM01343
Gastric Carcinoma
GDSC
VASSS
DEG_SPOP_SBC_1
0.2222
p.L1198F
ACH-000490
Cervical Cancer
CCLE
VASSS
DEG_SPOP_SBC_1
0.2222
p.L1198F
ACH-000764
Gastric Cancer
CCLE
VASSS
DEG_SPOP_SBC_1
0.2222
p.Q1211H
DO2401
BRCA
ICGC
VASSS
DEG_SPOP_SBC_1
0.1944
p.Q1212H
TCGA-AC-A23H
BRCA
TCGA
VASSS
DEG_SPOP_SBC_1
0.1667
p.R1195H
TE-12
oesophagus
COSMIC
VASSS
DEG_SPOP_SBC_1
0.1389
p.P1213S
M059J
central_nervous_system
COSMIC
VASSS
DEG_SPOP_SBC_1
0.1389
p.D1194G
TCGA-FI-A2D5
UCEC
TCGA
VASSS
DEG_SPOP_SBC_1
0.1111
p.R1214Q
SIDM00960
Colorectal Carcinoma
GDSC
VASSS
DEG_SPOP_SBC_1
0.1111
p.R1214Q
SIDM00712
Non-Cancerous
GDSC
VASSS
DEG_SPOP_SBC_1
0.1111
p.R1214Q
SIDM00713
Mesothelioma
GDSC
VASSS
DEG_SPOP_SBC_1
0.1111
p.R1214Q
SIDM00052
Esophageal Squamous Cell Carcinoma
GDSC
VASSS
DEG_SPOP_SBC_1
0.1111
p.R1214Q
SIDM00622
Glioblastoma
GDSC
VASSS
DEG_SPOP_SBC_1
0.1111
p.R1214Q
SIDM00083
Glioblastoma
GDSC
VASSS
DEG_SPOP_SBC_1
0.1111
p.P1194S
M059J
central_nervous_system
COSMIC
VASSS
DEG_SPOP_SBC_1
0.1111
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Drug responses associated with KCNT1 mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
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All proteins holding degron of VASSS
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q7RTP6
[F-actin]-monooxygenase MICAL3
DEG_SPOP_SBC_1
931:935
VASSS
SPOP
0.6437
More...
O75179
Ankyrin repeat domain-containing protein 17
DEG_SPOP_SBC_1
2071:2075
VASSS
SPOP
0.8357
More...
Q53LP3
Ankyrin repeat domain-containing protein SOWAHC
DEG_SPOP_SBC_1
247:251
VASSS
SPOP
0.9642
More...
Q01484
Ankyrin-2
DEG_SPOP_SBC_1
2973:2977
VASSS
SPOP
0.9629
More...
Q9BWW9
Apolipoprotein L5
DEG_SPOP_SBC_1
140:144
VASSS
SPOP
0.5682
More...
Q9BZR8
Apoptosis facilitator Bcl-2-like protein 14
DEG_SPOP_SBC_1
196:200
VASSS
SPOP
0.6707
More...
Q9NZM4
BRD4-interacting chromatin-remodeling complex-associated protein
DEG_SPOP_SBC_1
888:892
VASSS
SPOP
0.8649
More...
Q9UQB3
Catenin delta-2
DEG_SPOP_SBC_1
1037:1041
VASSS
SPOP
0.5544
More...
Q9ULT8
E3 ubiquitin-protein ligase HECTD1
DEG_SPOP_SBC_1
1391:1395
VASSS
SPOP
0.9996
More...
Q14494
Endoplasmic reticulum membrane sensor NFE2L1
DEG_SPOP_SBC_1
387:391
VASSS
SPOP
0.9672
More...
Q9C0D6
FH2 domain-containing protein 1
DEG_SPOP_SBC_1
1040:1044
VASSS
SPOP
0.9979
More...
Q9H422
Homeodomain-interacting protein kinase 3
DEG_SPOP_SBC_1
570:574
VASSS
SPOP
0.9829
More...
P57058
Hormonally up-regulated neu tumor-associated kinase
DEG_SPOP_SBC_1
513:517
VASSS
SPOP
0.9759
More...
Q96L93
Kinesin-like protein KIF16B
DEG_SPOP_SBC_1
1096:1100
VASSS
SPOP
0.9957
More...
Q86Y91
Kinesin-like protein KIF18B
DEG_SPOP_SBC_1
787:791
VASSS
SPOP
0.9955
More...
O15226
NF-kappa-B-repressing factor
DEG_SPOP_SBC_1
63:67
VASSS
SPOP
0.9895
More...
Q14980
Nuclear mitotic apparatus protein 1
DEG_SPOP_SBC_1
187:191
VASSS
SPOP
0.9697
More...
Q9NRR6
Phosphatidylinositol polyphosphate 5-phosphatase type IV
DEG_SPOP_SBC_1
164:168
VASSS
SPOP
0.9986
More...
Q5JUK3
Potassium channel subfamily T member 1
DEG_SPOP_SBC_1
1202:1206
VASSS
SPOP
0.9307
More...
Q15652
Probable JmjC domain-containing histone demethylation protein 2C
DEG_SPOP_SBC_1
1052:1056
VASSS
SPOP
0.9974
More...
Q8IYM0
Protein FAM186B
DEG_SPOP_SBC_1
859:863
VASSS
SPOP
0.9006
More...
Q5T0W9
Protein FAM83B
DEG_SPOP_SBC_1
425:429
VASSS
SPOP
0.9994
More...
Q8IX06
Putative exonuclease GOR
DEG_SPOP_SBC_1
230:234
VASSS
SPOP
0.9994
More...
Q5T5P2
Sickle tail protein homolog
DEG_SPOP_SBC_1
1700:1704
VASSS
SPOP
0.9907
More...
Q9UGK3
Signal-transducing adaptor protein 2
DEG_SPOP_SBC_1
327:331
VASSS
SPOP
0.9253
More...
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