DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
PTSSS
Uniprot ID:
Q8WWN8
Source protein:
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 3
Source gene:
ARAP3
Class:
DEG_SPOP_SBC_1
Location:
139:143
E3 ligase:
SPOP
DEGRON score:
0.948
ASA_SCORE:
80.6
COIL:
0.8786
CONS_SCORE:
0.3603
DSS_SCORE:
0.7708
HELIX:
0.105
FCONS_SCORE:
0.9602
RIG_SCORE:
0.545
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S141F
TCGA-05-4382
LUAD
TCGA
PTSSS
DEG_SPOP_SBC_1
0.7982
p.S141F
DO24900
LUAD
ICGC
PTSSS
DEG_SPOP_SBC_1
0.7982
p.P129A
TCGA-B6-A0X1
BRCA
TCGA
PTSSS
DEG_SPOP_SBC_1
0.0556
p.P129A
DO4854
BRCA
ICGC
PTSSS
DEG_SPOP_SBC_1
0.0556
p.P136S
TCGA-EE-A3AA
SKCM
TCGA
PTSSS
DEG_SPOP_SBC_1
0.25
p.P136S
DO222632
MELA
ICGC
PTSSS
DEG_SPOP_SBC_1
0.25
p.P136S
DO37571
SKCM
ICGC
PTSSS
DEG_SPOP_SBC_1
0.25
p.P136L
DO218269
BRCA
ICGC
PTSSS
DEG_SPOP_SBC_1
0.25
p.E152K
DO233249
GACA
ICGC
PTSSS
DEG_SPOP_SBC_1
0.0833
p.R133Q
DO233267
GACA
ICGC
PTSSS
DEG_SPOP_SBC_1
0.1667
p.P135H
DO229018
LICA
ICGC
PTSSS
DEG_SPOP_SBC_1
0.2222
p.W136C
DO23574
LUAD
ICGC
PTSSS
DEG_SPOP_SBC_1
0.25
p.G130V
DO51965
PRAD
ICGC
PTSSS
DEG_SPOP_SBC_1
0.0833
p.P137H
SIDM00660
Colorectal Carcinoma
GDSC
PTSSS
DEG_SPOP_SBC_1
0.2778
p.P137H
LS-411N
large_intestine
COSMIC
PTSSS
DEG_SPOP_SBC_1
0.2778
p.R142K
ACH-000874
Leukemia
CCLE
PTSSS
DEG_SPOP_SBC_1
0.7237
p.R142K
RS4-11
haematopoietic_and_lymphoid_tissue
COSMIC
PTSSS
DEG_SPOP_SBC_1
0.7237
p.V133L
ACH-000900
Lung Cancer
CCLE
PTSSS
DEG_SPOP_SBC_1
0.1667
p.V133L
NCI-H23
lung
COSMIC
PTSSS
DEG_SPOP_SBC_1
0.1667
p.E146K
A3-KAW
haematopoietic_and_lymphoid_tissue
COSMIC
PTSSS
DEG_SPOP_SBC_1
0.25
p.W136R
JHH-1
liver
COSMIC
PTSSS
DEG_SPOP_SBC_1
0.25
Drug responses associated with ARAP3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PTSSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A0AVK6
Transcription factor E2F8
DEG_SPOP_SBC_1
833:837
PTSSS
SPOP
0.988
More...
O14795
Protein unc-13 homolog B
DEG_SPOP_SBC_1
255:259
PTSSS
SPOP
0.9982
More...
O15353
Forkhead box protein N1
DEG_SPOP_SBC_1
566:570
PTSSS
SPOP
0.9933
More...
O95271
Poly [ADP-ribose] polymerase tankyrase-1
DEG_SPOP_SBC_1
135:139
PTSSS
SPOP
0.9984
More...
P08651
Nuclear factor 1 C-type
DEG_SPOP_SBC_1
306:310
PTSSS
SPOP
0.9982
More...
P50402
Emerin
DEG_SPOP_SBC_1
183:187
PTSSS
SPOP
0.9908
More...
Q00722
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-2
DEG_SPOP_SBC_1
470:474
PTSSS
SPOP
0.9605
More...
Q02446
Transcription factor Sp4
DEG_SPOP_SBC_1
183:187
PTSSS
SPOP
0.896
More...
Q02505
Mucin-3A
DEG_SPOP_SBC_1
1874:1878
PTSSS
SPOP
0.8129
More...
Q05823
2-5A-dependent ribonuclease
DEG_SPOP_SBC_1
13:17
PTSSS
SPOP
0.9874
More...
Q10571
Transcriptional activator MN1
DEG_SPOP_SBC_1
1138:1142
PTSSS
SPOP
0.9495
More...
Q12955
Ankyrin-3
DEG_SPOP_SBC_1
2626:2630
PTSSS
SPOP
0.9845
More...
Q15911
Zinc finger homeobox protein 3
DEG_SPOP_SBC_1
2377:2381
PTSSS
SPOP
0.9821
More...
Q2QGD7
Zinc finger protein ZXDC
DEG_SPOP_SBC_1
640:644
PTSSS
SPOP
0.9976
More...
Q4VCS5
Angiomotin
DEG_SPOP_SBC_1
211:215
PTSSS
SPOP
0.9988
More...
Q5SW79
Centrosomal protein of 170 kDa
DEG_SPOP_SBC_1
1276:1280
PTSSS
SPOP
0.9503
More...
Q5VT52
Regulation of nuclear pre-mRNA domain-containing protein 2
DEG_SPOP_SBC_1
742:746
PTSSS
SPOP
0.9157
More...
Q5VUA4
Zinc finger protein 318
DEG_SPOP_SBC_1
1268:1272
PTSSS
SPOP
0.9958
More...
Q6NTF9
Rhomboid domain-containing protein 2
DEG_SPOP_SBC_1
314:318
PTSSS
SPOP
0.9747
More...
Q7Z417
Nuclear fragile X mental retardation-interacting protein 2
DEG_SPOP_SBC_1
377:381
PTSSS
SPOP
0.9915
More...
Q86YN6
Peroxisome proliferator-activated receptor gamma coactivator 1-beta
DEG_SPOP_SBC_1
166:170
PTSSS
SPOP
0.9809
More...
Q8IWN7
Retinitis pigmentosa 1-like 1 protein
DEG_SPOP_SBC_1
1195:1199
PTSSS
SPOP
0.9915
More...
Q8WUH2
Transforming growth factor-beta receptor-associated protein 1
DEG_SPOP_SBC_1
392:396
PTSSS
SPOP
0.6471
More...
Q8WWN8
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 3
DEG_SPOP_SBC_1
139:143
PTSSS
SPOP
0.948
More...
Q8WYL5
Protein phosphatase Slingshot homolog 1
DEG_SPOP_SBC_1
923:927
PTSSS
SPOP
0.9994
More...
Q92934
Bcl2-associated agonist of cell death
DEG_SPOP_SBC_1
55:59
PTSSS
SPOP
0.7818
More...
Q9BUH8
Brain-enriched guanylate kinase-associated protein
DEG_SPOP_SBC_1
295:299
PTSSS
SPOP
0.9553
More...
Q9C0A1
Zinc finger homeobox protein 2
DEG_SPOP_SBC_1
2319:2323
PTSSS
SPOP
0.9971
More...
Q9NYQ7
Cadherin EGF LAG seven-pass G-type receptor 3
DEG_SPOP_SBC_1
2379:2383
PTSSS
SPOP
0.9083
More...
Q9UIF8
Bromodomain adjacent to zinc finger domain protein 2B
DEG_SPOP_SBC_1
17:21
PTSSS
SPOP
0.8669
More...
Q9Y5N1
Histamine H3 receptor
DEG_SPOP_SBC_1
303:307
PTSSS
SPOP
0.9912
More...
Q9H195
Mucin-3B
DEG_SPOP_SBC_1
657:661
PTSSS
SPOP
0.9681
More...