DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PPSTS
Uniprot ID:
O14746
Source protein:
Telomerase reverse transcriptase
Source gene:
TERT
Class:
DEG_SPOP_SBC_1
Location:
307:311
E3 ligase:
SPOP
DEGRON score:
0.9923
ASA_SCORE:
73.72
COIL:
0.9274
CONS_SCORE:
0.3277
DSS_SCORE:
0.7478
HELIX:
0.0508
FCONS_SCORE:
1.0778
RIG_SCORE:
0.4743
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A305V
TCGA-EO-A22R
UCEC
TCGA
PPSTS
DEG_SPOP_SBC_1
0.2778
p.A305V
DO42713
UCEC
ICGC
PPSTS
DEG_SPOP_SBC_1
0.2778
p.S311L
TCGA-FR-A726
SKCM
TCGA
PPSTS
DEG_SPOP_SBC_1
0.7667
p.S311L
DO220875
MELA
ICGC
PPSTS
DEG_SPOP_SBC_1
0.7667
p.S311L
DO48665
SKCM
ICGC
PPSTS
DEG_SPOP_SBC_1
0.7667
p.P316L
TCGA-LK-A4O5
MESO
TCGA
PPSTS
DEG_SPOP_SBC_1
0.1944
p.A305T
DO50581
BOCA
ICGC
PPSTS
DEG_SPOP_SBC_1
0.2778
p.P297Q
DO229031
LICA
ICGC
PPSTS
DEG_SPOP_SBC_1
0.0556
p.A305S
DO27326
LUSC
ICGC
PPSTS
DEG_SPOP_SBC_1
0.2778
p.V299L
SIDM00183
Small Cell Lung Carcinoma
GDSC
PPSTS
DEG_SPOP_SBC_1
0.1111
p.V299L
ACH-002154
Lung Cancer
CCLE
PPSTS
DEG_SPOP_SBC_1
0.1111
p.V299L
LB647-SCLC
lung
COSMIC
PPSTS
DEG_SPOP_SBC_1
0.1111
p.R301H
SIDM01618
B-Lymphoblastic Leukemia
GDSC
PPSTS
DEG_SPOP_SBC_1
0.1667
p.R301H
ACH-000945
Lung Cancer
CCLE
PPSTS
DEG_SPOP_SBC_1
0.1667
Drug responses associated with TERT mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
SIDM00145
ALL|lymphoblastic_leukemia
p.H752R (No)
GDSC
BIBR-1532
108.11
SIDM00683
PRAD|prostate
p.R865C (No)
GDSC
BIBR-1532
20.518
SIDM00901
UCEC|endometrium
p.D848G (No)
GDSC
BIBR-1532
78.345
SIDM00797
SKCM|melanoma
p.T726P (No)
GDSC
BIBR-1532
60.717
SIDM00199
UNCLASSIFIED|bone_other
p.A779T (No)
GDSC
BIBR-1532
98.897
SIDM01007
ALL|lymphoblastic_leukemia
p.V741M (No)
GDSC
BIBR-1532
50.106
SIDM01088
UNCLASSIFIED|endometrium
p.V639I (No)
GDSC
BIBR-1532
104.09
SIDM00958
LCML|chronic_myeloid_leukaemia
p.R743Q (No)
GDSC
BIBR-1532
42.62
SIDM00003
SKCM|melanoma
p.Q1024H (No)
GDSC
BIBR-1532
126.95
SIDM00887
MB|medulloblastoma
p.R972H (No)
GDSC
BIBR-1532
64.393
SIDM01133
UNCLASSIFIED|lung_NSCLC_carcinoid
p.P530L (No)
GDSC
BIBR-1532
42.097
SIDM00333
UCEC|endometrium
p.A615V (No)
GDSC
BIBR-1532
171.57
SIDM00999
BLCA|bladder
p.T878A (No)
GDSC
BIBR-1532
47.257
SIDM01047
LCML|chronic_myeloid_leukaemia
p.V898A (No)
GDSC
BIBR-1532
98.564
SIDM00216
COREAD|large_intestine
p.A801T (No)
GDSC
BIBR-1532
147.29
SIDM00216
COREAD|large_intestine
p.R743W (No)
GDSC
BIBR-1532
147.29
SIDM00216
COREAD|large_intestine
p.Q506* (No)
GDSC
BIBR-1532
147.29
SIDM00596
UCEC|endometrium
p.R521H (No)
GDSC
BIBR-1532
75.996
SIDM00660
COREAD|large_intestine
p.V640M (No)
GDSC
BIBR-1532
103.3
SIDM00567
MB|medulloblastoma
p.R938L (No)
GDSC
BIBR-1532
159.47
SIDM00783
COREAD|large_intestine
p.E484K (No)
GDSC
BIBR-1532
57.361
SIDM00328
ESCA|oesophagus
p.E1068K (No)
GDSC
BIBR-1532
351.56
SIDM00537
COREAD|large_intestine
p.D807G (No)
GDSC
BIBR-1532
86.143
SIDM01062
BRCA|breast
p.V746M (No)
GDSC
BIBR-1532
154.11
SIDM01062
BRCA|breast
p.L520V (No)
GDSC
BIBR-1532
154.11
All proteins holding degron of PPSTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O00160
Unconventional myosin-If
DEG_SPOP_SBC_1
984:988
PPSTS
SPOP
0.9842
More...
O14746
Telomerase reverse transcriptase
DEG_SPOP_SBC_1
307:311
PPSTS
SPOP
0.9923
More...
O15018
PDZ domain-containing protein 2
DEG_SPOP_SBC_1
904:908
PPSTS
SPOP
0.8193
More...
O43516
WAS/WASL-interacting protein family member 1
DEG_SPOP_SBC_1
432:436
PPSTS
SPOP
0.9568
More...
O43526
Potassium voltage-gated channel subfamily KQT member 2
DEG_SPOP_SBC_1
713:717
PPSTS
SPOP
0.8569
More...
O60312
Phospholipid-transporting ATPase VA
DEG_SPOP_SBC_1
959:963
PPSTS
SPOP
0.8225
More...
O75175
CCR4-NOT transcription complex subunit 3
DEG_SPOP_SBC_1
465:469
PPSTS
SPOP
0.8566
More...
O94933
SLIT and NTRK-like protein 3
DEG_SPOP_SBC_1
344:348
PPSTS
SPOP
0.5069
More...
P16150
Leukosialin
DEG_SPOP_SBC_1
66:70
PPSTS
SPOP
0.9993
More...
P35658
Nuclear pore complex protein Nup214
DEG_SPOP_SBC_1
577:581
PPSTS
SPOP
0.9911
More...
Q09472
Histone acetyltransferase p300
DEG_SPOP_SBC_1
954:958
PPSTS
SPOP
0.9959
More...
Q12830
Nucleosome-remodeling factor subunit BPTF
DEG_SPOP_SBC_1
84:88
PPSTS
SPOP
0.9962
More...
Q13207
T-box transcription factor TBX2
DEG_SPOP_SBC_1
631:635
PPSTS
SPOP
0.9985
More...
Q14676
Mediator of DNA damage checkpoint protein 1
DEG_SPOP_SBC_1
1374:1378
PPSTS
SPOP
0.9728
More...
Q14938
Nuclear factor 1 X-type
DEG_SPOP_SBC_1
269:273
PPSTS
SPOP
0.9824
More...
Q7Z570
Zinc finger protein 804A
DEG_SPOP_SBC_1
798:802
PPSTS
SPOP
0.9948
More...
Q7Z7A4
PX domain-containing protein kinase-like protein
DEG_SPOP_SBC_1
505:509
PPSTS
SPOP
0.794
More...
Q86TM6
E3 ubiquitin-protein ligase synoviolin
DEG_SPOP_SBC_1
406:410
PPSTS
SPOP
0.9932
More...
Q92918
Mitogen-activated protein kinase kinase kinase kinase 1
DEG_SPOP_SBC_1
442:446
PPSTS
SPOP
0.9477
More...
Q9BQ89
Protein FAM110A
DEG_SPOP_SBC_1
145:149
PPSTS
SPOP
0.8404
More...
Q9NS91
E3 ubiquitin-protein ligase RAD18
DEG_SPOP_SBC_1
190:194
PPSTS
SPOP
0.91
More...
Q9NYQ6
Cadherin EGF LAG seven-pass G-type receptor 1
DEG_SPOP_SBC_1
906:910
PPSTS
SPOP
0.9655
More...
Q9UHV7
Mediator of RNA polymerase II transcription subunit 13
DEG_SPOP_SBC_1
765:769
PPSTS
SPOP
0.9907
More...
Q9UMN6
Histone-lysine N-methyltransferase 2B
DEG_SPOP_SBC_1
419:423
PPSTS
SPOP
0.9758
More...
Q9UPN9
E3 ubiquitin-protein ligase TRIM33
DEG_SPOP_SBC_1
742:746
PPSTS
SPOP
0.9525
More...
Q9Y520
Protein PRRC2C
DEG_SPOP_SBC_1
1755:1759
PPSTS
SPOP
0.9881
More...
Q96M27
Protein PRRC1
DEG_SPOP_SBC_1
111:115
PPSTS
SPOP
0.9952
More...
Q5T8I3
Protein FAM102B
DEG_SPOP_SBC_1
152:156
PPSTS
SPOP
0.978
More...
Q96KW2
POM121-like protein 2
DEG_SPOP_SBC_1
130:134
PPSTS
SPOP
0.5646
More...
Q96KW2
POM121-like protein 2
DEG_SPOP_SBC_1
483:487
PPSTS
SPOP
0.9614
More...
Q8IXP5
Uncharacterized protein C11orf53
DEG_SPOP_SBC_1
130:134
PPSTS
SPOP
0.9669
More...