DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PPRY
Uniprot ID:
Q9NQL9
Source protein:
Doublesex- and mab-3-related transcription factor 3
Source gene:
DMRT3
Class:
ITCH
Location:
365:368
E3 ligase:
ITCH,NEDD4
DEGRON score:
0.9917
ASA_SCORE:
56.1
COIL:
0.92
CONS_SCORE:
0.6553
DSS_SCORE:
0.5284
HELIX:
0.0243
FCONS_SCORE:
1.1405
RIG_SCORE:
0.7025
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G356W
TCGA-05-4424
LUAD
TCGA
PPRY
ITCH
0.0833
p.G356W
DO23672
LUAD
ICGC
PPRY
ITCH
0.0833
p.L358V
TCGA-69-7980
LUAD
TCGA
PPRY
ITCH
0.1389
p.L358V
DO23678
LUAD
ICGC
PPRY
ITCH
0.1389
p.Q364R
TCGA-A6-2686
COAD
TCGA
PPRY
ITCH
0.3056
p.Q364R
DO7828
COAD
ICGC
PPRY
ITCH
0.3056
p.R373M
TCGA-B5-A0JY
UCEC
TCGA
PPRY
ITCH
0.1944
p.R373M
DO43041
UCEC
ICGC
PPRY
ITCH
0.1944
p.R367Q
TCGA-B5-A3FC
UCEC
TCGA
PPRY
ITCH
0.6218
p.R367Q
DO41871
UCEC
ICGC
PPRY
ITCH
0.6218
p.T375A
TCGA-G3-AAV4
LIHC
TCGA
PPRY
ITCH
0.1389
p.T375A
DO52298
LIHC
ICGC
PPRY
ITCH
0.1389
p.A355V
TCGA-GN-A266
SKCM
TCGA
PPRY
ITCH
0.0556
p.A355V
DO37432
SKCM
ICGC
PPRY
ITCH
0.0556
p.R367W
DO225249
BRCA
ICGC
PPRY
ITCH
0.7523
p.G356V
DO229016
COCA
ICGC
PPRY
ITCH
0.0833
p.G356V
DO234285
ESAD
ICGC
PPRY
ITCH
0.0833
p.G356V
DO229353
LAML
ICGC
PPRY
ITCH
0.0833
p.G356V
DO231140
LAML
ICGC
PPRY
ITCH
0.0833
p.G356V
DO230545
LUSC
ICGC
PPRY
ITCH
0.0833
p.G356V
DO231051
LUSC
ICGC
PPRY
ITCH
0.0833
p.R373S
DO229028
LICA
ICGC
PPRY
ITCH
0.1944
p.M371T
SIDM01007
T-Lymphoblastic Leukemia
GDSC
PPRY
ITCH
0.25
p.M371T
ACH-002256
Leukemia
CCLE
PPRY
ITCH
0.25
p.M371T
KARPAS-45
haematopoietic_and_lymphoid_tissue
COSMIC
PPRY
ITCH
0.25
p.P366L
SIDM00150
Colorectal Carcinoma
GDSC
PPRY
ITCH
0.7582
p.P366L
ACH-000969
Colon/Colorectal Cancer
CCLE
PPRY
ITCH
0.7582
p.P366L
KM12
large_intestine
COSMIC
PPRY
ITCH
0.7582
p.P361S
SIDM01611
Endometrial Carcinoma
GDSC
PPRY
ITCH
0.2222
p.P361S
ACH-000996
Endometrial/Uterine Cancer
CCLE
PPRY
ITCH
0.2222
p.T375N
ACH-002061
Leukemia
CCLE
PPRY
ITCH
0.1389
Drug responses associated with DMRT3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PPRY
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A6ND36
Protein FAM83G
ITCH
717:720
PPRY
ITCH,NEDD4
0.7033
More...
O00299
Chloride intracellular channel protein 1
ITCH
90:93
PPRY
ITCH,NEDD4
0.8886
More...
O15247
Chloride intracellular channel protein 2
ITCH
96:99
PPRY
ITCH,NEDD4
0.9319
More...
O43313
ATM interactor
ITCH
287:290
PPRY
ITCH,NEDD4
0.9841
More...
O43435
T-box transcription factor TBX1
ITCH
47:50
PPRY
ITCH,NEDD4
0.9424
More...
O75208
Ubiquinone biosynthesis protein COQ9, mitochondrial
ITCH
79:82
PPRY
ITCH,NEDD4
0.8635
More...
O95793
Double-stranded RNA-binding protein Staufen homolog 1
ITCH
113:116
PPRY
ITCH,NEDD4
0.9455
More...
P05198
Eukaryotic translation initiation factor 2 subunit 1
ITCH
232:235
PPRY
ITCH,NEDD4
0.6815
More...
P21860
Receptor tyrosine-protein kinase erbB-3
ITCH
972:975
PPRY
ITCH,NEDD4
0.9993
More...
P30876
DNA-directed RNA polymerase II subunit RPB2
ITCH
81:84
PPRY
ITCH,NEDD4
0.9176
More...
P53007
Tricarboxylate transport protein, mitochondrial
ITCH
61:64
PPRY
ITCH,NEDD4
0.7489
More...
P54753
Ephrin type-B receptor 3
ITCH
438:441
PPRY
ITCH,NEDD4
0.969
More...
Q09327
Beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase
ITCH
148:151
PPRY
ITCH,NEDD4
0.9144
More...
Q13825
Methylglutaconyl-CoA hydratase, mitochondrial
ITCH
333:336
PPRY
ITCH,NEDD4
0.5278
More...
Q14332
Frizzled-2
ITCH
189:192
PPRY
ITCH,NEDD4
0.5291
More...
Q14526
Hypermethylated in cancer 1 protein
ITCH
377:380
PPRY
ITCH,NEDD4
0.9217
More...
Q5CZC0
Fibrous sheath-interacting protein 2
ITCH
5867:5870
PPRY
ITCH,NEDD4
0.994
More...
Q5VT52
Regulation of nuclear pre-mRNA domain-containing protein 2
ITCH
1458:1461
PPRY
ITCH,NEDD4
0.5362
More...
Q6VAB6
Kinase suppressor of Ras 2
ITCH
486:489
PPRY
ITCH,NEDD4
0.9326
More...
Q86TB9
Protein PAT1 homolog 1
ITCH
221:224
PPRY
ITCH,NEDD4
0.9488
More...
Q8TC29
Enkurin
ITCH
24:27
PPRY
ITCH,NEDD4
0.9988
More...
Q8WUF5
RelA-associated inhibitor
ITCH
67:70
PPRY
ITCH,NEDD4
0.994
More...
Q8WWW0
Ras association domain-containing protein 5
ITCH
21:24
PPRY
ITCH,NEDD4
0.8918
More...
Q96NY7
Chloride intracellular channel protein 6
ITCH
553:556
PPRY
ITCH,NEDD4
0.9782
More...
Q96SN8
CDK5 regulatory subunit-associated protein 2
ITCH
1239:1242
PPRY
ITCH,NEDD4
0.9754
More...
Q96T58
Msx2-interacting protein
ITCH
771:774
PPRY
ITCH,NEDD4
0.7541
More...
Q99959
Plakophilin-2
ITCH
191:194
PPRY
ITCH,NEDD4
0.9964
More...
Q9H2D6
TRIO and F-actin-binding protein
ITCH
1029:1032
PPRY
ITCH,NEDD4
0.9563
More...
Q9NQL9
Doublesex- and mab-3-related transcription factor 3
ITCH
365:368
PPRY
ITCH,NEDD4
0.9917
More...
Q9NR12
PDZ and LIM domain protein 7
ITCH
101:104
PPRY
ITCH,NEDD4
0.9771
More...
Q9NU39
Forkhead box protein D4-like 1
ITCH
266:269
PPRY
ITCH,NEDD4
0.9298
More...
Q9NYQ8
Protocadherin Fat 2
ITCH
4240:4243
PPRY
ITCH,NEDD4
0.9922
More...
Q9UJV9
Probable ATP-dependent RNA helicase DDX41
ITCH
148:151
PPRY
ITCH,NEDD4
0.9995
More...
Q9ULH7
Myocardin-related transcription factor B
ITCH
871:874
PPRY
ITCH,NEDD4
0.999
More...
O15417
Trinucleotide repeat-containing gene 18 protein
ITCH
1079:1082
PPRY
ITCH,NEDD4
0.9345
More...
Q8WVE6
Transmembrane protein 171
ITCH
301:304
PPRY
ITCH,NEDD4
0.9994
More...