DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
AESSS
Uniprot ID:
Q9Y4G8
Source protein:
Rap guanine nucleotide exchange factor 2
Source gene:
RAPGEF2
Class:
DEG_SPOP_SBC_1
Location:
1356:1360
E3 ligase:
SPOP
DEGRON score:
0.9966
ASA_SCORE:
78.74
COIL:
0.8064
CONS_SCORE:
0.359
DSS_SCORE:
0.5562
HELIX:
0.1544
FCONS_SCORE:
1.1647
RIG_SCORE:
0.6792
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R1346L
TCGA-73-4662
LUAD
TCGA
AESSS
DEG_SPOP_SBC_1
0.0556
p.R1346L
DO24790
LUAD
ICGC
AESSS
DEG_SPOP_SBC_1
0.0556
p.G1348S
TCGA-D3-A8GM
SKCM
TCGA
AESSS
DEG_SPOP_SBC_1
0.1111
p.G1348S
DO50288
SKCM
ICGC
AESSS
DEG_SPOP_SBC_1
0.1111
p.S1353Y
TCGA-EX-A1H6
CESC
TCGA
AESSS
DEG_SPOP_SBC_1
0.25
p.S1353Y
DO44308
CESC
ICGC
AESSS
DEG_SPOP_SBC_1
0.25
p.T1369A
TCGA-OR-A5LK
ACC
TCGA
AESSS
DEG_SPOP_SBC_1
0.0833
p.R1346W
DO218180
ORCA
ICGC
AESSS
DEG_SPOP_SBC_1
0.0556
p.T1366M
SIDM02049
Pancreatic Carcinoma
GDSC
AESSS
DEG_SPOP_SBC_1
0.1667
p.T1366M
SIDM00662
Melanoma
GDSC
AESSS
DEG_SPOP_SBC_1
0.1667
p.T1366M
SIDM00188
Kidney Carcinoma
GDSC
AESSS
DEG_SPOP_SBC_1
0.1667
p.T1366M
SIDM01711
Non-Cancerous
GDSC
AESSS
DEG_SPOP_SBC_1
0.1667
p.T1366M
Hs940-T
skin
COSMIC
AESSS
DEG_SPOP_SBC_1
0.1667
p.R1347S
SIDM00250
Esophageal Squamous Cell Carcinoma
GDSC
AESSS
DEG_SPOP_SBC_1
0.0833
p.R1347S
ACH-000917
Esophageal Cancer
CCLE
AESSS
DEG_SPOP_SBC_1
0.0833
p.R1347S
TE-4
oesophagus
COSMIC
AESSS
DEG_SPOP_SBC_1
0.0833
p.L1361P
SIDM01608
Endometrial Carcinoma
GDSC
AESSS
DEG_SPOP_SBC_1
0.3056
p.L1361P
ACH-000990
Endometrial/Uterine Cancer
CCLE
AESSS
DEG_SPOP_SBC_1
0.3056
p.T1362R
ACH-000836
Head and Neck Cancer
CCLE
AESSS
DEG_SPOP_SBC_1
0.2778
p.S1361C
SK-LU-1
lung
COSMIC
AESSS
DEG_SPOP_SBC_1
0.3056
Drug responses associated with RAPGEF2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of AESSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A4D2B8
Putative postmeiotic segregation increased 2-like protein 1
DEG_SPOP_SBC_1
204:208
AESSS
SPOP
0.7952
More...
O15021
Microtubule-associated serine/threonine-protein kinase 4
DEG_SPOP_SBC_1
39:43
AESSS
SPOP
0.9974
More...
O75132
Zinc finger BED domain-containing protein 4
DEG_SPOP_SBC_1
531:535
AESSS
SPOP
0.9433
More...
O75140
GATOR complex protein DEPDC5
DEG_SPOP_SBC_1
1071:1075
AESSS
SPOP
0.994
More...
O95425
Supervillin
DEG_SPOP_SBC_1
224:228
AESSS
SPOP
0.9913
More...
P21127
Cyclin-dependent kinase 11B
DEG_SPOP_SBC_1
292:296
AESSS
SPOP
0.9672
More...
P21802
Fibroblast growth factor receptor 2
DEG_SPOP_SBC_1
432:436
AESSS
SPOP
0.9911
More...
P52756
RNA-binding protein 5
DEG_SPOP_SBC_1
509:513
AESSS
SPOP
0.6044
More...
Q02410
Amyloid-beta A4 precursor protein-binding family A member 1
DEG_SPOP_SBC_1
412:416
AESSS
SPOP
0.8001
More...
Q0JRZ9
F-BAR domain only protein 2
DEG_SPOP_SBC_1
506:510
AESSS
SPOP
0.9995
More...
Q14493
Histone RNA hairpin-binding protein
DEG_SPOP_SBC_1
218:222
AESSS
SPOP
0.504
More...
Q14966
Zinc finger protein 638
DEG_SPOP_SBC_1
1450:1454
AESSS
SPOP
0.9979
More...
Q14978
Nucleolar and coiled-body phosphoprotein 1
DEG_SPOP_SBC_1
359:363
AESSS
SPOP
0.9466
More...
Q15054
DNA polymerase delta subunit 3
DEG_SPOP_SBC_1
146:150
AESSS
SPOP
0.8262
More...
Q2LD37
Transmembrane protein KIAA1109
DEG_SPOP_SBC_1
3437:3441
AESSS
SPOP
0.631
More...
Q58EX2
Protein sidekick-2
DEG_SPOP_SBC_1
2039:2043
AESSS
SPOP
0.9996
More...
Q5VST9
Obscurin
DEG_SPOP_SBC_1
4995:4999
AESSS
SPOP
0.9626
More...
Q63ZY3
KN motif and ankyrin repeat domain-containing protein 2
DEG_SPOP_SBC_1
423:427
AESSS
SPOP
0.9784
More...
Q68EM7
Rho GTPase-activating protein 17
DEG_SPOP_SBC_1
549:553
AESSS
SPOP
0.9662
More...
Q6ZU52
Uncharacterized protein KIAA0408
DEG_SPOP_SBC_1
416:420
AESSS
SPOP
0.8744
More...
Q8IVF5
Rho guanine nucleotide exchange factor TIAM2
DEG_SPOP_SBC_1
483:487
AESSS
SPOP
0.8917
More...
Q8IVL1
Neuron navigator 2
DEG_SPOP_SBC_1
712:716
AESSS
SPOP
0.6639
More...
Q8NFG4
Folliculin
DEG_SPOP_SBC_1
327:331
AESSS
SPOP
0.9547
More...
Q8WWQ0
PH-interacting protein
DEG_SPOP_SBC_1
877:881
AESSS
SPOP
0.7427
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
10859:10863
AESSS
SPOP
0.9546
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
11301:11305
AESSS
SPOP
0.5459
More...
Q92622
Run domain Beclin-1-interacting and cysteine-rich domain-containing protein
DEG_SPOP_SBC_1
346:350
AESSS
SPOP
0.9802
More...
Q96FF9
Sororin
DEG_SPOP_SBC_1
122:126
AESSS
SPOP
0.5091
More...
Q9BRP0
Transcription factor Ovo-like 2
DEG_SPOP_SBC_1
68:72
AESSS
SPOP
0.7978
More...
Q9H4L7
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1
DEG_SPOP_SBC_1
243:247
AESSS
SPOP
0.9849
More...
Q9UL62
Short transient receptor potential channel 5
DEG_SPOP_SBC_1
829:833
AESSS
SPOP
0.9986
More...
Q9UQ88
Cyclin-dependent kinase 11A
DEG_SPOP_SBC_1
280:284
AESSS
SPOP
0.9779
More...
Q9Y4G8
Rap guanine nucleotide exchange factor 2
DEG_SPOP_SBC_1
1356:1360
AESSS
SPOP
0.9966
More...
Q9Y4J8
Dystrobrevin alpha
DEG_SPOP_SBC_1
446:450
AESSS
SPOP
0.8361
More...
Q6ZU80
Centrosomal protein of 128 kDa
DEG_SPOP_SBC_1
2:6
AESSS
SPOP
0.5106
More...
Q93073
Selenocysteine insertion sequence-binding protein 2-like
DEG_SPOP_SBC_1
255:259
AESSS
SPOP
0.9947
More...
O60320
Protein FAM189A1
DEG_SPOP_SBC_1
318:322
AESSS
SPOP
0.8116
More...
Q6NV74
CRACD-like protein
DEG_SPOP_SBC_1
213:217
AESSS
SPOP
0.8849
More...