DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PSSTS
Uniprot ID:
Q9NZ52
Source protein:
ADP-ribosylation factor-binding protein GGA3
Source gene:
GGA3
Class:
DEG_SPOP_SBC_1
Location:
380:384
E3 ligase:
SPOP
DEGRON score:
0.9419
ASA_SCORE:
75.46
COIL:
0.8818
CONS_SCORE:
0.2506
DSS_SCORE:
0.5486
HELIX:
0.0906
FCONS_SCORE:
0.8041
RIG_SCORE:
0.5969
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S371C
TCGA-Q1-A73O
CESC
TCGA
PSSTS
DEG_SPOP_SBC_1
0.0833
p.A379T
DO230311
COCA
ICGC
PSSTS
DEG_SPOP_SBC_1
0.3056
p.N381K
DO229036
LICA
ICGC
PSSTS
DEG_SPOP_SBC_1
0.6918
p.G380V
DO37679
SKCM
ICGC
PSSTS
DEG_SPOP_SBC_1
0.7532
p.V373A
DO229218
THCA
ICGC
PSSTS
DEG_SPOP_SBC_1
0.1389
p.A379V
DO229211
THCA
ICGC
PSSTS
DEG_SPOP_SBC_1
0.3056
p.S371P
SIDM00396
Acute Myeloid Leukemia
GDSC
PSSTS
DEG_SPOP_SBC_1
0.0833
p.S371P
SIG-M5
haematopoietic_and_lymphoid_tissue
COSMIC
PSSTS
DEG_SPOP_SBC_1
0.0833
p.S371A
SIDM00404
B-Cell Non-Hodgkin's Lymphoma
GDSC
PSSTS
DEG_SPOP_SBC_1
0.0833
p.S371A
SU-DHL-16
haematopoietic_and_lymphoid_tissue
COSMIC
PSSTS
DEG_SPOP_SBC_1
0.0833
p.A377T
KP-N-YS
autonomic_ganglia
COSMIC
PSSTS
DEG_SPOP_SBC_1
0.25
Drug responses associated with GGA3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PSSTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O43426
Synaptojanin-1
DEG_SPOP_SBC_1
991:995
PSSTS
SPOP
0.8023
More...
O75563
Src kinase-associated phosphoprotein 2
DEG_SPOP_SBC_1
4:8
PSSTS
SPOP
0.9465
More...
O95677
Eyes absent homolog 4
DEG_SPOP_SBC_1
304:308
PSSTS
SPOP
0.9788
More...
P13284
Gamma-interferon-inducible lysosomal thiol reductase
DEG_SPOP_SBC_1
238:242
PSSTS
SPOP
0.8439
More...
P23468
Receptor-type tyrosine-protein phosphatase delta
DEG_SPOP_SBC_1
621:625
PSSTS
SPOP
0.9072
More...
P35227
Polycomb group RING finger protein 2
DEG_SPOP_SBC_1
324:328
PSSTS
SPOP
0.9906
More...
P38398
Breast cancer type 1 susceptibility protein
DEG_SPOP_SBC_1
1594:1598
PSSTS
SPOP
0.9808
More...
Q02505
Mucin-3A
DEG_SPOP_SBC_1
2288:2292
PSSTS
SPOP
0.8032
More...
Q03468
DNA excision repair protein ERCC-6
DEG_SPOP_SBC_1
1344:1348
PSSTS
SPOP
0.9734
More...
Q13111
Chromatin assembly factor 1 subunit A
DEG_SPOP_SBC_1
290:294
PSSTS
SPOP
0.8679
More...
Q2M1Z3
Rho GTPase-activating protein 31
DEG_SPOP_SBC_1
1236:1240
PSSTS
SPOP
0.7216
More...
Q53GS7
mRNA export factor GLE1
DEG_SPOP_SBC_1
71:75
PSSTS
SPOP
0.962
More...
Q5SXH7
Pleckstrin homology domain-containing family S member 1
DEG_SPOP_SBC_1
159:163
PSSTS
SPOP
0.9843
More...
Q5T7W7
Thiosulfate sulfurtransferase/rhodanese-like domain-containing protein 2
DEG_SPOP_SBC_1
2:6
PSSTS
SPOP
0.938
More...
Q5VT06
Centrosome-associated protein 350
DEG_SPOP_SBC_1
259:263
PSSTS
SPOP
0.9983
More...
Q5VU43
Myomegalin
DEG_SPOP_SBC_1
1658:1662
PSSTS
SPOP
0.9862
More...
Q7Z5N4
Protein sidekick-1
DEG_SPOP_SBC_1
618:622
PSSTS
SPOP
0.8473
More...
Q86YZ3
Hornerin
DEG_SPOP_SBC_1
2832:2836
PSSTS
SPOP
0.9572
More...
Q8IZA3
Histone H1.8
DEG_SPOP_SBC_1
12:16
PSSTS
SPOP
0.9853
More...
Q8IZQ1
WD repeat and FYVE domain-containing protein 3
DEG_SPOP_SBC_1
3304:3308
PSSTS
SPOP
0.9875
More...
Q8N3K9
Cardiomyopathy-associated protein 5
DEG_SPOP_SBC_1
895:899
PSSTS
SPOP
0.9869
More...
Q8N554
Zinc finger protein 276
DEG_SPOP_SBC_1
344:348
PSSTS
SPOP
0.8492
More...
Q8N6C5
Immunoglobulin superfamily member 1
DEG_SPOP_SBC_1
1321:1325
PSSTS
SPOP
0.9927
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
2724:2728
PSSTS
SPOP
0.8319
More...
Q96HA7
Tonsoku-like protein
DEG_SPOP_SBC_1
859:863
PSSTS
SPOP
0.9959
More...
Q99102
Mucin-4
DEG_SPOP_SBC_1
2134:2138
PSSTS
SPOP
0.9955
More...
Q99700
Ataxin-2
DEG_SPOP_SBC_1
808:812
PSSTS
SPOP
0.9968
More...
Q9BUF7
Protein crumbs homolog 3
DEG_SPOP_SBC_1
41:45
PSSTS
SPOP
0.5098
More...
Q9NXR1
Nuclear distribution protein nudE homolog 1
DEG_SPOP_SBC_1
305:309
PSSTS
SPOP
0.9986
More...
Q9NZ52
ADP-ribosylation factor-binding protein GGA3
DEG_SPOP_SBC_1
380:384
PSSTS
SPOP
0.9419
More...
Q9NZP6
Nuclear pore-associated protein 1
DEG_SPOP_SBC_1
1029:1033
PSSTS
SPOP
0.9878
More...
Q9ULJ8
Neurabin-1
DEG_SPOP_SBC_1
929:933
PSSTS
SPOP
0.988
More...
Q9Y4X4
Krueppel-like factor 12
DEG_SPOP_SBC_1
110:114
PSSTS
SPOP
0.9898
More...
Q6EKJ0
General transcription factor II-I repeat domain-containing protein 2B
DEG_SPOP_SBC_1
253:257
PSSTS
SPOP
0.9881
More...
Q86UP8
General transcription factor II-I repeat domain-containing protein 2A
DEG_SPOP_SBC_1
253:257
PSSTS
SPOP
0.9876
More...
Q9P1W3
Calcium permeable stress-gated cation channel 1
DEG_SPOP_SBC_1
730:734
PSSTS
SPOP
0.8171
More...
O60732
Melanoma-associated antigen C1
DEG_SPOP_SBC_1
818:822
PSSTS
SPOP
0.974
More...
O60732
Melanoma-associated antigen C1
DEG_SPOP_SBC_1
835:839
PSSTS
SPOP
0.9702
More...
Q96MY1
Nucleolar protein 4-like
DEG_SPOP_SBC_1
385:389
PSSTS
SPOP
0.7821
More...
Q9BQN1
Protein FAM83C
DEG_SPOP_SBC_1
343:347
PSSTS
SPOP
0.9983
More...
Q5HYC2
Uncharacterized protein KIAA2026
DEG_SPOP_SBC_1
2031:2035
PSSTS
SPOP
0.7612
More...