DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
PQSSS
Uniprot ID:
Q15147
Source protein:
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4
Source gene:
PLCB4
Class:
DEG_SPOP_SBC_1
Location:
887:891
E3 ligase:
SPOP
DEGRON score:
0.997
ASA_SCORE:
86.4
COIL:
0.874
CONS_SCORE:
0.2552
DSS_SCORE:
0.6157
HELIX:
0.1102
FCONS_SCORE:
1.072
RIG_SCORE:
0.6475
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A881T
TCGA-02-2470
GBM
TCGA
PQSSS
DEG_SPOP_SBC_1
0.1667
p.A881T
TCGA-EI-6881
READ
TCGA
PQSSS
DEG_SPOP_SBC_1
0.1667
p.A881T
DO13516
GBM
ICGC
PQSSS
DEG_SPOP_SBC_1
0.1667
p.A881T
DO37098
READ
ICGC
PQSSS
DEG_SPOP_SBC_1
0.1667
p.P895S
TCGA-39-5019
LUSC
TCGA
PQSSS
DEG_SPOP_SBC_1
0.2222
p.P895S
DO26538
LUSC
ICGC
PQSSS
DEG_SPOP_SBC_1
0.2222
p.Q888H
TCGA-69-7979
LUAD
TCGA
PQSSS
DEG_SPOP_SBC_1
0.647
p.Q888H
DO23874
LUAD
ICGC
PQSSS
DEG_SPOP_SBC_1
0.647
p.A878T
TCGA-86-A4JF
LUAD
TCGA
PQSSS
DEG_SPOP_SBC_1
0.0833
p.A878T
TCGA-DX-AB2E
SARC
TCGA
PQSSS
DEG_SPOP_SBC_1
0.0833
p.A878T
DO45317
LUAD
ICGC
PQSSS
DEG_SPOP_SBC_1
0.0833
p.A878T
DO220073
SARC
ICGC
PQSSS
DEG_SPOP_SBC_1
0.0833
p.P887H
TCGA-BF-A1PU
SKCM
TCGA
PQSSS
DEG_SPOP_SBC_1
0.7694
p.P887H
DO50278
SKCM
ICGC
PQSSS
DEG_SPOP_SBC_1
0.7694
p.S890I
TCGA-BH-A0DE
BRCA
TCGA
PQSSS
DEG_SPOP_SBC_1
0.8453
p.S890I
DO2688
BRCA
ICGC
PQSSS
DEG_SPOP_SBC_1
0.8453
p.S890I
DO222539
ESCA
ICGC
PQSSS
DEG_SPOP_SBC_1
0.8453
p.S891T
TCGA-CN-4739
HNSC
TCGA
PQSSS
DEG_SPOP_SBC_1
0.6005
p.S891T
DO14478
HNSC
ICGC
PQSSS
DEG_SPOP_SBC_1
0.6005
p.T898M
TCGA-E9-A248
BRCA
TCGA
PQSSS
DEG_SPOP_SBC_1
0.1389
p.T898M
DO1191
BRCA
ICGC
PQSSS
DEG_SPOP_SBC_1
0.1389
p.T898M
DO3328
BRCA
ICGC
PQSSS
DEG_SPOP_SBC_1
0.1389
p.A881S
DO229036
LICA
ICGC
PQSSS
DEG_SPOP_SBC_1
0.1667
p.A881S
DO25189
LUAD
ICGC
PQSSS
DEG_SPOP_SBC_1
0.1667
p.S889R
SIDM00933
Breast Carcinoma
GDSC
PQSSS
DEG_SPOP_SBC_1
0.8538
p.S889R
ACH-000856
Breast Cancer
CCLE
PQSSS
DEG_SPOP_SBC_1
0.8538
p.S889R
CAL-51
breast
COSMIC
PQSSS
DEG_SPOP_SBC_1
0.8538
p.P895Q
SIDM01471
Chronic Myelogenous Leukemia
GDSC
PQSSS
DEG_SPOP_SBC_1
0.2222
p.P895Q
ACH-000604
Leukemia
CCLE
PQSSS
DEG_SPOP_SBC_1
0.2222
p.S901R
CAL-51
breast
COSMIC
PQSSS
DEG_SPOP_SBC_1
0.0556
p.G888E
MZ2-MEL
skin
COSMIC
PQSSS
DEG_SPOP_SBC_1
0.7199
Drug responses associated with PLCB4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PQSSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15027
Protein transport protein Sec16A
DEG_SPOP_SBC_1
1117:1121
PQSSS
SPOP
0.9855
More...
O60271
C-Jun-amino-terminal kinase-interacting protein 4
DEG_SPOP_SBC_1
1239:1243
PQSSS
SPOP
0.9213
More...
O95409
Zinc finger protein ZIC 2
DEG_SPOP_SBC_1
447:451
PQSSS
SPOP
0.931
More...
O95835
Serine/threonine-protein kinase LATS1
DEG_SPOP_SBC_1
434:438
PQSSS
SPOP
0.9911
More...
O96013
Serine/threonine-protein kinase PAK 4
DEG_SPOP_SBC_1
240:244
PQSSS
SPOP
0.6645
More...
P0CB47
Upstream-binding factor 1-like protein 1
DEG_SPOP_SBC_1
325:329
PQSSS
SPOP
0.8335
More...
P15884
Transcription factor 4
DEG_SPOP_SBC_1
249:253
PQSSS
SPOP
0.9306
More...
P22004
Bone morphogenetic protein 6
DEG_SPOP_SBC_1
60:64
PQSSS
SPOP
0.674
More...
P31629
Transcription factor HIVEP2
DEG_SPOP_SBC_1
1582:1586
PQSSS
SPOP
0.989
More...
P49023
Paxillin
DEG_SPOP_SBC_1
81:85
PQSSS
SPOP
0.9894
More...
Q02930
Cyclic AMP-responsive element-binding protein 5
DEG_SPOP_SBC_1
138:142
PQSSS
SPOP
0.9993
More...
Q15147
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4
DEG_SPOP_SBC_1
887:891
PQSSS
SPOP
0.997
More...
Q2TAZ0
Autophagy-related protein 2 homolog A
DEG_SPOP_SBC_1
742:746
PQSSS
SPOP
0.9683
More...
Q5TCM9
Late cornified envelope protein 5A
DEG_SPOP_SBC_1
82:86
PQSSS
SPOP
0.798
More...
Q6UY09
Carcinoembryonic antigen-related cell adhesion molecule 20
DEG_SPOP_SBC_1
438:442
PQSSS
SPOP
0.8914
More...
Q8IVL0
Neuron navigator 3
DEG_SPOP_SBC_1
299:303
PQSSS
SPOP
0.8349
More...
Q8NCP5
Zinc finger and BTB domain-containing protein 44
DEG_SPOP_SBC_1
334:338
PQSSS
SPOP
0.902
More...
Q8NFU7
Methylcytosine dioxygenase TET1
DEG_SPOP_SBC_1
477:481
PQSSS
SPOP
0.9239
More...
Q8NHY3
GAS2-like protein 2
DEG_SPOP_SBC_1
384:388
PQSSS
SPOP
0.9783
More...
Q8TDM6
Disks large homolog 5
DEG_SPOP_SBC_1
797:801
PQSSS
SPOP
0.9776
More...
Q8WXI9
Transcriptional repressor p66-beta
DEG_SPOP_SBC_1
300:304
PQSSS
SPOP
0.9946
More...
Q8WYB5
Histone acetyltransferase KAT6B
DEG_SPOP_SBC_1
519:523
PQSSS
SPOP
0.9325
More...
Q9BSD3
RAD9, HUS1, RAD1-interacting nuclear orphan protein 1
DEG_SPOP_SBC_1
99:103
PQSSS
SPOP
0.9292
More...
Q9BWV1
Brother of CDO
DEG_SPOP_SBC_1
592:596
PQSSS
SPOP
0.7123
More...
Q9H5V7
Zinc finger protein Pegasus
DEG_SPOP_SBC_1
305:309
PQSSS
SPOP
0.6593
More...
Q9NSC2
Sal-like protein 1
DEG_SPOP_SBC_1
322:326
PQSSS
SPOP
0.9692
More...
Q9ULI3
Protein HEG homolog 1
DEG_SPOP_SBC_1
739:743
PQSSS
SPOP
0.9901
More...
Q9UNW9
RNA-binding protein Nova-2
DEG_SPOP_SBC_1
204:208
PQSSS
SPOP
0.9633
More...
Q9UQ35
Serine/arginine repetitive matrix protein 2
DEG_SPOP_SBC_1
413:417
PQSSS
SPOP
0.9895
More...
E9PAV3
Nascent polypeptide-associated complex subunit alpha, muscle-specific form
DEG_SPOP_SBC_1
83:87
PQSSS
SPOP
0.8965
More...
Q5T8P6
RNA-binding protein 26
DEG_SPOP_SBC_1
129:133
PQSSS
SPOP
0.9781
More...
F5H4B4
Protein FAM227A
DEG_SPOP_SBC_1
345:349
PQSSS
SPOP
0.9381
More...
P0CB48
Putative upstream-binding factor 1-like protein 6
DEG_SPOP_SBC_1
332:336
PQSSS
SPOP
0.5892
More...