DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PQSSS
Uniprot ID:
O15027
Source protein:
Protein transport protein Sec16A
Source gene:
SEC16A
Class:
DEG_SPOP_SBC_1
Location:
1117:1121
E3 ligase:
SPOP
DEGRON score:
0.9855
ASA_SCORE:
92.16
COIL:
0.9372
CONS_SCORE:
0.3038
DSS_SCORE:
0.6973
HELIX:
0.0444
FCONS_SCORE:
1.3225
RIG_SCORE:
0.5705
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S1121G
TCGA-05-4397
LUAD
TCGA
PQSSS
DEG_SPOP_SBC_1
0.6993
p.S1121G
DO25320
LUAD
ICGC
PQSSS
DEG_SPOP_SBC_1
0.6993
p.A1108V
TCGA-BG-A221
UCEC
TCGA
PQSSS
DEG_SPOP_SBC_1
0.0833
p.A1108V
DO42384
UCEC
ICGC
PQSSS
DEG_SPOP_SBC_1
0.0833
p.P1114T
TCGA-DZ-6135
KIRP
TCGA
PQSSS
DEG_SPOP_SBC_1
0.25
p.P1114T
DO20926
KIRP
ICGC
PQSSS
DEG_SPOP_SBC_1
0.25
p.Q1118K
DO472
BLCA
ICGC
PQSSS
DEG_SPOP_SBC_1
0.5833
p.S1121N
DO228215
LICA
ICGC
PQSSS
DEG_SPOP_SBC_1
0.7069
p.A1108E
DO229015
LICA
ICGC
PQSSS
DEG_SPOP_SBC_1
0.0833
p.D1107E
DO229009
LICA
ICGC
PQSSS
DEG_SPOP_SBC_1
0.0556
p.Q1110H
DO52354
LUSC
ICGC
PQSSS
DEG_SPOP_SBC_1
0.1389
p.G1130C
SIDM01724
Melanoma
GDSC
PQSSS
DEG_SPOP_SBC_1
0.0833
p.A1121T
ACH-000948
Gastric Cancer
CCLE
PQSSS
DEG_SPOP_SBC_1
0.7139
p.A1121T
ACH-000964
Leukemia
CCLE
PQSSS
DEG_SPOP_SBC_1
0.7139
p.A1121T
ACH-000989
Colon/Colorectal Cancer
CCLE
PQSSS
DEG_SPOP_SBC_1
0.7139
p.A1121T
SNU-175
large_intestine
COSMIC
PQSSS
DEG_SPOP_SBC_1
0.7139
p.A1121T
23132-87
stomach
COSMIC
PQSSS
DEG_SPOP_SBC_1
0.7139
Drug responses associated with SEC16A mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PQSSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15027
Protein transport protein Sec16A
DEG_SPOP_SBC_1
1117:1121
PQSSS
SPOP
0.9855
More...
O60271
C-Jun-amino-terminal kinase-interacting protein 4
DEG_SPOP_SBC_1
1239:1243
PQSSS
SPOP
0.9213
More...
O95409
Zinc finger protein ZIC 2
DEG_SPOP_SBC_1
447:451
PQSSS
SPOP
0.931
More...
O95835
Serine/threonine-protein kinase LATS1
DEG_SPOP_SBC_1
434:438
PQSSS
SPOP
0.9911
More...
O96013
Serine/threonine-protein kinase PAK 4
DEG_SPOP_SBC_1
240:244
PQSSS
SPOP
0.6645
More...
P0CB47
Upstream-binding factor 1-like protein 1
DEG_SPOP_SBC_1
325:329
PQSSS
SPOP
0.8335
More...
P15884
Transcription factor 4
DEG_SPOP_SBC_1
249:253
PQSSS
SPOP
0.9306
More...
P22004
Bone morphogenetic protein 6
DEG_SPOP_SBC_1
60:64
PQSSS
SPOP
0.674
More...
P31629
Transcription factor HIVEP2
DEG_SPOP_SBC_1
1582:1586
PQSSS
SPOP
0.989
More...
P49023
Paxillin
DEG_SPOP_SBC_1
81:85
PQSSS
SPOP
0.9894
More...
Q02930
Cyclic AMP-responsive element-binding protein 5
DEG_SPOP_SBC_1
138:142
PQSSS
SPOP
0.9993
More...
Q15147
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4
DEG_SPOP_SBC_1
887:891
PQSSS
SPOP
0.997
More...
Q2TAZ0
Autophagy-related protein 2 homolog A
DEG_SPOP_SBC_1
742:746
PQSSS
SPOP
0.9683
More...
Q5TCM9
Late cornified envelope protein 5A
DEG_SPOP_SBC_1
82:86
PQSSS
SPOP
0.798
More...
Q6UY09
Carcinoembryonic antigen-related cell adhesion molecule 20
DEG_SPOP_SBC_1
438:442
PQSSS
SPOP
0.8914
More...
Q8IVL0
Neuron navigator 3
DEG_SPOP_SBC_1
299:303
PQSSS
SPOP
0.8349
More...
Q8NCP5
Zinc finger and BTB domain-containing protein 44
DEG_SPOP_SBC_1
334:338
PQSSS
SPOP
0.902
More...
Q8NFU7
Methylcytosine dioxygenase TET1
DEG_SPOP_SBC_1
477:481
PQSSS
SPOP
0.9239
More...
Q8NHY3
GAS2-like protein 2
DEG_SPOP_SBC_1
384:388
PQSSS
SPOP
0.9783
More...
Q8TDM6
Disks large homolog 5
DEG_SPOP_SBC_1
797:801
PQSSS
SPOP
0.9776
More...
Q8WXI9
Transcriptional repressor p66-beta
DEG_SPOP_SBC_1
300:304
PQSSS
SPOP
0.9946
More...
Q8WYB5
Histone acetyltransferase KAT6B
DEG_SPOP_SBC_1
519:523
PQSSS
SPOP
0.9325
More...
Q9BSD3
RAD9, HUS1, RAD1-interacting nuclear orphan protein 1
DEG_SPOP_SBC_1
99:103
PQSSS
SPOP
0.9292
More...
Q9BWV1
Brother of CDO
DEG_SPOP_SBC_1
592:596
PQSSS
SPOP
0.7123
More...
Q9H5V7
Zinc finger protein Pegasus
DEG_SPOP_SBC_1
305:309
PQSSS
SPOP
0.6593
More...
Q9NSC2
Sal-like protein 1
DEG_SPOP_SBC_1
322:326
PQSSS
SPOP
0.9692
More...
Q9ULI3
Protein HEG homolog 1
DEG_SPOP_SBC_1
739:743
PQSSS
SPOP
0.9901
More...
Q9UNW9
RNA-binding protein Nova-2
DEG_SPOP_SBC_1
204:208
PQSSS
SPOP
0.9633
More...
Q9UQ35
Serine/arginine repetitive matrix protein 2
DEG_SPOP_SBC_1
413:417
PQSSS
SPOP
0.9895
More...
E9PAV3
Nascent polypeptide-associated complex subunit alpha, muscle-specific form
DEG_SPOP_SBC_1
83:87
PQSSS
SPOP
0.8965
More...
Q5T8P6
RNA-binding protein 26
DEG_SPOP_SBC_1
129:133
PQSSS
SPOP
0.9781
More...
F5H4B4
Protein FAM227A
DEG_SPOP_SBC_1
345:349
PQSSS
SPOP
0.9381
More...
P0CB48
Putative upstream-binding factor 1-like protein 6
DEG_SPOP_SBC_1
332:336
PQSSS
SPOP
0.5892
More...