DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PFSSS
Uniprot ID:
Q9UQR0
Source protein:
Sex comb on midleg-like protein 2
Source gene:
SCML2
Class:
DEG_SPOP_SBC_1
Location:
466:470
E3 ligase:
SPOP
DEGRON score:
0.9364
ASA_SCORE:
52.96
COIL:
0.7438
CONS_SCORE:
0.7168
DSS_SCORE:
0.512
HELIX:
0.129
FCONS_SCORE:
1.0322
RIG_SCORE:
0.5625
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R471M
TCGA-AA-3818
COAD
TCGA
PFSSS
DEG_SPOP_SBC_1
0.3056
p.R471M
DO7792
COAD
ICGC
PFSSS
DEG_SPOP_SBC_1
0.3056
p.N460H
TCGA-AX-A2HC
UCEC
TCGA
PFSSS
DEG_SPOP_SBC_1
0.1667
p.N460H
DO41572
UCEC
ICGC
PFSSS
DEG_SPOP_SBC_1
0.1667
p.H475Q
TCGA-D3-A2JE
SKCM
TCGA
PFSSS
DEG_SPOP_SBC_1
0.1944
p.H475Q
DO219476
SKCM
ICGC
PFSSS
DEG_SPOP_SBC_1
0.1944
p.S470F
TCGA-W3-AA1V
SKCM
TCGA
PFSSS
DEG_SPOP_SBC_1
0.7982
p.S470F
DO51276
SKCM
ICGC
PFSSS
DEG_SPOP_SBC_1
0.7982
p.G472D
DO233652
GACA
ICGC
PFSSS
DEG_SPOP_SBC_1
0.2778
p.L461V
DO228394
MALY
ICGC
PFSSS
DEG_SPOP_SBC_1
0.1944
p.H480N
DO50705
ORCA
ICGC
PFSSS
DEG_SPOP_SBC_1
0.0556
p.G472V
DO229208
THCA
ICGC
PFSSS
DEG_SPOP_SBC_1
0.2778
p.S464C
SIDM00495
B-Cell Non-Hodgkin's Lymphoma
GDSC
PFSSS
DEG_SPOP_SBC_1
0.2778
p.S464C
ACH-000697
Lymphoma
CCLE
PFSSS
DEG_SPOP_SBC_1
0.2778
p.S464C
A3-KAW
haematopoietic_and_lymphoid_tissue
COSMIC
PFSSS
DEG_SPOP_SBC_1
0.2778
p.S469Y
SIDM00118
Colorectal Carcinoma
GDSC
PFSSS
DEG_SPOP_SBC_1
0.712
p.S469Y
ACH-001081
Colon/Colorectal Cancer
CCLE
PFSSS
DEG_SPOP_SBC_1
0.712
p.S469Y
HCC2998
large_intestine
COSMIC
PFSSS
DEG_SPOP_SBC_1
0.712
p.S468I
ACH-000455
Brain Cancer
CCLE
PFSSS
DEG_SPOP_SBC_1
0.7341
Drug responses associated with SCML2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PFSSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O14526
F-BAR domain only protein 1
DEG_SPOP_SBC_1
463:467
PFSSS
SPOP
0.7117
More...
O14686
Histone-lysine N-methyltransferase 2D
DEG_SPOP_SBC_1
3172:3176
PFSSS
SPOP
0.987
More...
O15049
NEDD4-binding protein 3
DEG_SPOP_SBC_1
207:211
PFSSS
SPOP
0.9962
More...
O43294
Transforming growth factor beta-1-induced transcript 1 protein
DEG_SPOP_SBC_1
78:82
PFSSS
SPOP
0.9307
More...
O75385
Serine/threonine-protein kinase ULK1
DEG_SPOP_SBC_1
420:424
PFSSS
SPOP
0.9904
More...
O75916
Regulator of G-protein signaling 9
DEG_SPOP_SBC_1
495:499
PFSSS
SPOP
0.9118
More...
P16333
Cytoplasmic protein NCK1
DEG_SPOP_SBC_1
200:204
PFSSS
SPOP
0.8259
More...
P25054
Adenomatous polyposis coli protein
DEG_SPOP_SBC_1
2761:2765
PFSSS
SPOP
0.996
More...
P33076
MHC class II transactivator
DEG_SPOP_SBC_1
211:215
PFSSS
SPOP
0.9232
More...
P98082
Disabled homolog 2
DEG_SPOP_SBC_1
365:369
PFSSS
SPOP
0.9901
More...
Q03164
Histone-lysine N-methyltransferase 2A
DEG_SPOP_SBC_1
826:830
PFSSS
SPOP
0.929
More...
Q3SXY7
Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 3
DEG_SPOP_SBC_1
414:418
PFSSS
SPOP
0.7392
More...
Q5T011
KICSTOR complex protein SZT2
DEG_SPOP_SBC_1
1367:1371
PFSSS
SPOP
0.6184
More...
Q68DE3
Basic helix-loop-helix domain-containing protein USF3
DEG_SPOP_SBC_1
1896:1900
PFSSS
SPOP
0.9564
More...
Q6RI45
Bromodomain and WD repeat-containing protein 3
DEG_SPOP_SBC_1
1518:1522
PFSSS
SPOP
0.8389
More...
Q8IZP9
Adhesion G-protein coupled receptor G2
DEG_SPOP_SBC_1
254:258
PFSSS
SPOP
0.786
More...
Q8N6G6
ADAMTS-like protein 1
DEG_SPOP_SBC_1
836:840
PFSSS
SPOP
0.7453
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
10331:10335
PFSSS
SPOP
0.9441
More...
Q96J92
Serine/threonine-protein kinase WNK4
DEG_SPOP_SBC_1
864:868
PFSSS
SPOP
0.8261
More...
Q9BX66
Sorbin and SH3 domain-containing protein 1
DEG_SPOP_SBC_1
941:945
PFSSS
SPOP
0.9991
More...
Q9BYP7
Serine/threonine-protein kinase WNK3
DEG_SPOP_SBC_1
1144:1148
PFSSS
SPOP
0.938
More...
Q9HAK2
Transcription factor COE2
DEG_SPOP_SBC_1
527:531
PFSSS
SPOP
0.7804
More...
Q9NX40
OCIA domain-containing protein 1
DEG_SPOP_SBC_1
163:167
PFSSS
SPOP
0.9989
More...
Q9UBC2
Epidermal growth factor receptor substrate 15-like 1
DEG_SPOP_SBC_1
710:714
PFSSS
SPOP
0.9988
More...
Q9UQR0
Sex comb on midleg-like protein 2
DEG_SPOP_SBC_1
466:470
PFSSS
SPOP
0.9364
More...
Q86W28
NACHT, LRR and PYD domains-containing protein 8
DEG_SPOP_SBC_1
13:17
PFSSS
SPOP
0.9844
More...
Q8NDH2
Leucine-rich repeat transmembrane protein CCDC168
DEG_SPOP_SBC_1
350:354
PFSSS
SPOP
0.9972
More...
Q92545
Transmembrane protein 131
DEG_SPOP_SBC_1
1803:1807
PFSSS
SPOP
0.6327
More...
Q9ULL1
Pleckstrin homology domain-containing family G member 1
DEG_SPOP_SBC_1
61:65
PFSSS
SPOP
0.9867
More...
P0C879
Putative uncharacterized protein FLJ43185
DEG_SPOP_SBC_1
53:57
PFSSS
SPOP
0.9272
More...