DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PPRY
Uniprot ID:
Q6VAB6
Source protein:
Kinase suppressor of Ras 2
Source gene:
KSR2
Class:
ITCH
Location:
486:489
E3 ligase:
ITCH,NEDD4
DEGRON score:
0.9326
ASA_SCORE:
92.55
COIL:
0.9025
CONS_SCORE:
0.3353
DSS_SCORE:
0.5082
HELIX:
0.0582
FCONS_SCORE:
0.9612
RIG_SCORE:
0.6931
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Q496E
TCGA-74-6575
GBM
TCGA
PPRY
ITCH
0.1389
p.P476L
TCGA-A5-A0G2
UCEC
TCGA
PPRY
ITCH
0.0556
p.P476L
TCGA-D3-A2JP
SKCM
TCGA
PPRY
ITCH
0.0556
p.P476L
DO222662
MELA
ICGC
PPRY
ITCH
0.0556
p.P476L
DO47407
SKCM
ICGC
PPRY
ITCH
0.0556
p.P476L
DO41235
UCEC
ICGC
PPRY
ITCH
0.0556
p.R488H
TCGA-B5-A3FC
UCEC
TCGA
PPRY
ITCH
0.7133
p.P482S
TCGA-CG-4437
STAD
TCGA
PPRY
ITCH
0.2222
p.P482S
TCGA-FW-A3R5
SKCM
TCGA
PPRY
ITCH
0.2222
p.D478N
TCGA-EE-A2MF
SKCM
TCGA
PPRY
ITCH
0.1111
p.P499T
TCGA-FS-A1ZB
SKCM
TCGA
PPRY
ITCH
0.0556
p.R484Q
TCGA-FW-A3R5
SKCM
TCGA
PPRY
ITCH
0.2778
p.R484Q
DO222363
MELA
ICGC
PPRY
ITCH
0.2778
p.K485T
TCGA-L5-A4OT
ESCA
TCGA
PPRY
ITCH
0.3056
p.K485T
DO233165
GACA
ICGC
PPRY
ITCH
0.3056
p.R484W
DO222769
COCA
ICGC
PPRY
ITCH
0.2778
p.T497M
DO234401
ESAD
ICGC
PPRY
ITCH
0.5556
p.H493Q
DO229031
LICA
ICGC
PPRY
ITCH
0.2222
p.P483R
DO219261
PRAD
ICGC
PPRY
ITCH
0.25
p.S488F
DO51761
STAD
ICGC
PPRY
ITCH
0.7982
p.T496A
SIDM01004
Chronic Myelogenous Leukemia
GDSC
PPRY
ITCH
0.1389
p.T496A
KCL-22
haematopoietic_and_lymphoid_tissue
COSMIC
PPRY
ITCH
0.1389
p.D487N
SIDM01016
T-Lymphoblastic Leukemia
GDSC
PPRY
ITCH
0.6932
p.D487N
Jurkat
haematopoietic_and_lymphoid_tissue
COSMIC
PPRY
ITCH
0.6932
p.P499L
ACH-000553
Lung Cancer
CCLE
PPRY
ITCH
0.0556
p.N480S
ACH-000768
Breast Cancer
CCLE
PPRY
ITCH
0.1667
p.N480S
MDA-MB-231
breast
COSMIC
PPRY
ITCH
0.1667
p.N481T
HCC1569
breast
COSMIC
PPRY
ITCH
0.1944
Drug responses associated with KSR2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PPRY
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A6ND36
Protein FAM83G
ITCH
717:720
PPRY
ITCH,NEDD4
0.7033
More...
O00299
Chloride intracellular channel protein 1
ITCH
90:93
PPRY
ITCH,NEDD4
0.8886
More...
O15247
Chloride intracellular channel protein 2
ITCH
96:99
PPRY
ITCH,NEDD4
0.9319
More...
O43313
ATM interactor
ITCH
287:290
PPRY
ITCH,NEDD4
0.9841
More...
O43435
T-box transcription factor TBX1
ITCH
47:50
PPRY
ITCH,NEDD4
0.9424
More...
O75208
Ubiquinone biosynthesis protein COQ9, mitochondrial
ITCH
79:82
PPRY
ITCH,NEDD4
0.8635
More...
O95793
Double-stranded RNA-binding protein Staufen homolog 1
ITCH
113:116
PPRY
ITCH,NEDD4
0.9455
More...
P05198
Eukaryotic translation initiation factor 2 subunit 1
ITCH
232:235
PPRY
ITCH,NEDD4
0.6815
More...
P21860
Receptor tyrosine-protein kinase erbB-3
ITCH
972:975
PPRY
ITCH,NEDD4
0.9993
More...
P30876
DNA-directed RNA polymerase II subunit RPB2
ITCH
81:84
PPRY
ITCH,NEDD4
0.9176
More...
P53007
Tricarboxylate transport protein, mitochondrial
ITCH
61:64
PPRY
ITCH,NEDD4
0.7489
More...
P54753
Ephrin type-B receptor 3
ITCH
438:441
PPRY
ITCH,NEDD4
0.969
More...
Q09327
Beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase
ITCH
148:151
PPRY
ITCH,NEDD4
0.9144
More...
Q13825
Methylglutaconyl-CoA hydratase, mitochondrial
ITCH
333:336
PPRY
ITCH,NEDD4
0.5278
More...
Q14332
Frizzled-2
ITCH
189:192
PPRY
ITCH,NEDD4
0.5291
More...
Q14526
Hypermethylated in cancer 1 protein
ITCH
377:380
PPRY
ITCH,NEDD4
0.9217
More...
Q5CZC0
Fibrous sheath-interacting protein 2
ITCH
5867:5870
PPRY
ITCH,NEDD4
0.994
More...
Q5VT52
Regulation of nuclear pre-mRNA domain-containing protein 2
ITCH
1458:1461
PPRY
ITCH,NEDD4
0.5362
More...
Q6VAB6
Kinase suppressor of Ras 2
ITCH
486:489
PPRY
ITCH,NEDD4
0.9326
More...
Q86TB9
Protein PAT1 homolog 1
ITCH
221:224
PPRY
ITCH,NEDD4
0.9488
More...
Q8TC29
Enkurin
ITCH
24:27
PPRY
ITCH,NEDD4
0.9988
More...
Q8WUF5
RelA-associated inhibitor
ITCH
67:70
PPRY
ITCH,NEDD4
0.994
More...
Q8WWW0
Ras association domain-containing protein 5
ITCH
21:24
PPRY
ITCH,NEDD4
0.8918
More...
Q96NY7
Chloride intracellular channel protein 6
ITCH
553:556
PPRY
ITCH,NEDD4
0.9782
More...
Q96SN8
CDK5 regulatory subunit-associated protein 2
ITCH
1239:1242
PPRY
ITCH,NEDD4
0.9754
More...
Q96T58
Msx2-interacting protein
ITCH
771:774
PPRY
ITCH,NEDD4
0.7541
More...
Q99959
Plakophilin-2
ITCH
191:194
PPRY
ITCH,NEDD4
0.9964
More...
Q9H2D6
TRIO and F-actin-binding protein
ITCH
1029:1032
PPRY
ITCH,NEDD4
0.9563
More...
Q9NQL9
Doublesex- and mab-3-related transcription factor 3
ITCH
365:368
PPRY
ITCH,NEDD4
0.9917
More...
Q9NR12
PDZ and LIM domain protein 7
ITCH
101:104
PPRY
ITCH,NEDD4
0.9771
More...
Q9NU39
Forkhead box protein D4-like 1
ITCH
266:269
PPRY
ITCH,NEDD4
0.9298
More...
Q9NYQ8
Protocadherin Fat 2
ITCH
4240:4243
PPRY
ITCH,NEDD4
0.9922
More...
Q9UJV9
Probable ATP-dependent RNA helicase DDX41
ITCH
148:151
PPRY
ITCH,NEDD4
0.9995
More...
Q9ULH7
Myocardin-related transcription factor B
ITCH
871:874
PPRY
ITCH,NEDD4
0.999
More...
O15417
Trinucleotide repeat-containing gene 18 protein
ITCH
1079:1082
PPRY
ITCH,NEDD4
0.9345
More...
Q8WVE6
Transmembrane protein 171
ITCH
301:304
PPRY
ITCH,NEDD4
0.9994
More...