Search results: The pahtway p3153 has 84 genes in the original annotation. Currently, there are 58 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group ? Functional group ?
3434IFIT1C56 | G10P1 | IFI-56 | IFI-56K | IFI56 | IFIT-1 | IFNAI1 | ISG56 | P56 | RNM561interferon induced protein with tetratricopeptide repeats 110q23.31CV:PGCnp
PMID:cooccur
2147F2PT | RPRGL2 | THPH1coagulation factor II, thrombin11p11CV:PGCnp
GO_Annotation
PMID:cooccur
627BDNFANON2 | BULN2brain-derived neurotrophic factor11p13Association
CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
GR_COR
GR_Ng
GR_WM
PMID:cooccur
NEUROTROPHIN SIGNALING
Potential synaptic genes
3665IRF7IMD39 | IRF-7H | IRF7A | IRF7B | IRF7C | IRF7Hinterferon regulatory factor 711p15.5CV:PGCnp
PMID:cooccur
391RHOGARHGras homolog family member G11p15.5-p15.4CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
3312HSPA8HEL-33 | HEL-S-72p | HSC54 | HSC70 | HSC71 | HSP71 | HSP73 | HSPA10 | LAP-1 | LAP1 | NIP71heat shock protein family A (Hsp70) member 811q24.1CV:PGCnp
DNM:Fromer_2014
Expression
GSMA_I
PMID:cooccur
RNA AND PROTEIN SYNTHESIS
CompositeSet
5800PTPROGLEPP1 | NPHS6 | PTP-OC | PTP-U2 | PTPROT | PTPU2 | R-PTP-Oprotein tyrosine phosphatase, receptor type O12p13.3-p13.2|12p13-p12CV:GWAScat
CV:PGCnp
PMID:cooccur
3164NR4A1GFRP1 | HMR | N10 | NAK-1 | NGFIB | NP10 | NUR77 | TR3nuclear receptor subfamily 4 group A member 112q13CV:PGCnp
Network
PMID:cooccur
1019CDK4CMM3 | PSK-J3cyclin-dependent kinase 412q14CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
Network
PMID:cooccur
6404SELPLGCD162 | CLA | PSGL-1 | PSGL1selectin P ligand12q24CV:PGCnp
DMG:Montano_2016
Expression
GO_Annotation
10278EFSCAS3 | CASS3 | EFS1 | EFS2 | HEFS | SINembryonal Fyn-associated substrate14q11.2CV:PGCnp
DMG:Wockner_2014
GSMA_I
PMID:cooccur
2353FOSAP-1 | C-FOS | p55FBJ murine osteosarcoma viral oncogene homolog14q24.3CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
567B2MIMD43beta-2-microglobulin15q21.1CV:PGCnp
PMID:cooccur
597BCL2A1ACC-1 | ACC-2 | ACC1 | ACC2 | BCL2L5 | BFL1 | GRS | HBPA1BCL2 related protein A115q24.3CV:GWASdb
CV:PGCnp
1512CTSHACC-4 | ACC-5 | ACC4 | ACC5 | CPSBcathepsin H15q25.1CV:PGCnp
6911TBX6SCDO5T-box 616p11.2CNV:YES
CV:PGCnp
DMG:Wockner_2014
GSMA_IIE
968CD68GP110 | LAMP4 | SCARD1CD68 molecule17p13DEG:Sanders_2013
DMG:vanEijk_2014
PMID:cooccur
37ACADVLACAD6 | LCACD | VLCADacyl-CoA dehydrogenase, very long chain17p13.1CV:PGCnp
DEG:Sanders_2013
DMG:vanEijk_2014
124925SEZ6BSRPCseizure related 6 homolog (mouse)17q11.2CV:PGCnp
DNM:Ambalavanan_2016
PMID:cooccur
2670GFAPALXDRDglial fibrillary acidic protein17q21CV:PGCnp
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
3959LGALS3BP90K | BTBD17B | CyCAP | M2BP | MAC-2-BP | TANGO10B | gp90lectin, galactoside-binding, soluble, 3 binding protein17q25CV:PGCnp
DMG:vanEijk_2014
8175SF3A2PRP11 | PRPF11 | SAP62 | SF3a66splicing factor 3a subunit 219p13.3CV:PGCnp
558AXLARK | JTK11 | Tyro7 | UFOAXL receptor tyrosine kinase19q13.1CV:PGCnp
DMG:Nishioka_2013
DNM:Fromer_2014
GO_Annotation
CompositeSet
348APOEAD2 | APO-E | LDLCQ5 | LPGapolipoprotein E19q13.2Association
Core
GO_Annotation
GR_COR
GR_Ng
GR_WM
Network
PMID:cooccur
CELL METABOLISM
CompositeSet
Darnell FMRP targets
8993PGLYRP1PGLYRP | PGRP | PGRP-S | PGRPS | TAG7 | TNFSF3Lpeptidoglycan recognition protein 119q13.32DMG:Wockner_2014
58155PTBP2PTBLP | brPTB | nPTBpolypyrimidine tract binding protein 21p21.3CV:GWAScat
CV:GWASdb
CV:PGCnp
115361GBP4Mpa2guanylate binding protein 41p22.2DEG:Sanders_2013
7049TGFBR3BGCAN | betaglycantransforming growth factor beta receptor III1p33-p32CV:PGCnp
DMG:vanEijk_2014
Ascano FMRP targets
712C1QA-complement component 1, q subcomponent, A chain1p36.12CV:PGCnp
PMID:cooccur
713C1QB-complement component 1, q subcomponent, B chain1p36.12CV:PGCnp
PMID:cooccur
2058EPRSEARS | GLUPRORS | PARS | PIG32 | QARS | QPRSglutamyl-prolyl-tRNA synthetase1q41GO_Annotation
Network
PMID:cooccur
CompositeSet
Ascano FMRP targets
183AGTANHU | SERPINA8angiotensinogen1q42.2CV:PGCnp
GO_Annotation
PMID:cooccur
6640SNTA1LQT12 | SNT1 | TACIP1 | dJ1187J4.5syntrophin alpha 120q11.2CV:PGCnp
DMG:vanEijk_2014
DNM:Fromer_2014
GO_Annotation
Network
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
1522CTSZCTSXcathepsin Z20q13.32CV:PGCnp
DMG:vanEijk_2014
3162HMOX1HMOX1D | HO-1 | HSP32 | bK286B10heme oxygenase 122q13.1CV:PGCnp
PMID:cooccur
5281PIGF-phosphatidylinositol glycan anchor biosynthesis class F2p21-p16CV:PGCnp
PMID:cooccur
3238HOXD12HOX4Hhomeobox D122q31.1CV:PGCnp
6556SLC11A1LSH | NRAMP | NRAMP1solute carrier family 11 member 12q35CV:GWASdb
GSMA_IIA
GSMA_IIE
3693ITGB5-integrin subunit beta 53q21.2CV:PGCnp
Network
8893EIF2B5CACH | CLE | EIF-2B | EIF2Bepsilon | LVWMeukaryotic translation initiation factor 2B subunit epsilon3q27.1CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
23216TBC1D1TBC | TBC1TBC1 domain family member 14p14CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
Ascano FMRP targets
6696SPP1BNSP | BSPI | ETA-1 | OPNsecreted phosphoprotein 14q22.1CV:PGCnp
CV:PheWAS
3074HEXBENC-1AS | HEL-248 | HEL-S-111hexosaminidase subunit beta5q13CV:PGCnp
GO_Annotation
PMID:cooccur
324APCBTPS2 | DP2 | DP2.5 | DP3 | GS | PPP1R46adenomatous polyposis coli5q21-q22CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
Network
PMID:cooccur
CompositeSet
Darnell FMRP targets
4001LMNB1ADLD | LMN | LMN2 | LMNBlamin B15q23.2CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
GSMA_I
Network
G2Cdb.humanNRC
3119HLA-DQB1CELIAC1 | HLA-DQB | IDDM1major histocompatibility complex, class II, DQ beta 16p21.3CV:GWAScat
CV:GWASdb
CV:PGCnp
GSMA_I
PMID:cooccur
4800NFYACBF-A | CBF-B | HAP2 | NF-YAnuclear transcription factor Y subunit alpha6p21.3CV:GWASdb
DMG:Jaffe_2016
GSMA_I
GSMA_IIE
2550GABBR1GABABR1 | GABBR1-3 | GB1 | GPRC3Agamma-aminobutyric acid type B receptor subunit 16p21.31Association
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GR_COR
GR_Ng
GR_WM
GSMA_I
Network
PMID:cooccur
LIGAND GATED ION SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
7058THBS2TSP2thrombospondin 26q27CV:PGCnp
DMG:Wockner_2014
Expression
Potential synaptic genes
2645GCKFGQTL3 | GK | GLK | HHF3 | HK4 | HKIV | HXKP | LGLK | MODY2glucokinase7p15.3-p15.1CV:PGCnp
DMG:Wockner_2014
2783GNB2-G protein subunit beta 27q22CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
DMG:vanEijk_2014
DMG:Wockner_2014
DNM:Fromer_2014
CANABINOID
DOPAMINE
G-PROTEIN RELAY
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
7328UBE2HE2-20K | GID3 | UBC8 | UBCH | UBCH2ubiquitin conjugating enzyme E2 H7q32CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
4846NOS3ECNOS | eNOSnitric oxide synthase 37q36CV:PGCnp
DNM:Fromer_2014
PMID:cooccur
CompositeSet
3612IMPA1IMP | IMPAinositol(myo)-1(or 4)-monophosphatase 18q21.13-q21.3CV:PGCnp
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
5885RAD21CDLS4 | HR21 | HRAD21 | MCD1 | NXP1 | SCC1 | hHR21RAD21 cohesin complex component8q24CV:PGCnp
6366CCL216Ckine | CKb9 | ECL | SCYA21 | SLC | TCA4C-C motif chemokine ligand 219p13CV:PGCnp
3376IARSIARS1 | ILERS | ILRS | IRS | PRO0785isoleucyl-tRNA synthetase9q21CV:PGCnp
4851NOTCH1AOS5 | AOVD1 | TAN1 | hN1notch 19q34.3CV:PGCnp
Network
PMID:cooccur
Ascano FMRP targets