DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
APSTS
Uniprot ID:
Q96EP1
Source protein:
E3 ubiquitin-protein ligase CHFR
Source gene:
CHFR
Class:
DEG_SPOP_SBC_1
Location:
460:464
E3 ligase:
SPOP
DEGRON score:
0.8719
ASA_SCORE:
57.88
COIL:
0.793
CONS_SCORE:
0.3854
DSS_SCORE:
0.5206
HELIX:
0.0856
FCONS_SCORE:
1.0465
RIG_SCORE:
0.6496
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T468M
TCGA-D1-A17D
UCEC
TCGA
APSTS
DEG_SPOP_SBC_1
0.2222
p.T468M
DO232761
PBCA
ICGC
APSTS
DEG_SPOP_SBC_1
0.2222
p.T468M
DO41746
UCEC
ICGC
APSTS
DEG_SPOP_SBC_1
0.2222
p.S464F
TCGA-K4-A54R
BLCA
TCGA
APSTS
DEG_SPOP_SBC_1
0.7982
p.S464F
DO48611
BLCA
ICGC
APSTS
DEG_SPOP_SBC_1
0.7982
p.E450K
DO8858
COAD
ICGC
APSTS
DEG_SPOP_SBC_1
0.0556
p.T463M
DO227646
COCA
ICGC
APSTS
DEG_SPOP_SBC_1
0.7423
p.T463M
SIDM00951
T-Lymphoblastic Leukemia
GDSC
APSTS
DEG_SPOP_SBC_1
0.7423
p.T463M
ACH-000966
Ovarian Cancer
CCLE
APSTS
DEG_SPOP_SBC_1
0.7423
p.Y474H
DO234336
ESAD
ICGC
APSTS
DEG_SPOP_SBC_1
0.0556
p.Q472R
DO233871
GACA
ICGC
APSTS
DEG_SPOP_SBC_1
0.1111
p.P461T
DO228948
LICA
ICGC
APSTS
DEG_SPOP_SBC_1
0.5919
p.L467M
DO228974
LICA
ICGC
APSTS
DEG_SPOP_SBC_1
0.25
p.A460E
DO229028
LICA
ICGC
APSTS
DEG_SPOP_SBC_1
0.7701
p.Q472K
DO229038
LICA
ICGC
APSTS
DEG_SPOP_SBC_1
0.1111
p.S466C
DO229234
THCA
ICGC
APSTS
DEG_SPOP_SBC_1
0.2778
p.V465I
SIDM01171
Glioblastoma
GDSC
APSTS
DEG_SPOP_SBC_1
0.3056
p.D473Y
SIDM00250
Esophageal Squamous Cell Carcinoma
GDSC
APSTS
DEG_SPOP_SBC_1
0.0833
p.D473Y
TE-4
oesophagus
COSMIC
APSTS
DEG_SPOP_SBC_1
0.0833
p.R463C
SNU-175
large_intestine
COSMIC
APSTS
DEG_SPOP_SBC_1
0.8301
p.P450L
WM-115
skin
COSMIC
APSTS
DEG_SPOP_SBC_1
0.0556
p.D461Y
TE-4
oesophagus
COSMIC
APSTS
DEG_SPOP_SBC_1
0.7325
p.D453G
639-V
urinary_tract
COSMIC
APSTS
DEG_SPOP_SBC_1
0.1389
p.E459G
AN3-CA
endometrium
COSMIC
APSTS
DEG_SPOP_SBC_1
0.3056
Drug responses associated with CHFR mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of APSTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O00555
Voltage-dependent P/Q-type calcium channel subunit alpha-1A
DEG_SPOP_SBC_1
2270:2274
APSTS
SPOP
0.9988
More...
O60721
Sodium/potassium/calcium exchanger 1
DEG_SPOP_SBC_1
374:378
APSTS
SPOP
0.895
More...
O75376
Nuclear receptor corepressor 1
DEG_SPOP_SBC_1
760:764
APSTS
SPOP
0.9536
More...
O75962
Triple functional domain protein
DEG_SPOP_SBC_1
2330:2334
APSTS
SPOP
0.9832
More...
P11831
Serum response factor
DEG_SPOP_SBC_1
282:286
APSTS
SPOP
0.9986
More...
P20333
Tumor necrosis factor receptor superfamily member 1B
DEG_SPOP_SBC_1
236:240
APSTS
SPOP
0.8766
More...
P23193
Transcription elongation factor A protein 1
DEG_SPOP_SBC_1
133:137
APSTS
SPOP
0.9964
More...
P49321
Nuclear autoantigenic sperm protein
DEG_SPOP_SBC_1
26:30
APSTS
SPOP
0.9904
More...
Q07157
Tight junction protein ZO-1
DEG_SPOP_SBC_1
962:966
APSTS
SPOP
0.9991
More...
Q12816
Trophinin
DEG_SPOP_SBC_1
762:766
APSTS
SPOP
0.8531
More...
Q14123
Dual specificity Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1C
DEG_SPOP_SBC_1
641:645
APSTS
SPOP
0.9831
More...
Q15007
Pre-mRNA-splicing regulator WTAP
DEG_SPOP_SBC_1
248:252
APSTS
SPOP
0.9316
More...
Q16666
Gamma-interferon-inducible protein 16
DEG_SPOP_SBC_1
108:112
APSTS
SPOP
0.9976
More...
Q66K74
Microtubule-associated protein 1S
DEG_SPOP_SBC_1
565:569
APSTS
SPOP
0.972
More...
Q6IQ49
Replication stress response regulator SDE2
DEG_SPOP_SBC_1
238:242
APSTS
SPOP
0.999
More...
Q6ZRS2
Helicase SRCAP
DEG_SPOP_SBC_1
2700:2704
APSTS
SPOP
0.9449
More...
Q86V42
Protein FAM124A
DEG_SPOP_SBC_1
500:504
APSTS
SPOP
0.9876
More...
Q8IZC6
Collagen alpha-1
DEG_SPOP_SBC_1
374:378
APSTS
SPOP
0.9854
More...
Q8NCP5
Zinc finger and BTB domain-containing protein 44
DEG_SPOP_SBC_1
381:385
APSTS
SPOP
0.9707
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
5164:5168
APSTS
SPOP
0.9867
More...
Q96EP1
E3 ubiquitin-protein ligase CHFR
DEG_SPOP_SBC_1
460:464
APSTS
SPOP
0.8719
More...
Q96MG7
Non-structural maintenance of chromosomes element 3 homolog
DEG_SPOP_SBC_1
47:51
APSTS
SPOP
0.9985
More...
Q96N64
PWWP domain-containing protein 2A
DEG_SPOP_SBC_1
613:617
APSTS
SPOP
0.9195
More...
Q96T37
RNA-binding protein 15
DEG_SPOP_SBC_1
753:757
APSTS
SPOP
0.9492
More...
Q9H1K4
Mitochondrial glutamate carrier 2
DEG_SPOP_SBC_1
146:150
APSTS
SPOP
0.6475
More...
Q9H2X6
Homeodomain-interacting protein kinase 2
DEG_SPOP_SBC_1
573:577
APSTS
SPOP
0.9899
More...
Q9H8N7
Zinc finger protein 395
DEG_SPOP_SBC_1
64:68
APSTS
SPOP
0.9883
More...
Q9UHB7
AF4/FMR2 family member 4
DEG_SPOP_SBC_1
114:118
APSTS
SPOP
0.8965
More...
Q9Y566
SH3 and multiple ankyrin repeat domains protein 1
DEG_SPOP_SBC_1
1162:1166
APSTS
SPOP
0.9964
More...
P0C7U3
Probable palmitoyltransferase ZDHHC11B
DEG_SPOP_SBC_1
346:350
APSTS
SPOP
0.9986
More...
Q5FWE3
Proline-rich transmembrane protein 3
DEG_SPOP_SBC_1
411:415
APSTS
SPOP
0.9643
More...
Q8NCU7
C2 calcium-dependent domain-containing protein 4A
DEG_SPOP_SBC_1
226:230
APSTS
SPOP
0.999
More...
Q9BUT9
MAPK regulated corepressor interacting protein 2
DEG_SPOP_SBC_1
76:80
APSTS
SPOP
0.9973
More...
Q9H2Y9
Solute carrier organic anion transporter family member 5A1
DEG_SPOP_SBC_1
85:89
APSTS
SPOP
0.9092
More...
A6NM11
Leucine-rich repeat-containing protein 37A2
DEG_SPOP_SBC_1
1255:1259
APSTS
SPOP
0.9733
More...
O60309
Leucine-rich repeat-containing protein 37A3
DEG_SPOP_SBC_1
1255:1259
APSTS
SPOP
0.9531
More...
Q92545
Transmembrane protein 131
DEG_SPOP_SBC_1
1842:1846
APSTS
SPOP
0.9477
More...
Q9H8U3
AN1-type zinc finger protein 3
DEG_SPOP_SBC_1
49:53
APSTS
SPOP
0.8073
More...