DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PQSSS
Uniprot ID:
Q8IVL0
Source protein:
Neuron navigator 3
Source gene:
NAV3
Class:
DEG_SPOP_SBC_1
Location:
299:303
E3 ligase:
SPOP
DEGRON score:
0.8349
ASA_SCORE:
98.68
COIL:
0.9552
CONS_SCORE:
0.327
DSS_SCORE:
0.805
HELIX:
0.032
FCONS_SCORE:
0.9597
RIG_SCORE:
0.4925
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Q300P
TCGA-22-0940
LUSC
TCGA
PQSSS
DEG_SPOP_SBC_1
0.5924
p.Q300P
DO26794
LUSC
ICGC
PQSSS
DEG_SPOP_SBC_1
0.5924
p.G298V
TCGA-22-5485
LUSC
TCGA
PQSSS
DEG_SPOP_SBC_1
0.3056
p.G298V
DO26553
LUSC
ICGC
PQSSS
DEG_SPOP_SBC_1
0.3056
p.S313R
TCGA-43-A474
LUSC
TCGA
PQSSS
DEG_SPOP_SBC_1
0.0556
p.S313R
DO45490
LUSC
ICGC
PQSSS
DEG_SPOP_SBC_1
0.0556
p.E292K
TCGA-D3-A8GQ
SKCM
TCGA
PQSSS
DEG_SPOP_SBC_1
0.1389
p.E292K
TCGA-QQ-A8VG
SARC
TCGA
PQSSS
DEG_SPOP_SBC_1
0.1389
p.E292K
DO220260
SARC
ICGC
PQSSS
DEG_SPOP_SBC_1
0.1389
p.E292K
DO51246
SKCM
ICGC
PQSSS
DEG_SPOP_SBC_1
0.1389
p.S301L
TCGA-DA-A1HY
SKCM
TCGA
PQSSS
DEG_SPOP_SBC_1
0.7667
p.S301L
DO222699
MELA
ICGC
PQSSS
DEG_SPOP_SBC_1
0.7667
p.S301L
DO229494
SKCA
ICGC
PQSSS
DEG_SPOP_SBC_1
0.7667
p.S301L
DO37409
SKCM
ICGC
PQSSS
DEG_SPOP_SBC_1
0.7667
p.S295Y
TCGA-H7-A6C5
HNSC
TCGA
PQSSS
DEG_SPOP_SBC_1
0.2222
p.S295Y
DO49996
HNSC
ICGC
PQSSS
DEG_SPOP_SBC_1
0.2222
p.P312H
TCGA-L9-A7SV
LUAD
TCGA
PQSSS
DEG_SPOP_SBC_1
0.0833
p.P312H
DO49875
LUAD
ICGC
PQSSS
DEG_SPOP_SBC_1
0.0833
p.G304D
DO224563
LUSC
ICGC
PQSSS
DEG_SPOP_SBC_1
0.3056
p.P311T
DO231106
LUSC
ICGC
PQSSS
DEG_SPOP_SBC_1
0.1111
p.G290E
DO229272
THCA
ICGC
PQSSS
DEG_SPOP_SBC_1
0.0833
p.G290E
DO229213
THCA
ICGC
PQSSS
DEG_SPOP_SBC_1
0.0833
p.P299L
SIDM00660
Colorectal Carcinoma
GDSC
PQSSS
DEG_SPOP_SBC_1
0.7582
p.P299L
ACH-000985
Colon/Colorectal Cancer
CCLE
PQSSS
DEG_SPOP_SBC_1
0.7582
p.P299L
LS-411N
large_intestine
COSMIC
PQSSS
DEG_SPOP_SBC_1
0.7582
p.M296I
HCT-15
large_intestine
COSMIC
PQSSS
DEG_SPOP_SBC_1
0.25
Drug responses associated with NAV3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PQSSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15027
Protein transport protein Sec16A
DEG_SPOP_SBC_1
1117:1121
PQSSS
SPOP
0.9855
More...
O60271
C-Jun-amino-terminal kinase-interacting protein 4
DEG_SPOP_SBC_1
1239:1243
PQSSS
SPOP
0.9213
More...
O95409
Zinc finger protein ZIC 2
DEG_SPOP_SBC_1
447:451
PQSSS
SPOP
0.931
More...
O95835
Serine/threonine-protein kinase LATS1
DEG_SPOP_SBC_1
434:438
PQSSS
SPOP
0.9911
More...
O96013
Serine/threonine-protein kinase PAK 4
DEG_SPOP_SBC_1
240:244
PQSSS
SPOP
0.6645
More...
P0CB47
Upstream-binding factor 1-like protein 1
DEG_SPOP_SBC_1
325:329
PQSSS
SPOP
0.8335
More...
P15884
Transcription factor 4
DEG_SPOP_SBC_1
249:253
PQSSS
SPOP
0.9306
More...
P22004
Bone morphogenetic protein 6
DEG_SPOP_SBC_1
60:64
PQSSS
SPOP
0.674
More...
P31629
Transcription factor HIVEP2
DEG_SPOP_SBC_1
1582:1586
PQSSS
SPOP
0.989
More...
P49023
Paxillin
DEG_SPOP_SBC_1
81:85
PQSSS
SPOP
0.9894
More...
Q02930
Cyclic AMP-responsive element-binding protein 5
DEG_SPOP_SBC_1
138:142
PQSSS
SPOP
0.9993
More...
Q15147
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4
DEG_SPOP_SBC_1
887:891
PQSSS
SPOP
0.997
More...
Q2TAZ0
Autophagy-related protein 2 homolog A
DEG_SPOP_SBC_1
742:746
PQSSS
SPOP
0.9683
More...
Q5TCM9
Late cornified envelope protein 5A
DEG_SPOP_SBC_1
82:86
PQSSS
SPOP
0.798
More...
Q6UY09
Carcinoembryonic antigen-related cell adhesion molecule 20
DEG_SPOP_SBC_1
438:442
PQSSS
SPOP
0.8914
More...
Q8IVL0
Neuron navigator 3
DEG_SPOP_SBC_1
299:303
PQSSS
SPOP
0.8349
More...
Q8NCP5
Zinc finger and BTB domain-containing protein 44
DEG_SPOP_SBC_1
334:338
PQSSS
SPOP
0.902
More...
Q8NFU7
Methylcytosine dioxygenase TET1
DEG_SPOP_SBC_1
477:481
PQSSS
SPOP
0.9239
More...
Q8NHY3
GAS2-like protein 2
DEG_SPOP_SBC_1
384:388
PQSSS
SPOP
0.9783
More...
Q8TDM6
Disks large homolog 5
DEG_SPOP_SBC_1
797:801
PQSSS
SPOP
0.9776
More...
Q8WXI9
Transcriptional repressor p66-beta
DEG_SPOP_SBC_1
300:304
PQSSS
SPOP
0.9946
More...
Q8WYB5
Histone acetyltransferase KAT6B
DEG_SPOP_SBC_1
519:523
PQSSS
SPOP
0.9325
More...
Q9BSD3
RAD9, HUS1, RAD1-interacting nuclear orphan protein 1
DEG_SPOP_SBC_1
99:103
PQSSS
SPOP
0.9292
More...
Q9BWV1
Brother of CDO
DEG_SPOP_SBC_1
592:596
PQSSS
SPOP
0.7123
More...
Q9H5V7
Zinc finger protein Pegasus
DEG_SPOP_SBC_1
305:309
PQSSS
SPOP
0.6593
More...
Q9NSC2
Sal-like protein 1
DEG_SPOP_SBC_1
322:326
PQSSS
SPOP
0.9692
More...
Q9ULI3
Protein HEG homolog 1
DEG_SPOP_SBC_1
739:743
PQSSS
SPOP
0.9901
More...
Q9UNW9
RNA-binding protein Nova-2
DEG_SPOP_SBC_1
204:208
PQSSS
SPOP
0.9633
More...
Q9UQ35
Serine/arginine repetitive matrix protein 2
DEG_SPOP_SBC_1
413:417
PQSSS
SPOP
0.9895
More...
E9PAV3
Nascent polypeptide-associated complex subunit alpha, muscle-specific form
DEG_SPOP_SBC_1
83:87
PQSSS
SPOP
0.8965
More...
Q5T8P6
RNA-binding protein 26
DEG_SPOP_SBC_1
129:133
PQSSS
SPOP
0.9781
More...
F5H4B4
Protein FAM227A
DEG_SPOP_SBC_1
345:349
PQSSS
SPOP
0.9381
More...
P0CB48
Putative upstream-binding factor 1-like protein 6
DEG_SPOP_SBC_1
332:336
PQSSS
SPOP
0.5892
More...