DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PATSS
Uniprot ID:
Q03112
Source protein:
Histone-lysine N-methyltransferase MECOM
Source gene:
MECOM
Class:
DEG_SPOP_SBC_1
Location:
49:53
E3 ligase:
SPOP
DEGRON score:
0.9868
ASA_SCORE:
56.68
COIL:
0.8322
CONS_SCORE:
0.4726
DSS_SCORE:
0.6408
HELIX:
0.1152
FCONS_SCORE:
1.0244
RIG_SCORE:
0.6305
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P57L
TCGA-85-7697
LUSC
TCGA
PATSS
DEG_SPOP_SBC_1
0.2222
p.P57L
SIDM00999
Bladder Carcinoma
GDSC
PATSS
DEG_SPOP_SBC_1
0.2222
p.P57L
639-V
urinary_tract
COSMIC
PATSS
DEG_SPOP_SBC_1
0.2222
p.F48L
TCGA-B5-A1MR
UCEC
TCGA
PATSS
DEG_SPOP_SBC_1
0.3056
p.D45N
TCGA-BF-A1Q0
SKCM
TCGA
PATSS
DEG_SPOP_SBC_1
0.2222
p.D45N
TCGA-EE-A29E
SKCM
TCGA
PATSS
DEG_SPOP_SBC_1
0.2222
p.D45N
TCGA-W3-AA1V
SKCM
TCGA
PATSS
DEG_SPOP_SBC_1
0.2222
p.P46S
TCGA-BR-6452
STAD
TCGA
PATSS
DEG_SPOP_SBC_1
0.25
p.A56S
TCGA-CN-6021
HNSC
TCGA
PATSS
DEG_SPOP_SBC_1
0.25
p.E47K
TCGA-IH-A3EA
SKCM
TCGA
PATSS
DEG_SPOP_SBC_1
0.2778
p.E51K
TCGA-OD-A75X
SKCM
TCGA
PATSS
DEG_SPOP_SBC_1
0.7022
p.M53T
TCGA-XU-A92Q
THYM
TCGA
PATSS
DEG_SPOP_SBC_1
0.7423
p.G61S
DO233693
GACA
ICGC
PATSS
DEG_SPOP_SBC_1
0.1111
p.G61S
DO229502
SKCA
ICGC
PATSS
DEG_SPOP_SBC_1
0.1111
p.T57N
DO229019
LICA
ICGC
PATSS
DEG_SPOP_SBC_1
0.2222
p.S48Y
DO49720
LIHC
ICGC
PATSS
DEG_SPOP_SBC_1
0.3056
p.S40P
DO218923
LUAD
ICGC
PATSS
DEG_SPOP_SBC_1
0.0833
p.S62C
DO230961
LUSC
ICGC
PATSS
DEG_SPOP_SBC_1
0.0833
p.S62C
DO224594
LUSC
ICGC
PATSS
DEG_SPOP_SBC_1
0.0833
p.S62C
SIDM00117
Non-Small Cell Lung Carcinoma
GDSC
PATSS
DEG_SPOP_SBC_1
0.0833
p.S62C
ACH-000837
Lung Cancer
CCLE
PATSS
DEG_SPOP_SBC_1
0.0833
p.S62C
NCI-H322M
lung
COSMIC
PATSS
DEG_SPOP_SBC_1
0.0833
p.P49S
DO229494
SKCA
ICGC
PATSS
DEG_SPOP_SBC_1
0.6752
p.I43F
SIDM01156
Small Cell Lung Carcinoma
GDSC
PATSS
DEG_SPOP_SBC_1
0.1667
p.I43F
ACH-000890
Lung Cancer
CCLE
PATSS
DEG_SPOP_SBC_1
0.1667
p.I43F
SW1271
lung
COSMIC
PATSS
DEG_SPOP_SBC_1
0.1667
p.L41R
SIDM00007
Other Solid Cancers
GDSC
PATSS
DEG_SPOP_SBC_1
0.1111
p.L41R
ACH-001550
Skin Cancer
CCLE
PATSS
DEG_SPOP_SBC_1
0.1111
p.L41R
MCC13
skin
COSMIC
PATSS
DEG_SPOP_SBC_1
0.1111
p.A55T
SIDM00282
Colorectal Carcinoma
GDSC
PATSS
DEG_SPOP_SBC_1
0.2778
p.A55T
ACH-000998
Colon/Colorectal Cancer
CCLE
PATSS
DEG_SPOP_SBC_1
0.2778
p.A55T
CW-2
large_intestine
COSMIC
PATSS
DEG_SPOP_SBC_1
0.2778
p.P63R
SIDM00929
Chondrosarcoma
GDSC
PATSS
DEG_SPOP_SBC_1
0.0556
p.P63R
CAL-78
bone
COSMIC
PATSS
DEG_SPOP_SBC_1
0.0556
p.Q40R
ACH-000955
Colon/Colorectal Cancer
CCLE
PATSS
DEG_SPOP_SBC_1
0.0833
p.Q40R
SNU-407
large_intestine
COSMIC
PATSS
DEG_SPOP_SBC_1
0.0833
p.L41V
ACH-001509
Head and Neck Cancer
CCLE
PATSS
DEG_SPOP_SBC_1
0.1111
p.A53E
MHH-NB-11
autonomic_ganglia
COSMIC
PATSS
DEG_SPOP_SBC_1
0.7701
Drug responses associated with MECOM mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PATSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A6NGG8
Photoreceptor cilium actin regulator
DEG_SPOP_SBC_1
1125:1129
PATSS
SPOP
0.9621
More...
A8CG34
Nuclear envelope pore membrane protein POM 121C
DEG_SPOP_SBC_1
907:911
PATSS
SPOP
0.9948
More...
O60504
Vinexin
DEG_SPOP_SBC_1
189:193
PATSS
SPOP
0.9439
More...
O75081
Protein CBFA2T3
DEG_SPOP_SBC_1
152:156
PATSS
SPOP
0.7702
More...
P28908
Tumor necrosis factor receptor superfamily member 8
DEG_SPOP_SBC_1
184:188
PATSS
SPOP
0.9966
More...
P31270
Homeobox protein Hox-A11
DEG_SPOP_SBC_1
187:191
PATSS
SPOP
0.8903
More...
P35227
Polycomb group RING finger protein 2
DEG_SPOP_SBC_1
270:274
PATSS
SPOP
0.9677
More...
P40200
T-cell surface protein tactile
DEG_SPOP_SBC_1
412:416
PATSS
SPOP
0.9237
More...
P52948
Nuclear pore complex protein Nup98-Nup96
DEG_SPOP_SBC_1
232:236
PATSS
SPOP
0.8979
More...
P54252
Ataxin-3
DEG_SPOP_SBC_1
319:323
PATSS
SPOP
0.9966
More...
Q03112
Histone-lysine N-methyltransferase MECOM
DEG_SPOP_SBC_1
49:53
PATSS
SPOP
0.9868
More...
Q14687
Genetic suppressor element 1
DEG_SPOP_SBC_1
44:48
PATSS
SPOP
0.9439
More...
Q5SSJ5
Heterochromatin protein 1-binding protein 3
DEG_SPOP_SBC_1
87:91
PATSS
SPOP
0.9842
More...
Q63HK5
Teashirt homolog 3
DEG_SPOP_SBC_1
815:819
PATSS
SPOP
0.9964
More...
Q6P4R8
Nuclear factor related to kappa-B-binding protein
DEG_SPOP_SBC_1
892:896
PATSS
SPOP
0.9948
More...
Q8IXZ2
Zinc finger CCCH domain-containing protein 3
DEG_SPOP_SBC_1
364:368
PATSS
SPOP
0.9027
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
1004:1008
PATSS
SPOP
0.9683
More...
Q92502
StAR-related lipid transfer protein 8
DEG_SPOP_SBC_1
61:65
PATSS
SPOP
0.8873
More...
Q92581
Sodium/hydrogen exchanger 6
DEG_SPOP_SBC_1
611:615
PATSS
SPOP
0.9967
More...
Q96CB8
Integrator complex subunit 12
DEG_SPOP_SBC_1
321:325
PATSS
SPOP
0.8945
More...
Q96HA1
Nuclear envelope pore membrane protein POM 121
DEG_SPOP_SBC_1
930:934
PATSS
SPOP
0.9895
More...
Q9H4A3
Serine/threonine-protein kinase WNK1
DEG_SPOP_SBC_1
1357:1361
PATSS
SPOP
0.96
More...
Q9H7N4
Splicing factor, arginine/serine-rich 19
DEG_SPOP_SBC_1
617:621
PATSS
SPOP
0.9725
More...
Q9HBZ2
Aryl hydrocarbon receptor nuclear translocator 2
DEG_SPOP_SBC_1
619:623
PATSS
SPOP
0.9524
More...
Q9HC84
Mucin-5B
DEG_SPOP_SBC_1
1889:1893
PATSS
SPOP
0.9045
More...
Q9HC84
Mucin-5B
DEG_SPOP_SBC_1
4232:4236
PATSS
SPOP
0.6101
More...
Q9HCE9
Anoctamin-8
DEG_SPOP_SBC_1
939:943
PATSS
SPOP
0.7199
More...
Q9NRR5
Ubiquilin-4
DEG_SPOP_SBC_1
521:525
PATSS
SPOP
0.994
More...
Q9UKP3
Integrin beta-1-binding protein 2
DEG_SPOP_SBC_1
78:82
PATSS
SPOP
0.9254
More...
Q9UMN6
Histone-lysine N-methyltransferase 2B
DEG_SPOP_SBC_1
637:641
PATSS
SPOP
0.7297
More...
Q9UPP1
Histone lysine demethylase PHF8
DEG_SPOP_SBC_1
774:778
PATSS
SPOP
0.9112
More...
A6NF01
Putative nuclear envelope pore membrane protein POM 121B
DEG_SPOP_SBC_1
514:518
PATSS
SPOP
0.985
More...
A6NNC1
Putative POM121-like protein 1-like
DEG_SPOP_SBC_1
563:567
PATSS
SPOP
0.9988
More...
A6NNC1
Putative POM121-like protein 1-like
DEG_SPOP_SBC_1
835:839
PATSS
SPOP
0.9635
More...
Q3SYA9
Putative POM121-like protein 1
DEG_SPOP_SBC_1
333:337
PATSS
SPOP
0.9106
More...