DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VSSTS
Uniprot ID:
Q8IVL0
Source protein:
Neuron navigator 3
Source gene:
NAV3
Class:
DEG_SPOP_SBC_1
Location:
1552:1556
E3 ligase:
SPOP
DEGRON score:
0.936
ASA_SCORE:
71.32
COIL:
0.765
CONS_SCORE:
0.4837
DSS_SCORE:
0.4138
HELIX:
0.1002
FCONS_SCORE:
1.1845
RIG_SCORE:
0.6583
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T1555N
DO232761
PBCA
ICGC
VSSTS
DEG_SPOP_SBC_1
0.7055
p.V1552L
DO229045
LICA
ICGC
VSSTS
DEG_SPOP_SBC_1
0.6765
p.S1552P
CCK-81
large_intestine
COSMIC
VSSTS
DEG_SPOP_SBC_1
0.6752
p.S1556T
TCGA-F5-6814
READ
TCGA
VSSTS
DEG_SPOP_SBC_1
0.6005
p.S1556T
DO36556
READ
ICGC
VSSTS
DEG_SPOP_SBC_1
0.6005
p.L1558I
TCGA-FS-A1ZG
SKCM
TCGA
VSSTS
DEG_SPOP_SBC_1
0.2778
p.L1558I
DO37523
SKCM
ICGC
VSSTS
DEG_SPOP_SBC_1
0.2778
p.H1550N
FADU
upper_aerodigestive_tract
COSMIC
VSSTS
DEG_SPOP_SBC_1
0.2778
p.S1548L
DO51467
PACA
ICGC
VSSTS
DEG_SPOP_SBC_1
0.2222
p.S1548A
SIDM00850
Gastric Carcinoma
GDSC
VSSTS
DEG_SPOP_SBC_1
0.2222
p.S1548A
ACH-000880
Gastric Cancer
CCLE
VSSTS
DEG_SPOP_SBC_1
0.2222
p.S1548A
AGS
stomach
COSMIC
VSSTS
DEG_SPOP_SBC_1
0.2222
p.E1563K
TCGA-ZF-A9R7
BLCA
TCGA
VSSTS
DEG_SPOP_SBC_1
0.1389
p.E1563K
DO219064
BLCA
ICGC
VSSTS
DEG_SPOP_SBC_1
0.1389
p.H1545N
SIDM00747
Non-Small Cell Lung Carcinoma
GDSC
VSSTS
DEG_SPOP_SBC_1
0.1389
p.H1545N
ACH-000744
Lung Cancer
CCLE
VSSTS
DEG_SPOP_SBC_1
0.1389
p.H1545N
NCI-H1623
lung
COSMIC
VSSTS
DEG_SPOP_SBC_1
0.1389
p.V1544I
TCGA-B0-5088
KIRC
TCGA
VSSTS
DEG_SPOP_SBC_1
0.1111
p.V1544I
DO17742
KIRC
ICGC
VSSTS
DEG_SPOP_SBC_1
0.1111
p.V1544A
SIDM00487
Colorectal Carcinoma
GDSC
VSSTS
DEG_SPOP_SBC_1
0.1111
p.V1544A
CCK-81
large_intestine
COSMIC
VSSTS
DEG_SPOP_SBC_1
0.1111
Showing 1 to 21 of 21 entries
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Drug responses associated with NAV3 mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
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All proteins holding degron of VSSTS
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8TCU4
Alstrom syndrome protein 1
DEG_SPOP_SBC_1
664:668
VSSTS
SPOP
0.9924
More...
Q9H4G0
Band 4.1-like protein 1
DEG_SPOP_SBC_1
610:614
VSSTS
SPOP
0.92
More...
Q9HCM4
Band 4.1-like protein 5
DEG_SPOP_SBC_1
655:659
VSSTS
SPOP
0.9712
More...
P32246
C-C chemokine receptor type 1
DEG_SPOP_SBC_1
339:343
VSSTS
SPOP
0.8417
More...
Q4AC94
C2 domain-containing protein 3
DEG_SPOP_SBC_1
150:154
VSSTS
SPOP
0.7703
More...
P98194
Calcium-transporting ATPase type 2C member 1
DEG_SPOP_SBC_1
909:913
VSSTS
SPOP
0.7013
More...
Q14444
Caprin-1
DEG_SPOP_SBC_1
435:439
VSSTS
SPOP
0.9876
More...
Q96P56
Cation channel sperm-associated protein 2
DEG_SPOP_SBC_1
446:450
VSSTS
SPOP
0.9902
More...
P15336
Cyclic AMP-dependent transcription factor ATF-2
DEG_SPOP_SBC_1
463:467
VSSTS
SPOP
0.9197
More...
Q9UER7
Death domain-associated protein 6
DEG_SPOP_SBC_1
608:612
VSSTS
SPOP
0.9192
More...
Q7Z7J5
Developmental pluripotency-associated protein 2
DEG_SPOP_SBC_1
44:48
VSSTS
SPOP
0.9982
More...
P49792
E3 SUMO-protein ligase RanBP2
DEG_SPOP_SBC_1
2497:2501
VSSTS
SPOP
0.9395
More...
Q5JQS6
Germinal center-associated signaling and motility-like protein
DEG_SPOP_SBC_1
50:54
VSSTS
SPOP
0.9925
More...
Q2T9L4
Inhibitory synaptic factor 1
DEG_SPOP_SBC_1
78:82
VSSTS
SPOP
0.9827
More...
Q6TDP4
Kelch-like protein 17
DEG_SPOP_SBC_1
637:641
VSSTS
SPOP
0.7137
More...
Q9NZQ3
NCK-interacting protein with SH3 domain
DEG_SPOP_SBC_1
218:222
VSSTS
SPOP
0.9877
More...
Q8IVL1
Neuron navigator 2
DEG_SPOP_SBC_1
1675:1679
VSSTS
SPOP
0.8575
More...
Q8IVL0
Neuron navigator 3
DEG_SPOP_SBC_1
1552:1556
VSSTS
SPOP
0.936
More...
P35658
Nuclear pore complex protein Nup214
DEG_SPOP_SBC_1
984:988
VSSTS
SPOP
0.9993
More...
Q9Y6Q9
Nuclear receptor coactivator 3
DEG_SPOP_SBC_1
667:671
VSSTS
SPOP
0.9399
More...
O15544
Protein GR6
DEG_SPOP_SBC_1
16:20
VSSTS
SPOP
0.9463
More...
Q92833
Protein Jumonji
DEG_SPOP_SBC_1
88:92
VSSTS
SPOP
0.985
More...
Q8N9Q2
Protein SREK1IP1
DEG_SPOP_SBC_1
44:48
VSSTS
SPOP
0.9807
More...
C9J202
Putative glycosyltransferase ALG1L2
DEG_SPOP_SBC_1
78:82
VSSTS
SPOP
0.7087
More...
Q9C0F0
Putative Polycomb group protein ASXL3
DEG_SPOP_SBC_1
1217:1221
VSSTS
SPOP
0.755
More...
Showing 1 to 25 of 38 entries
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