DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
PESSS
Uniprot ID:
Q9Y2L6
Source protein:
FERM domain-containing protein 4B
Source gene:
FRMD4B
Class:
DEG_SPOP_SBC_1
Location:
681:685
E3 ligase:
SPOP
DEGRON score:
0.9815
ASA_SCORE:
83.76
COIL:
0.827
CONS_SCORE:
0.3526
DSS_SCORE:
0.6799
HELIX:
0.1396
FCONS_SCORE:
1.0079
RIG_SCORE:
0.5728
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R691W
TCGA-32-2616
GBM
TCGA
PESSS
DEG_SPOP_SBC_1
0.1667
p.R691W
DO13462
GBM
ICGC
PESSS
DEG_SPOP_SBC_1
0.1667
p.S684L
TCGA-AP-A1DP
UCEC
TCGA
PESSS
DEG_SPOP_SBC_1
0.7667
p.S684L
DO42336
UCEC
ICGC
PESSS
DEG_SPOP_SBC_1
0.7667
p.H687N
DO229019
LICA
ICGC
PESSS
DEG_SPOP_SBC_1
0.2778
p.R691Q
DO228263
MALY
ICGC
PESSS
DEG_SPOP_SBC_1
0.1667
p.S685C
SIDM00670
Pancreatic Carcinoma
GDSC
PESSS
DEG_SPOP_SBC_1
0.7541
p.S685C
SIDM00123
Kidney Carcinoma
GDSC
PESSS
DEG_SPOP_SBC_1
0.7541
p.D679Y
SK-N-DZ
autonomic_ganglia
COSMIC
PESSS
DEG_SPOP_SBC_1
0.2778
Drug responses associated with FRMD4B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PESSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A1L390
Pleckstrin homology domain-containing family G member 3
DEG_SPOP_SBC_1
866:870
PESSS
SPOP
0.9912
More...
P16112
Aggrecan core protein
DEG_SPOP_SBC_1
2097:2101
PESSS
SPOP
0.9834
More...
P20749
B-cell lymphoma 3 protein
DEG_SPOP_SBC_1
383:387
PESSS
SPOP
0.9491
More...
P31270
Homeobox protein Hox-A11
DEG_SPOP_SBC_1
216:220
PESSS
SPOP
0.8558
More...
P31270
Homeobox protein Hox-A11
DEG_SPOP_SBC_1
222:226
PESSS
SPOP
0.9936
More...
P49815
Tuberin
DEG_SPOP_SBC_1
1092:1096
PESSS
SPOP
0.9782
More...
P78426
Homeobox protein Nkx-6.1
DEG_SPOP_SBC_1
363:367
PESSS
SPOP
0.998
More...
Q03164
Histone-lysine N-methyltransferase 2A
DEG_SPOP_SBC_1
2867:2871
PESSS
SPOP
0.9742
More...
Q12918
Killer cell lectin-like receptor subfamily B member 1
DEG_SPOP_SBC_1
18:22
PESSS
SPOP
0.7957
More...
Q13501
Sequestosome-1
DEG_SPOP_SBC_1
273:277
PESSS
SPOP
0.8106
More...
Q14CM0
FERM and PDZ domain-containing protein 4
DEG_SPOP_SBC_1
901:905
PESSS
SPOP
0.9985
More...
Q5JY77
G-protein coupled receptor-associated sorting protein 1
DEG_SPOP_SBC_1
1137:1141
PESSS
SPOP
0.6247
More...
Q5TCQ9
Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3
DEG_SPOP_SBC_1
1446:1450
PESSS
SPOP
0.9938
More...
Q6UB98
Ankyrin repeat domain-containing protein 12
DEG_SPOP_SBC_1
592:596
PESSS
SPOP
0.9159
More...
Q6V0I7
Protocadherin Fat 4
DEG_SPOP_SBC_1
4836:4840
PESSS
SPOP
0.8987
More...
Q86XP3
ATP-dependent RNA helicase DDX42
DEG_SPOP_SBC_1
847:851
PESSS
SPOP
0.8412
More...
Q9BSD3
RAD9, HUS1, RAD1-interacting nuclear orphan protein 1
DEG_SPOP_SBC_1
160:164
PESSS
SPOP
0.9875
More...
Q9C0C2
182 kDa tankyrase-1-binding protein
DEG_SPOP_SBC_1
678:682
PESSS
SPOP
0.8779
More...
Q9H8Y8
Golgi reassembly-stacking protein 2
DEG_SPOP_SBC_1
372:376
PESSS
SPOP
0.9842
More...
Q9P275
Ubiquitin carboxyl-terminal hydrolase 36
DEG_SPOP_SBC_1
989:993
PESSS
SPOP
0.7219
More...
Q9Y6Q2
Stonin-1
DEG_SPOP_SBC_1
106:110
PESSS
SPOP
0.9755
More...
A6NI28
Rho GTPase-activating protein 42
DEG_SPOP_SBC_1
684:688
PESSS
SPOP
0.9972
More...
Q6T310
Ras-like protein family member 11A
DEG_SPOP_SBC_1
16:20
PESSS
SPOP
0.5145
More...
Q7L1V2
Vacuolar fusion protein MON1 homolog B
DEG_SPOP_SBC_1
89:93
PESSS
SPOP
0.8405
More...
Q8TD94
Krueppel-like factor 14
DEG_SPOP_SBC_1
141:145
PESSS
SPOP
0.99
More...
Q96JQ2
Calmin
DEG_SPOP_SBC_1
482:486
PESSS
SPOP
0.7996
More...
Q96S82
Ubiquitin-like protein 7
DEG_SPOP_SBC_1
282:286
PESSS
SPOP
0.92
More...
Q9Y2L6
FERM domain-containing protein 4B
DEG_SPOP_SBC_1
681:685
PESSS
SPOP
0.9815
More...
Q64ET8
Protein FRG2
DEG_SPOP_SBC_1
86:90
PESSS
SPOP
0.6784
More...
A6NGH7
Coiled-coil domain-containing protein 160
DEG_SPOP_SBC_1
29:33
PESSS
SPOP
0.9785
More...
A6NGY1
Protein FRG2-like-2
DEG_SPOP_SBC_1
87:91
PESSS
SPOP
0.8535
More...
Q3LI81
Keratin-associated protein 27-1
DEG_SPOP_SBC_1
168:172
PESSS
SPOP
0.6466
More...
Q8ND24
RING finger protein 214
DEG_SPOP_SBC_1
17:21
PESSS
SPOP
0.9867
More...
Q96QU4
Protein FRG2-like-1
DEG_SPOP_SBC_1
86:90
PESSS
SPOP
0.8637
More...