DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PASTS
Uniprot ID:
O15075
Source protein:
Serine/threonine-protein kinase DCLK1
Source gene:
DCLK1
Class:
DEG_SPOP_SBC_1
Location:
308:312
E3 ligase:
SPOP
DEGRON score:
0.9913
ASA_SCORE:
74.32
COIL:
0.888
CONS_SCORE:
0.4185
DSS_SCORE:
0.7924
HELIX:
0.0502
FCONS_SCORE:
1.0001
RIG_SCORE:
0.508
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P308T
TCGA-49-AAR0
LUAD
TCGA
PASTS
DEG_SPOP_SBC_1
0.7031
p.P308T
DO218917
LUAD
ICGC
PASTS
DEG_SPOP_SBC_1
0.7031
p.T311I
TCGA-A5-A1OF
UCEC
TCGA
PASTS
DEG_SPOP_SBC_1
0.7078
p.T311I
DO42568
UCEC
ICGC
PASTS
DEG_SPOP_SBC_1
0.7078
p.K306R
TCGA-BR-6709
STAD
TCGA
PASTS
DEG_SPOP_SBC_1
0.2778
p.K306R
DO38356
STAD
ICGC
PASTS
DEG_SPOP_SBC_1
0.2778
p.S302Y
TCGA-D7-6815
STAD
TCGA
PASTS
DEG_SPOP_SBC_1
0.1667
p.S302Y
DO38603
STAD
ICGC
PASTS
DEG_SPOP_SBC_1
0.1667
p.S310F
TCGA-DC-5869
READ
TCGA
PASTS
DEG_SPOP_SBC_1
0.7982
p.S310F
DO36584
READ
ICGC
PASTS
DEG_SPOP_SBC_1
0.7982
p.G300R
TCGA-DM-A1D7
COAD
TCGA
PASTS
DEG_SPOP_SBC_1
0.1111
p.G300R
DO10044
COAD
ICGC
PASTS
DEG_SPOP_SBC_1
0.1111
p.R304C
TCGA-DM-A1DA
COAD
TCGA
PASTS
DEG_SPOP_SBC_1
0.2222
p.R304C
DO7852
COAD
ICGC
PASTS
DEG_SPOP_SBC_1
0.2222
p.R304C
DO232761
PBCA
ICGC
PASTS
DEG_SPOP_SBC_1
0.2222
p.P318T
TCGA-EE-A181
SKCM
TCGA
PASTS
DEG_SPOP_SBC_1
0.1667
p.P318T
DO37444
SKCM
ICGC
PASTS
DEG_SPOP_SBC_1
0.1667
p.S305G
TCGA-EW-A1IZ
BRCA
TCGA
PASTS
DEG_SPOP_SBC_1
0.6944
p.S305G
DO2937
BRCA
ICGC
PASTS
DEG_SPOP_SBC_1
0.6944
p.P308R
TCGA-IN-A6RS
STAD
TCGA
PASTS
DEG_SPOP_SBC_1
0.7512
p.P308R
DO51743
STAD
ICGC
PASTS
DEG_SPOP_SBC_1
0.7512
p.A309D
TCGA-IW-A3M5
SARC
TCGA
PASTS
DEG_SPOP_SBC_1
0.6682
p.A309D
DO220176
SARC
ICGC
PASTS
DEG_SPOP_SBC_1
0.6682
p.K306T
TCGA-RD-A7BT
STAD
TCGA
PASTS
DEG_SPOP_SBC_1
0.2778
p.K306T
DO50131
STAD
ICGC
PASTS
DEG_SPOP_SBC_1
0.2778
p.P301S
DO233652
GACA
ICGC
PASTS
DEG_SPOP_SBC_1
0.1389
p.R304H
DO233767
GACA
ICGC
PASTS
DEG_SPOP_SBC_1
0.2222
p.R304H
DO49150
PACA
ICGC
PASTS
DEG_SPOP_SBC_1
0.2222
p.R304H
DO49466
PACA
ICGC
PASTS
DEG_SPOP_SBC_1
0.2222
p.S305R
DO229028
LICA
ICGC
PASTS
DEG_SPOP_SBC_1
0.6944
p.P301T
DO229025
LICA
ICGC
PASTS
DEG_SPOP_SBC_1
0.1389
p.S307F
DO231774
LINC
ICGC
PASTS
DEG_SPOP_SBC_1
0.75
p.Q321H
DO27881
ORCA
ICGC
PASTS
DEG_SPOP_SBC_1
0.0833
p.Q321H
SIDM00217
Colorectal Carcinoma
GDSC
PASTS
DEG_SPOP_SBC_1
0.0833
p.Q321H
ACH-000999
Colon/Colorectal Cancer
CCLE
PASTS
DEG_SPOP_SBC_1
0.0833
p.Q321H
SNU-1040
large_intestine
COSMIC
PASTS
DEG_SPOP_SBC_1
0.0833
p.P301L
DO49172
PACA
ICGC
PASTS
DEG_SPOP_SBC_1
0.1389
p.S307Y
DO229446
SKCA
ICGC
PASTS
DEG_SPOP_SBC_1
0.75
p.Q298K
SISO
cervix
COSMIC
PASTS
DEG_SPOP_SBC_1
0.5
p.P302T
NCI-H2030
lung
COSMIC
PASTS
DEG_SPOP_SBC_1
0.1667
p.A313E
LS-123
large_intestine
COSMIC
PASTS
DEG_SPOP_SBC_1
0.75
Drug responses associated with DCLK1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PASTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15075
Serine/threonine-protein kinase DCLK1
DEG_SPOP_SBC_1
308:312
PASTS
SPOP
0.9913
More...
O75151
Lysine-specific demethylase PHF2
DEG_SPOP_SBC_1
993:997
PASTS
SPOP
0.8792
More...
O75592
E3 ubiquitin-protein ligase MYCBP2
DEG_SPOP_SBC_1
2725:2729
PASTS
SPOP
0.999
More...
O75694
Nuclear pore complex protein Nup155
DEG_SPOP_SBC_1
11:15
PASTS
SPOP
0.9977
More...
O94973
AP-2 complex subunit alpha-2
DEG_SPOP_SBC_1
646:650
PASTS
SPOP
0.827
More...
O95208
Epsin-2
DEG_SPOP_SBC_1
372:376
PASTS
SPOP
0.9841
More...
P15822
Zinc finger protein 40
DEG_SPOP_SBC_1
2657:2661
PASTS
SPOP
0.9979
More...
P20749
B-cell lymphoma 3 protein
DEG_SPOP_SBC_1
365:369
PASTS
SPOP
0.954
More...
P28908
Tumor necrosis factor receptor superfamily member 8
DEG_SPOP_SBC_1
345:349
PASTS
SPOP
0.9474
More...
Q01970
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3
DEG_SPOP_SBC_1
927:931
PASTS
SPOP
0.985
More...
Q02505
Mucin-3A
DEG_SPOP_SBC_1
556:560
PASTS
SPOP
0.7232
More...
Q15788
Nuclear receptor coactivator 1
DEG_SPOP_SBC_1
1181:1185
PASTS
SPOP
0.9984
More...
Q16621
Transcription factor NF-E2 45 kDa subunit
DEG_SPOP_SBC_1
86:90
PASTS
SPOP
0.9466
More...
Q3SXY7
Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 3
DEG_SPOP_SBC_1
463:467
PASTS
SPOP
0.9585
More...
Q5TCY1
Tau-tubulin kinase 1
DEG_SPOP_SBC_1
1236:1240
PASTS
SPOP
0.9958
More...
Q659A1
Little elongation complex subunit 2
DEG_SPOP_SBC_1
419:423
PASTS
SPOP
0.9906
More...
Q6ZT12
E3 ubiquitin-protein ligase UBR3
DEG_SPOP_SBC_1
1016:1020
PASTS
SPOP
0.5066
More...
Q8IWZ3
Ankyrin repeat and KH domain-containing protein 1
DEG_SPOP_SBC_1
2005:2009
PASTS
SPOP
0.9657
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
549:553
PASTS
SPOP
0.7898
More...
Q99469
SH3 and cysteine-rich domain-containing protein
DEG_SPOP_SBC_1
28:32
PASTS
SPOP
0.9799
More...
Q99743
Neuronal PAS domain-containing protein 2
DEG_SPOP_SBC_1
650:654
PASTS
SPOP
0.9948
More...
Q9NWS9
Zinc finger protein 446
DEG_SPOP_SBC_1
198:202
PASTS
SPOP
0.9975
More...
Q9UGN4
CMRF35-like molecule 8
DEG_SPOP_SBC_1
126:130
PASTS
SPOP
0.8075
More...
Q9UIU6
Homeobox protein SIX4
DEG_SPOP_SBC_1
356:360
PASTS
SPOP
0.6906
More...
Q9ULD8
Potassium voltage-gated channel subfamily H member 3
DEG_SPOP_SBC_1
928:932
PASTS
SPOP
0.9499
More...
Q9Y4C1
Lysine-specific demethylase 3A
DEG_SPOP_SBC_1
815:819
PASTS
SPOP
0.9164
More...
Q9Y520
Protein PRRC2C
DEG_SPOP_SBC_1
1763:1767
PASTS
SPOP
0.9781
More...
Q9Y520
Protein PRRC2C
DEG_SPOP_SBC_1
1778:1782
PASTS
SPOP
0.9401
More...
Q9Y520
Protein PRRC2C
DEG_SPOP_SBC_1
1820:1824
PASTS
SPOP
0.8745
More...
Q9Y5Y7
Lymphatic vessel endothelial hyaluronic acid receptor 1
DEG_SPOP_SBC_1
188:192
PASTS
SPOP
0.5868
More...
Q6IEE8
Schlafen family member 12-like
DEG_SPOP_SBC_1
372:376
PASTS
SPOP
0.7893
More...
Q6NSJ2
Pleckstrin homology-like domain family B member 3
DEG_SPOP_SBC_1
85:89
PASTS
SPOP
0.9511
More...
Q6ZRI6
Uncharacterized protein C15orf39
DEG_SPOP_SBC_1
753:757
PASTS
SPOP
0.9882
More...
Q8N4U5
T-complex protein 11-like protein 2
DEG_SPOP_SBC_1
51:55
PASTS
SPOP
0.9613
More...
A6NNA2
Serine/arginine repetitive matrix protein 3
DEG_SPOP_SBC_1
467:471
PASTS
SPOP
0.9948
More...
A8MTJ6
Forkhead box protein I3
DEG_SPOP_SBC_1
387:391
PASTS
SPOP
0.9013
More...
Q0P670
Uncharacterized protein SPEM2
DEG_SPOP_SBC_1
482:486
PASTS
SPOP
0.9926
More...
Q8NCL8
Transmembrane protein 116
DEG_SPOP_SBC_1
238:242
PASTS
SPOP
0.963
More...
Q8WTZ4
Putative inactive carbonic anhydrase 5B-like protein
DEG_SPOP_SBC_1
5:9
PASTS
SPOP
0.7966
More...