Search results: The pahtway p1964 has 100 genes in the original annotation. Currently, there are 75 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group ? Functional group ?
2147F2PT | RPRGL2 | THPH1coagulation factor II, thrombin11p11CV:PGCnp
GO_Annotation
PMID:cooccur
9409PEX16PBD8A | PBD8Bperoxisomal biogenesis factor 1611p11.2CV:PGCnp
6688SPI1OF | PU.1 | SFPI1 | SPI-1 | SPI-ASpi-1 proto-oncogene11p11.2CV:GWASdb
CV:PGCnp
DMG:vanEijk_2014
GO_Annotation
10062NR1H3LXR-a | LXRA | RLD-1nuclear receptor subfamily 1 group H member 311p11.2CV:PGCnp
DMG:Jaffe_2016
9479MAPK8IP1IB1 | JIP-1 | JIP1 | PRKM8IPmitogen-activated protein kinase 8 interacting protein 111p11.2CV:PGCnp
DMG:Nishioka_2013
Network
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.humanNRC
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
5795PTPRJCD148 | DEP1 | HPTPeta | R-PTP-ETA | SCC1protein tyrosine phosphatase, receptor type J11p11.2CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
Network
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
1643DDB2DDBB | UV-DDB2 | XPEdamage specific DNA binding protein 211p11.2CV:PGCnp
9793CKAP5CHTOG | MSPS | TOG | TOGp | ch-TOGcytoskeleton associated protein 511p11.2CV:PGCnp
CV:PheWAS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
29763PACSIN3SDPIIIprotein kinase C and casein kinase substrate in neurons 311p11.2CV:PGCnpG2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
57586SYT13-synaptotagmin 1311p11.2CV:PGCnp
392ARHGAP1CDC42GAP | RHOGAP | RHOGAP1 | p50rhoGAPRho GTPase activating protein 111p11.2CV:PGCnpINTRACELLULAR TRAFFICKING
8525DGKZDAGK5 | DAGK6 | DGK-ZETA | hDGKzetadiacylglycerol kinase zeta11p11.2CV:PGC128
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
51317PHF21ABHC80 | BM-006PHD finger protein 21A11p11.2CV:PGCnp
PMID:cooccur
8534CHST1C6ST | GST-1 | KS6ST | KSGal6ST | KSSTcarbohydrate sulfotransferase 111p11.2CV:PGCnp
4192MDKARAP | MK | NEGF2midkine (neurite growth-promoting factor 2)11p11.2CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
2346FOLH1FGCP | FOLH | GCP2 | GCPII | NAALAD1 | NAALAdase | PSM | PSMA | mGCPfolate hydrolase (prostate-specific membrane antigen) 111p11.2CV:PGCnp
PMID:cooccur
4607MYBPC3CMD1MM | CMH4 | FHC | LVNC10 | MYBP-Cmyosin binding protein C, cardiac11p11.2CV:PGCnp
8567MADDDENN | IG20 | RAB3GEPMAP kinase activating death domain11p11.2CV:PGCnp
PMID:cooccur
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
1408CRY2HCRY2 | PHLL2cryptochrome circadian clock 211p11.2CV:PGCnp
PMID:cooccur
55343SLC35C1CDG2C | FUCT1solute carrier family 35 member C111p11.2CV:PGCnp
DMG:Jaffe_2016
90993CREB3L1OASIScAMP responsive element binding protein 3-like 111p11.2CV:PGC128
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
79797ZNF408EVR6 | RP72zinc finger protein 40811p11.2CV:PGCnp
Expression
Network
4038LRP4CLSS | CMS17 | LRP-4 | LRP10 | MEGF7 | SOST2LDL receptor related protein 411p11.2CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
GO_Annotation
PMID:cooccur
CompositeSet
Ascano FMRP targets
5702PSMC3TBP1proteasome 26S subunit, ATPase 311p11.2CV:PGCnp
DMG:Jaffe_2016
Network
G2Cdb.humanPSD
G2Cdb.humanPSP
53ACP2LAPacid phosphatase 2, lysosomal11p11.2|11p12-p11CV:PGCnp
PMID:cooccur
Ascano FMRP targets
1132CHRM4HM4 | M4Rcholinergic receptor muscarinic 411p12-p11.2ADT:Sun_2012
CV:PGCnp
GO_Annotation
PMID:cooccur
50614GALNT9GALNAC-T9 | GALNACT9polypeptide N-acetylgalactosaminyltransferase 912q24.33CV:PGCnp
DMG:Wockner_2014
11061LECT1BRICD3 | CHM-I | CHM1 | MYETS1leukocyte cell derived chemotaxin 113q14.3CV:PGCnp
10910SUGT1SGT1SGT1 homolog, MIS12 kinetochore complex assembly cochaperone13q14.3CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
284383OR2Z1OR19-4 | OR2Z2olfactory receptor family 2 subfamily Z member 119p13.2CV:PGCnp
10452TOMM40C19orf1 | D19S1177E | PER-EC1 | PEREC1 | TOM40translocase of outer mitochondrial membrane 4019q13PMID:cooccur
147700KLC3KLC2 | KLC2L | KLCt | KNS2Bkinesin light chain 319q13CV:PGCnp
DMG:Wockner_2014
23094SIPA1L3CTRCT45 | SPAL3 | SPAR3signal-induced proliferation-associated 1 like 319q13.13CV:PGCnp
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
344APOC2APO-CII | APOC-IIapolipoprotein C-II19q13.2CV:PGCnp
348APOEAD2 | APO-E | LDLCQ5 | LPGapolipoprotein E19q13.2Association
Core
GO_Annotation
GR_COR
GR_Ng
GR_WM
Network
PMID:cooccur
CELL METABOLISM
CompositeSet
Darnell FMRP targets
8193DPF1BAF45b | NEUD4 | neuro-d4double PHD fingers 119q13.2CV:PGCnp
DMG:Nishioka_2013
4059BCAMAU | CD239 | LU | MSK19basal cell adhesion molecule (Lutheran blood group)19q13.2DMG:Wockner_2014
2068ERCC2COFS2 | EM9 | TFIIH | TTD | TTD1 | XPDexcision repair cross-complementation group 219q13.3DMG:Jaffe_2016
11129CLASRPCLASP | SFRS16 | SWAP2CLK4-associating serine/arginine rich protein19q13.3CV:PGCnp
57787MARK4MARK4L | MARK4S | MARKL1 | MARKL1L | PAR-1Dmicrotubule affinity regulating kinase 419q13.3CV:PGCnp
DMG:Montano_2016
DNM:Fromer_2014
GO_Annotation
PMID:cooccur
CompositeSet
1209CLPTM1-cleft lip and palate associated transmembrane protein 119q13.3CV:PGCnp
DMG:Wockner_2014
90332EXOC3L2XTP7exocyst complex component 3-like 219q13.32CV:PGCnp
DMG:Wockner_2014
2354FOSBAP-1 | G0S3 | GOS3 | GOSBFBJ murine osteosarcoma viral oncogene homolog B19q13.32CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
2067ERCC1COFS4 | RAD10 | UV20excision repair cross-complementation group 119q13.32DMG:Jaffe_2016
10848PPP1R13LIASPP | NKIP1 | RAI | RAI4protein phosphatase 1 regulatory subunit 13 like19q13.32CV:PGCnp
DMG:Wockner_2014
5971RELBI-REL | IREL | REL-Bv-rel avian reticuloendotheliosis viral oncogene homolog B19q13.32CV:PGCnp
GO_Annotation
Network
7593MZF1MZF-1 | MZF1B | ZFP98 | ZNF42 | ZSCAN6myeloid zinc finger 119q13.4CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
7691ZNF132pHZ-12zinc finger protein 13219q13.4CV:PGCnp
10155TRIM28KAP1 | PPP1R157 | RNF96 | TF1B | TIF1Btripartite motif containing 2819q13.4CV:PGCnpAscano FMRP targets
201514ZNF584-zinc finger protein 58419q13.43CV:PGCnp
84878ZBTB45ZNF499zinc finger and BTB domain containing 4519q13.43CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
CompositeSet
10998SLC27A5ACSB | ACSVL6 | BACS | BAL | FACVL3 | FATP-5 | FATP5 | VLACSR | VLCS-H2 | VLCSH2solute carrier family 27 member 519q13.43CV:PGCnp
25799ZNF324ZF5128 | ZNF324Azinc finger protein 32419q13.43CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
9040UBE2MUBC-RS2 | UBC12 | hUbc12ubiquitin conjugating enzyme E2 M19q13.43CV:PGCnp
DMG:Wockner_2014
11227GALNT5GALNAC-T5 | GALNACT5polypeptide N-acetylgalactosaminyltransferase 52q24.1CV:PGCnp
DMG:Wockner_2014
GSMA_IIA
1894ECT2ARHGEF31epithelial cell transforming 23q26.1-q26.2CV:PGCnp
22871NLGN1NL1neuroligin 13q26.31CV:GWASdb
CV:PGCnp
CV:PheWAS
GO_Annotation
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
G2Cdb.humanPSD
G2Cdb.humanPSP
Potential synaptic genes
23657SLC7A11CCBR1 | xCTsolute carrier family 7 member 114q28.3CV:GWASdb
CV:PGCnp
DNM:McCarthy_2014
GO_Annotation
PMID:cooccur
54510PCDH18PCDH68Lprotocadherin 184q31CV:PGCnp
Expression
GO_Annotation
PMID:cooccur
51809GALNT7GALNAC-T7 | GalNAcT7polypeptide N-acetylgalactosaminyltransferase 74q31.1CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
55568GALNT10GALNACT10 | PPGALNACT10 | PPGANTASE10polypeptide N-acetylgalactosaminyltransferase 105q33.2CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
Ascano FMRP targets
9844ELMO1CED-12 | CED12 | ELMO-1engulfment and cell motility 17p14.1CV:PGCnp
DEG:Maycox_2009
196AHRbHLHe76aryl hydrocarbon receptor7p15CV:PGCnp
PMID:cooccur
27075TSPAN13NET-6 | NET6 | TM4SF13tetraspanin 137p21.1CV:PGCnp
DMG:Jaffe_2016
5649RELNETL7 | LIS2 | PRO1598 | RLreelin7q22Association
Core
CV:GWAScat
CV:GWASdb
CV:PGCnp
DNM:Fromer_2014
GO_Annotation
GR_Ng
GR_WM
Network
PMID:cooccur
CompositeSet
Darnell FMRP targets
375611SLC26A5DFNB61 | PRESsolute carrier family 26 member 57q22.1CV:PGCnp
DMG:Jaffe_2016
5001ORC5ORC5L | ORC5P | ORC5T | PPP1R117origin recognition complex subunit 57q22.1CV:PGCnp
10135NAMPT1110035O14Rik | PBEF | PBEF1 | VF | VISFATINnicotinamide phosphoribosyltransferase7q22.3CV:GWASdb
CV:PGCnp
9162DGKIDGK-IOTAdiacylglycerol kinase iota7q32.3-q33CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
6604SMARCD3BAF60C | CRACD3 | Rsc6pSWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 37q35-q36CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
Chromatin Remodeling Genes
51667NUB1BS4 | NUB1L | NYREN18negative regulator of ubiquitin-like proteins 17q36CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
Expression
5799PTPRN2IA-2beta | IAR | ICAAR | PTPRP | R-PTP-N2protein tyrosine phosphatase, receptor type N27q36CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
TYROSINE KINASE SIGNALING
CompositeSet
Darnell FMRP targets
6009RHEBRHEB2Ras homolog enriched in brain7q36CV:PGCnp
DMG:Wockner_2014
51422PRKAG2AAKG | AAKG2 | CMH6 | H91620p | WPWSprotein kinase AMP-activated non-catalytic subunit gamma 27q36.1CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
7434VIPR2C16DUPq36.3 | DUP7q36.3 | PACAP-R-3 | PACAP-R3 | VIP-R-2 | VPAC2 | VPAC2R | VPCAP2Rvasoactive intestinal peptide receptor 27q36.3CNV:YES
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur