Search results: The pahtway p179 has 140 genes in the original annotation. Currently, there are 100 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group ? Functional group ?
55506H2AFY2macroH2A2H2A histone family member Y210q22.1CV:PGCnp
DMG:Jaffe_2016
89ACTN3-actinin alpha 3 (gene/pseudogene)11q13.1CV:PGCnpG2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanNRC
3014H2AFXH2A.X | H2A/X | H2AXH2A histone family member X11q23.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
2904GRIN2BEIEE27 | GluN2B | MRD6 | NMDAR2B | NR2B | hNR3glutamate ionotropic receptor NMDA type subunit 2B12p12ADT:Sun_2012
Association
Core
CV:GWASdb
CV:PGCnp
DNM:Awadalla_2010
GO_Annotation
GR_COR
GR_Ng
GR_WM
Network
PMID:cooccur
LIGAND GATED ION SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_PocklingtonH1
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
55766H2AFJH2AJH2A histone family member J12p12.3CV:PGCnp
Expression
121504HIST4H4H4/phistone cluster 4, H412p12.3CV:PGCnp
715C1R-complement C1r subcomponent12p13CV:PGCnp
GO_Annotation
3458IFNGIFG | IFIinterferon, gamma12q14CV:GWAScat
CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
87ACTN1BDPLT15actinin alpha 114q24|14q22-q24CV:PGCnp
CV:PheWAS
DMG:Nishioka_2013
DNM:Fromer_2014
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Ascano FMRP targets
2903GRIN2AEPND | FESD | GluN2A | LKS | NMDAR2A | NR2Aglutamate ionotropic receptor NMDA type subunit 2A16p13.2Association
CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
DNM:Fromer_2014
GO_Annotation
PMID:cooccur
LIGAND GATED ION SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_mGluR5
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
718C3AHUS5 | ARMD9 | ASP | C3a | C3b | CPAMD1 | HEL-S-62pcomplement component 319p13.3-p13.2Association
CV:PGCnp
GO_Annotation
GR_Ng
GR_WM
PMID:cooccur
81ACTN4ACTININ-4 | FSGS | FSGS1actinin alpha 419q13CV:PGCnp
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanNRC
CompositeSet
712C1QA-complement component 1, q subcomponent, A chain1p36.12CV:PGCnp
PMID:cooccur
713C1QB-complement component 1, q subcomponent, B chain1p36.12CV:PGCnp
PMID:cooccur
8337HIST2H2AA3H2A | H2A.2 | H2A/O | H2A/q | H2AFO | H2a-615 | HIST2H2AAhistone cluster 2, H2aa31q21.2DEG:Sanders_2013
GSMA_I
GSMA_IIA
8349HIST2H2BEGL105 | H2B | H2B.1 | H2BFQ | H2BGL105 | H2BQhistone cluster 2, H2be1q21.2CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_I
GSMA_IIA
PMID:cooccur
2215FCGR3BCD16 | CD16b | FCG3 | FCGR3 | FCR-10 | FCRIII | FCRIIIbFc fragment of IgG receptor IIIb1q23CV:PGCnp
DNM:Fromer_2014
GSMA_IIA
CompositeSet
2212FCGR2ACD32 | CD32A | CDw32 | FCG2 | FCGR2 | FCGR2A1 | FcGR | IGFR2Fc fragment of IgG receptor IIa1q23CV:GWAScat
CV:GWASdb
CV:PGCnp
GSMA_IIA
3586IL10CSIF | GVHDS | IL-10 | IL10A | TGIFinterleukin 101q31-q32Association
CV:PGCnp
GO_Annotation
GR_COR
GR_Ng
GR_WM
PMID:cooccur
8290HIST3H3H3.4 | H3/g | H3FT | H3thistone cluster 3, H31q42CV:PGCnp
DMG:Wockner_2014
6628SNRPBCCMS | COD | SNRPB1 | Sm-B/B' | SmB/B' | SmB/SmB' | snRNP-Bsmall nuclear ribonucleoprotein polypeptides B and B120p13CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
958CD40Bp50 | CDW40 | TNFRSF5 | p50CD40 molecule20q12-q13.2CV:GWASdb
CV:PGCnp
PMID:cooccur
6634SNRPD3SMD3 | Sm-D3small nuclear ribonucleoprotein D3 polypeptide22q11.23CV:PGCnp
DMG:Nishioka_2013
GSMA_I
6741SSBLARP3 | La | La/SSBSjogren syndrome antigen B2q31.1CV:PGCnp
PMID:cooccur
Ascano FMRP targets
940CD28Tp44CD28 molecule2q33CV:PGCnp
PMID:cooccur
941CD80B7 | B7-1 | B7.1 | BB1 | CD28LG | CD28LG1 | LAB7CD80 molecule3q13.3-q21CV:PGCnp
PMID:cooccur
942CD86B7-2 | B7.2 | B70 | CD28LG2 | LAB72CD86 molecule3q21CV:PGCnp
PMID:cooccur
3015H2AFZH2A.Z-1 | H2A.z | H2A/z | H2AZH2A histone family member Z4q24CV:PGCnp
PMID:cooccur
729C6-complement component 65p13CV:PGCnp
PMID:cooccur
730C7-complement component 75p13CV:PGCnp
PMID:cooccur
735C9ARMD15 | C9Dcomplement component 95p14-p12CV:PGCnp
9555H2AFYH2A.y | H2A/y | H2AF12M | MACROH2A1.1 | mH2A1 | macroH2A1.2H2A histone family member Y5q31.1CV:PGCnp
DMG:Jaffe_2016
GSMA_I
3108HLA-DMAD6S222E | DMA | HLADM | RING6major histocompatibility complex, class II, DM alpha6p21.3CV:GWAScat
CV:GWASdb
CV:PGCnp
GSMA_I
3109HLA-DMBD6S221E | RING7major histocompatibility complex, class II, DM beta6p21.3CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GSMA_I
PMID:cooccur
3111HLA-DOAHLA-DNA | HLA-DZA | HLADZmajor histocompatibility complex, class II, DO alpha6p21.3CV:PGCnp
GSMA_I
PMID:cooccur
3112HLA-DOBDOBmajor histocompatibility complex, class II, DO beta6p21.3CV:GWASdb
CV:PGCnp
GSMA_I
PMID:cooccur
3113HLA-DPA1DP(W3) | DP(W4) | HLA-DP1A | HLADP | HLASB | PLT1major histocompatibility complex, class II, DP alpha 16p21.3CV:PGCnp
GSMA_I
PMID:cooccur
3115HLA-DPB1DPB1 | HLA-DP | HLA-DP1B | HLA-DPBmajor histocompatibility complex, class II, DP beta 16p21.3CV:PGCnp
GSMA_I
PMID:cooccur
3117HLA-DQA1CD | CELIAC1 | DQ-A1 | GSE | HLA-DQAmajor histocompatibility complex, class II, DQ alpha 16p21.3CV:GWAScat
CV:GWASdb
CV:PGCnp
GSMA_I
PMID:cooccur
3118HLA-DQA2DX-ALPHA | HLA-DXAmajor histocompatibility complex, class II, DQ alpha 26p21.3CV:GWAScat
CV:GWASdb
CV:PGCnp
GSMA_I
PMID:cooccur
3119HLA-DQB1CELIAC1 | HLA-DQB | IDDM1major histocompatibility complex, class II, DQ beta 16p21.3CV:GWAScat
CV:GWASdb
CV:PGCnp
GSMA_I
PMID:cooccur
3122HLA-DRAHLA-DRA1 | MLRWmajor histocompatibility complex, class II, DR alpha6p21.3CV:GWASdb
CV:PGCnp
CV:Ripke_2013
GSMA_I
PMID:cooccur
3123HLA-DRB1DRB1 | DRw10 | HLA-DR1B | HLA-DRB | SS1major histocompatibility complex, class II, DR beta 16p21.3CV:GWAScat
CV:GWASdb
CV:PGCnp
GSMA_I
PMID:cooccur
3125HLA-DRB3DRB1 | DRw10 | HLA-DR1B | HLA-DR3B | HLA-DRB | SS1major histocompatibility complex, class II, DR beta 36p21.3PMID:cooccur
3127HLA-DRB5HLA-DRBmajor histocompatibility complex, class II, DR beta 56p21.3CV:GWASdb
CV:PGCnp
CV:Ripke_2013
GSMA_I
PMID:cooccur
717C2ARMD14 | CO2complement component 26p21.3CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
GSMA_I
PMID:cooccur
720C4AC4 | C4A2 | C4A3 | C4A4 | C4A6 | C4AD | C4S | CO4 | CPAMD2 | RGcomplement component 4A (Rodgers blood group)6p21.3Association
CV:PGCnp
GSMA_I
PMID:cooccur
721C4BC4B1 | C4B12 | C4B2 | C4B3 | C4B5 | C4BD | C4B_2 | C4F | CH | CO4 | CPAMD3complement component 4B (Chido blood group)6p21.3Association
CV:PGCnp
GR_Ng
GR_WM
GSMA_I
PMID:cooccur
7124TNFDIF | TNF-alpha | TNFA | TNFSF2 | TNLG1Ftumor necrosis factor6p21.3Association
CV:PGCnp
GO_Annotation
GR_COR
GR_Ng
GR_WM
GSMA_I
PMID:cooccur
3013HIST1H2ADH2A.3 | H2A/g | H2AFGhistone cluster 1, H2ad6p21.3GSMA_I
3017HIST1H2BDH2B.1B | H2B/b | H2BFB | HIRIP2 | dJ221C16.6histone cluster 1, H2bd6p21.3CV:PGCnp
DEG:Sanders_2013
GSMA_I
PMID:cooccur
3018HIST1H2BBH2B.1 | H2B/f | H2BFFhistone cluster 1, H2bb6p21.3CV:PGCnp
GSMA_I
85235HIST1H2AHH2A/S | H2AFALii | H2AH | dJ86C11.1histone cluster 1, H2ah6p21.33CV:PGCnp
GSMA_I
85236HIST1H2BKH2B/S | H2BFAiii | H2BFT | H2BKhistone cluster 1, H2bk6p21.33CV:PGCnp
GSMA_I
8294HIST1H4IH4/m | H4FM | H4Mhistone cluster 1, H4i6p21.33DNM:Fromer_2014
GSMA_I
CompositeSet
8330HIST1H2AKH2A/d | H2AFDhistone cluster 1, H2ak6p22.1CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GSMA_I
8331HIST1H2AJH2A/E | H2AFE | dJ160A22.4histone cluster 1, H2aj6p22.1CV:PGCnp
GSMA_I
8969HIST1H2AGH2A.1b | H2A/p | H2AFP | H2AG | pH2A/fhistone cluster 1, H2ag6p22.1CV:PGCnp
DNM:Xu_2012
Expression
GSMA_I
CompositeSet
8332HIST1H2ALH2A.i | H2A/i | H2AFI | dJ193B12.9histone cluster 1, H2al6p22.1CV:GWASdb
CV:PGCnp
GSMA_I
8970HIST1H2BJH2B/r | H2BFR | H2BJhistone cluster 1, H2bj6p22.1CV:GWASdb
CV:PGCnp
Expression
GSMA_I
PMID:cooccur
8334HIST1H2ACH2A/l | H2AFL | dJ221C16.4histone cluster 1, H2ac6p22.1CV:GWASdb
CV:PGCnp
GSMA_I
8336HIST1H2AMH2A.1 | H2A/n | H2AFN | dJ193B12.1histone cluster 1, H2am6p22.1Expression
GSMA_I
8340HIST1H2BLH2B/c | H2BFC | dJ97D16.4histone cluster 1, H2bl6p22.1CV:GWASdb
CV:PGCnp
GSMA_I
8341HIST1H2BNH2B/d | H2BFDhistone cluster 1, H2bn6p22.1CV:GWASdb
CV:PGCnp
GSMA_I
8342HIST1H2BMH2B/e | H2BFE | dJ160A22.3histone cluster 1, H2bm6p22.1CV:PGCnp
GSMA_I
8347HIST1H2BCH2B.1 | H2B/l | H2BFL | dJ221C16.3histone cluster 1, H2bc6p22.1CV:GWASdb
CV:PGCnp
DEG:Sanders_2013
GSMA_I
PMID:cooccur
8348HIST1H2BOH2B.2 | H2B/n | H2BFN | dJ193B12.2histone cluster 1, H2bo6p22.1CV:PGCnp
GSMA_I
8351HIST1H3DH3/b | H3FBhistone cluster 1, H3d6p22.1CV:PGCnp
DMG:Wockner_2014
GSMA_I
8354HIST1H3IH3.f | H3/f | H3FFhistone cluster 1, H3i6p22.1CV:PGCnp
GSMA_I
8356HIST1H3JH3/j | H3FJhistone cluster 1, H3j6p22.1CV:PGCnp
GSMA_I
8357HIST1H3HH3/k | H3F1K | H3FKhistone cluster 1, H3h6p22.1CV:PGCnp
GSMA_I
8362HIST1H4KH4/d | H4F2iii | H4FD | dJ160A22.1histone cluster 1, H4k6p22.1CV:PGCnp
DEG:Sanders_2013
GSMA_I
PMID:cooccur
8363HIST1H4JH4/e | H4F2iv | H4FE | dJ160A22.2histone cluster 1, H4j6p22.1CV:PGCnp
GSMA_I
8364HIST1H4CH4/g | H4FG | dJ221C16.1histone cluster 1, H4c6p22.1CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_I
8365HIST1H4HH4/h | H4FHhistone cluster 1, H4h6p22.1CV:PGCnp
GSMA_I
8368HIST1H4LH4.k | H4/k | H4FKhistone cluster 1, H4l6p22.1CV:PGCnp
GSMA_I
221613HIST1H2AAH2AA | H2AFR | TH2A | bA317E16.2histone cluster 1, H2aa6p22.2CV:GWASdb
CV:PGCnp
GSMA_I
255626HIST1H2BAH2BFU | STBP | TH2B | TSH2B | TSH2B.1 | bA317E16.3histone cluster 1, H2ba6p22.2CV:PGCnp
GSMA_I
8968HIST1H3FH3/i | H3FIhistone cluster 1, H3f6p22.2GSMA_I
3012HIST1H2AEH2A.1 | H2A.2 | H2A/a | H2AFAhistone cluster 1, H2ae6p22.2CV:PGCnp
GSMA_I
G2Cdb.humanPSD
G2Cdb.humanPSP
8335HIST1H2ABH2A/m | H2AFMhistone cluster 1, H2ab6p22.2CV:PGCnp
GSMA_I
8339HIST1H2BGH2B.1A | H2B/a | H2BFA | dJ221C16.8histone cluster 1, H2bg6p22.2CV:PGCnp
DEG:Sanders_2013
GSMA_I
PMID:cooccur
8343HIST1H2BFH2B/g | H2BFGhistone cluster 1, H2bf6p22.2CV:PGCnp
GSMA_I
8344HIST1H2BEH2B.h | H2B/h | H2BFH | dJ221C16.8histone cluster 1, H2be6p22.2CV:PGCnp
DNM:Fromer_2014
GSMA_I
CompositeSet
8345HIST1H2BHH2B/j | H2BFJhistone cluster 1, H2bh6p22.2CV:PGCnp
DEG:Sanders_2013
GSMA_I
PMID:cooccur
8346HIST1H2BIH2B/k | H2BFKhistone cluster 1, H2bi6p22.2CV:PGCnp
GSMA_I
8350HIST1H3AH3/A | H3FAhistone cluster 1, H3a6p22.2GSMA_I
8352HIST1H3CH3.1 | H3/c | H3FChistone cluster 1, H3c6p22.2CV:PGCnp
GSMA_I
8353HIST1H3EH3.1 | H3/d | H3FDhistone cluster 1, H3e6p22.2CV:PGCnp
GSMA_I
8355HIST1H3GH3/h | H3FHhistone cluster 1, H3g6p22.2CV:PGCnp
DMG:Wockner_2014
GSMA_I
8358HIST1H3BH3/l | H3FLhistone cluster 1, H3b6p22.2CV:PGCnp
GSMA_I
8359HIST1H4AH4FAhistone cluster 1, H4a6p22.2CV:PGCnp
GSMA_I
G2Cdb.humanPSD
G2Cdb.humanPSP
8360HIST1H4DH4/b | H4FB | dJ221C16.9histone cluster 1, H4d6p22.2CV:PGCnp
GSMA_I
8361HIST1H4FH4 | H4/c | H4FChistone cluster 1, H4f6p22.2CV:PGCnp
GSMA_I
8366HIST1H4BH4/I | H4FIhistone cluster 1, H4b6p22.2CV:PGCnp
GSMA_I
8367HIST1H4EH4/j | H4FJhistone cluster 1, H4e6p22.2CV:PGCnp
GSMA_I
8369HIST1H4GH4/l | H4FLhistone cluster 1, H4g6p22.2GSMA_I
94239H2AFVH2A.Z-2 | H2AVH2A histone family member V7p13CV:PGCnp
DNM:Xu_2012
CompositeSet
727C5C5D | C5a | C5b | CPAMD4 | ECLZBcomplement component 59q33-q34CV:PGCnp
GO_Annotation
PMID:cooccur
959CD40LGCD154 | CD40L | HIGM1 | IGM | IMD3 | T-BAM | TNFSF5 | TRAP | gp39 | hCD40LCD40 ligandXq26DMG:vanEijk_2014