DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
APSTS
Uniprot ID:
Q9H2X6
Source protein:
Homeodomain-interacting protein kinase 2
Source gene:
HIPK2
Class:
DEG_SPOP_SBC_1
Location:
573:577
E3 ligase:
SPOP
DEGRON score:
0.9899
ASA_SCORE:
71.76
COIL:
0.9268
CONS_SCORE:
0.3839
DSS_SCORE:
0.3696
HELIX:
0.0392
FCONS_SCORE:
1.0282
RIG_SCORE:
0.7295
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.F568L
TCGA-06-5416
GBM
TCGA
APSTS
DEG_SPOP_SBC_1
0.1944
p.F568L
DO10880
GBM
ICGC
APSTS
DEG_SPOP_SBC_1
0.1944
p.S577P
TCGA-FI-A2D5
UCEC
TCGA
APSTS
DEG_SPOP_SBC_1
0.6752
p.S577P
DO41331
UCEC
ICGC
APSTS
DEG_SPOP_SBC_1
0.6752
p.T570M
DO218535
BTCA
ICGC
APSTS
DEG_SPOP_SBC_1
0.25
p.N585K
DO228948
LICA
ICGC
APSTS
DEG_SPOP_SBC_1
0.1111
p.T570A
DO231830
LINC
ICGC
APSTS
DEG_SPOP_SBC_1
0.25
p.T576M
ACH-001521
Skin Cancer
CCLE
APSTS
DEG_SPOP_SBC_1
0.7423
p.T576S
ACH-001521
Skin Cancer
CCLE
APSTS
DEG_SPOP_SBC_1
0.6005
Drug responses associated with HIPK2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
SIDM00926
UNCLASSIFIED|lung_NSCLC_not_specified
p.E136D (No)
GDSC
PI-103
186.6479
SIDM00951
LAML|acute_myeloid_leukaemia
p.D502N (No)
GDSC
PI-103
1.081
SIDM00951
LAML|acute_myeloid_leukaemia
p.I227T (No)
GDSC
PI-103
1.081
SIDM00939
UNCLASSIFIED|lung_NSCLC_not_specified
p.G1184V (No)
GDSC
PI-103
0.1231
SIDM00680
COREAD|large_intestine
p.R554Q (No)
GDSC
PI-103
131.335
SIDM01045
UCEC|endometrium
p.L59fs*56 (No)
GDSC
PI-103
3.7811
SIDM00499
PRAD|prostate
p.G45D (No)
GDSC
PI-103
0.3537
SIDM00145
ALL|lymphoblastic_leukemia
p.N914K (No)
GDSC
PI-103
0.1685
SIDM00108
SKCM|melanoma
p.H322Q (No)
GDSC
PI-103
2.1752
SIDM00351
HNSC|head_and_neck
p.R868W (No)
GDSC
PI-103
1.0036
SIDM00976
SKCM|melanoma
p.G348R (No)
GDSC
PI-103
0.2229
SIDM00045
STAD|stomach
p.C658F (No)
GDSC
PI-103
0.7557
SIDM01107
SKCM|melanoma
p.T602P (No)
GDSC
PI-103
57.4273
SIDM01007
ALL|lymphoblastic_leukemia
p.H807R (No)
GDSC
PI-103
0.2023
SIDM01007
ALL|lymphoblastic_leukemia
p.K805R (No)
GDSC
PI-103
0.2023
SIDM01073
UNCLASSIFIED|hairy_cell_leukaemia
p.S142N (No)
GDSC
PI-103
0.2031
SIDM00742
LUAD|lung_NSCLC_adenocarcinoma
p.H760R (No)
GDSC
PI-103
2.0651
SIDM00565
HNSC|head_and_neck
p.V737M (No)
GDSC
PI-103
2.2952
SIDM00443
DLBC|B_cell_lymphoma
p.R941C (No)
GDSC
PI-103
0.0219
SIDM00377
UNCLASSIFIED|uterus
p.H540R (No)
GDSC
PI-103
2.6284
SIDM00498
COREAD|large_intestine
p.I603V (No)
GDSC
PI-103
3.2887
SIDM00793
UNCLASSIFIED|Burkitt_lymphoma
p.A624V (No)
GDSC
PI-103
0.0783
SIDM01045
UCEC|endometrium
p.V94E (No)
GDSC
PI-103
3.7811
SIDM00946
ALL|T_cell_leukemia
p.V50M (No)
GDSC
PI-103
0.526
SIDM00864
CESC|cervix
p.I875V (No)
GDSC
PI-103
23.1182
SIDM00523
SCLC|lung_small_cell_carcinoma
p.R433S (No)
GDSC
PI-103
131.0205
SIDM00217
COREAD|large_intestine
p.A1178V (No)
GDSC
PI-103
1.8634
SIDM00217
COREAD|large_intestine
p.E896K (No)
GDSC
PI-103
1.8634
SIDM01003
ALL|lymphoblastic_leukemia
p.R497Q (No)
GDSC
PI-103
0.2158
SIDM00216
COREAD|large_intestine
p.I146T (No)
GDSC
PI-103
20.9452
SIDM00596
UCEC|endometrium
p.R498Q (No)
GDSC
PI-103
22.6646
SIDM00282
COREAD|large_intestine
p.A719S (No)
GDSC
PI-103
28.6572
SIDM00660
COREAD|large_intestine
p.A512V (No)
GDSC
PI-103
0.5852
SIDM00955
SKCM|melanoma
p.T1022N (No)
GDSC
PI-103
14.8056
SIDM00783
COREAD|large_intestine
p.R792W (No)
GDSC
PI-103
0.5867
SIDM00845
UNCLASSIFIED|Burkitt_lymphoma
p.I33V (No)
GDSC
PI-103
0.0974
SIDM00789
COREAD|large_intestine
p.V67I (No)
GDSC
PI-103
0.8427
SIDM00534
COREAD|large_intestine
p.V1121A (No)
GDSC
PI-103
137.3337
SIDM00149
SKCM|melanoma
p.M635I (No)
GDSC
PI-103
3.9173
SIDM00545
SKCM|melanoma
p.R1056Q (No)
GDSC
PI-103
9.7833
SIDM00545
SKCM|melanoma
p.H524Y (No)
GDSC
PI-103
9.7833
SIDM00114
MESO|mesothelioma
p.L716I (No)
GDSC
PI-103
6.8017
SIDM01154
ALL|lymphoblastic_T_cell_leukaemia
p.R133H (No)
GDSC
PI-103
0.976
SIDM00451
ALL|lymphoblastic_T_cell_leukaemia
p.L108F (No)
GDSC
PI-103
0.2536
SIDM00339
LUAD|lung_NSCLC_adenocarcinoma
p.S317I (No)
GDSC
PI-103
17.6642
SIDM01018
UNCLASSIFIED|Hodgkin_lymphoma
p.F500V (No)
GDSC
PI-103
1.0649
SIDM01018
UNCLASSIFIED|Hodgkin_lymphoma
p.Y468N (No)
GDSC
PI-103
1.0649
SIDM00537
COREAD|large_intestine
p.T125A (No)
GDSC
PI-103
32.6383
SIDM00799
GBM|glioma
p.S1002Y (No)
GDSC
PI-103
54.1746
SIDM00496
THCA|thyroid
p.Q747K (No)
GDSC
PI-103
0.4742
SIDM00878
BRCA|breast
p.R833C (No)
GDSC
PI-103
0.1835
All proteins holding degron of APSTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O00555
Voltage-dependent P/Q-type calcium channel subunit alpha-1A
DEG_SPOP_SBC_1
2270:2274
APSTS
SPOP
0.9988
More...
O60721
Sodium/potassium/calcium exchanger 1
DEG_SPOP_SBC_1
374:378
APSTS
SPOP
0.895
More...
O75376
Nuclear receptor corepressor 1
DEG_SPOP_SBC_1
760:764
APSTS
SPOP
0.9536
More...
O75962
Triple functional domain protein
DEG_SPOP_SBC_1
2330:2334
APSTS
SPOP
0.9832
More...
P11831
Serum response factor
DEG_SPOP_SBC_1
282:286
APSTS
SPOP
0.9986
More...
P20333
Tumor necrosis factor receptor superfamily member 1B
DEG_SPOP_SBC_1
236:240
APSTS
SPOP
0.8766
More...
P23193
Transcription elongation factor A protein 1
DEG_SPOP_SBC_1
133:137
APSTS
SPOP
0.9964
More...
P49321
Nuclear autoantigenic sperm protein
DEG_SPOP_SBC_1
26:30
APSTS
SPOP
0.9904
More...
Q07157
Tight junction protein ZO-1
DEG_SPOP_SBC_1
962:966
APSTS
SPOP
0.9991
More...
Q12816
Trophinin
DEG_SPOP_SBC_1
762:766
APSTS
SPOP
0.8531
More...
Q14123
Dual specificity Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1C
DEG_SPOP_SBC_1
641:645
APSTS
SPOP
0.9831
More...
Q15007
Pre-mRNA-splicing regulator WTAP
DEG_SPOP_SBC_1
248:252
APSTS
SPOP
0.9316
More...
Q16666
Gamma-interferon-inducible protein 16
DEG_SPOP_SBC_1
108:112
APSTS
SPOP
0.9976
More...
Q66K74
Microtubule-associated protein 1S
DEG_SPOP_SBC_1
565:569
APSTS
SPOP
0.972
More...
Q6IQ49
Replication stress response regulator SDE2
DEG_SPOP_SBC_1
238:242
APSTS
SPOP
0.999
More...
Q6ZRS2
Helicase SRCAP
DEG_SPOP_SBC_1
2700:2704
APSTS
SPOP
0.9449
More...
Q86V42
Protein FAM124A
DEG_SPOP_SBC_1
500:504
APSTS
SPOP
0.9876
More...
Q8IZC6
Collagen alpha-1
DEG_SPOP_SBC_1
374:378
APSTS
SPOP
0.9854
More...
Q8NCP5
Zinc finger and BTB domain-containing protein 44
DEG_SPOP_SBC_1
381:385
APSTS
SPOP
0.9707
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
5164:5168
APSTS
SPOP
0.9867
More...
Q96EP1
E3 ubiquitin-protein ligase CHFR
DEG_SPOP_SBC_1
460:464
APSTS
SPOP
0.8719
More...
Q96MG7
Non-structural maintenance of chromosomes element 3 homolog
DEG_SPOP_SBC_1
47:51
APSTS
SPOP
0.9985
More...
Q96N64
PWWP domain-containing protein 2A
DEG_SPOP_SBC_1
613:617
APSTS
SPOP
0.9195
More...
Q96T37
RNA-binding protein 15
DEG_SPOP_SBC_1
753:757
APSTS
SPOP
0.9492
More...
Q9H1K4
Mitochondrial glutamate carrier 2
DEG_SPOP_SBC_1
146:150
APSTS
SPOP
0.6475
More...
Q9H2X6
Homeodomain-interacting protein kinase 2
DEG_SPOP_SBC_1
573:577
APSTS
SPOP
0.9899
More...
Q9H8N7
Zinc finger protein 395
DEG_SPOP_SBC_1
64:68
APSTS
SPOP
0.9883
More...
Q9UHB7
AF4/FMR2 family member 4
DEG_SPOP_SBC_1
114:118
APSTS
SPOP
0.8965
More...
Q9Y566
SH3 and multiple ankyrin repeat domains protein 1
DEG_SPOP_SBC_1
1162:1166
APSTS
SPOP
0.9964
More...
P0C7U3
Probable palmitoyltransferase ZDHHC11B
DEG_SPOP_SBC_1
346:350
APSTS
SPOP
0.9986
More...
Q5FWE3
Proline-rich transmembrane protein 3
DEG_SPOP_SBC_1
411:415
APSTS
SPOP
0.9643
More...
Q8NCU7
C2 calcium-dependent domain-containing protein 4A
DEG_SPOP_SBC_1
226:230
APSTS
SPOP
0.999
More...
Q9BUT9
MAPK regulated corepressor interacting protein 2
DEG_SPOP_SBC_1
76:80
APSTS
SPOP
0.9973
More...
Q9H2Y9
Solute carrier organic anion transporter family member 5A1
DEG_SPOP_SBC_1
85:89
APSTS
SPOP
0.9092
More...
A6NM11
Leucine-rich repeat-containing protein 37A2
DEG_SPOP_SBC_1
1255:1259
APSTS
SPOP
0.9733
More...
O60309
Leucine-rich repeat-containing protein 37A3
DEG_SPOP_SBC_1
1255:1259
APSTS
SPOP
0.9531
More...
Q92545
Transmembrane protein 131
DEG_SPOP_SBC_1
1842:1846
APSTS
SPOP
0.9477
More...
Q9H8U3
AN1-type zinc finger protein 3
DEG_SPOP_SBC_1
49:53
APSTS
SPOP
0.8073
More...