Search results: The pahtway p3961 has 108 genes in the original annotation. Currently, there are 68 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group ? Functional group ?
6387CXCL12IRH | PBSF | SCYB12 | SDF1 | TLSF | TPAR1C-X-C motif chemokine ligand 1210q11.1CV:GWAScat
CV:GWASdb
CV:PGCnp
Expression
PMID:cooccur
7414VCLCMD1W | CMH15 | HEL114 | MV | MVCLvinculin10q22.2CV:PGCnp
Network
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
10570DPYSL4CRMP3 | DRP-4 | ULIP4dihydropyrimidinase like 410q26CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_IIA
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
55107ANO1DOG1 | ORAOV2 | TAOS2 | TMEM16Aanoctamin 111q13.3CV:PGCnp
DMG:Wockner_2014
1740DLG2PPP1R58 | PSD-93 | PSD93 | chapsyn-110discs large homolog 211q14.1CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
GO_Annotation
Network
PMID:cooccur
PROTEIN CLUSTERING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_PocklingtonH1
G2Cdb.human_Synaptosome
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
4312MMP1CLG | CLGNmatrix metallopeptidase 111q22.3PMID:cooccur
3887KRT81HB1 | Hb-1 | KRTHB1 | MLN137 | ghHkb1 | hHAKB2-1keratin 8112q13CV:PGCnp
10220GDF11BMP-11 | BMP11growth differentiation factor 1112q13.2CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
4193MDM2ACTFS | HDMX | hdm2MDM2 proto-oncogene12q14.3-q15CV:PGCnp
Network
PMID:cooccur
23390ZDHHC17HIP14 | HIP3 | HSPC294 | HYPHzinc finger DHHC-type containing 1712q21.2CV:PGCnp
DMG:Wockner_2014
Network
23457ABCB9EST122234 | TAPLATP binding cassette subfamily B member 912q24CV:PGCnp
DMG:Jaffe_2016
22953P2RX2DFNA41 | P2X2purinergic receptor P2X 212q24.33CV:PGCnp
Expression
GO_Annotation
22873DZIP1DZIP | DZIPt1DAZ interacting zinc finger protein 113q32.1CV:PGCnp
54813KLHL28BTBD5kelch like family member 2814q21.2CV:PGCnp
90141EFCAB11C14orf143EF-hand calcium binding domain 1114q32.11CV:PGCnp
PMID:cooccur
2628GATMAGAT | AT | CCDS3glycine amidinotransferase15q21.1DMG:Wockner_2014
23108RAP1GAP2GARNL4 | RAP1GA3RAP1 GTPase activating protein 217p13.3CV:PGCnp
DMG:Montano_2016
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
1440CSF3C17orf33 | CSF3OS | GCSFcolony stimulating factor 317q11.2-q12CV:PGCnp
5914RARANR1B1 | RARretinoic acid receptor alpha17q21CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
79755ZNF750ZFP750zinc finger protein 75017q25.3CV:GWASdb
CV:PGCnp
PMID:cooccur
5055SERPINB2HsT1201 | PAI | PAI-2 | PAI2 | PLANH2serpin peptidase inhibitor, clade B (ovalbumin), member 218q21.3DMG:Wockner_2014
GO_Annotation
23149FCHO1-FCH domain only 119p13.11CV:PGCnpCompositeSet
Darnell FMRP targets
27159CHIAAMCASE | CHIT2 | TSA1902chitinase, acidic1p13.2CV:PGCnp
GSMA_I
PMID:cooccur
79570NKAIN1FAM77CNa+/K+ transporting ATPase interacting 11p35.2CV:PGCnp
57185NIPAL3DJ462O23.2 | NPAL3NIPA like domain containing 31p36.12-p35.1CV:PGCnp
DNM:Fromer_2014
CompositeSet
1401CRPPTX1C-reactive protein, pentraxin-related1q23.2CV:PGCnp
GR_Ng
GSMA_I
GSMA_IIA
PMID:cooccur
5743PTGS2COX-2 | COX2 | GRIPGHS | PGG/HS | PGHS-2 | PHS-2 | hCox-2prostaglandin-endoperoxide synthase 21q25.2-q25.3Association
CV:GWAScat
CV:GWASdb
CV:PGCnp
PMID:cooccur
5997RGS2G0S8regulator of G-protein signaling 21q31CV:PGCnp
Network
PMID:cooccur
3814KISS1HH13 | KiSS-1KiSS-1 metastasis-suppressor1q32CV:PGCnp
PMID:cooccur
23236PLCB1EIEE12 | PI-PLC | PLC-154 | PLC-I | PLC-beta-1 | PLC154 | PLCB1A | PLCB1Bphospholipase C beta 120p12CV:PGCnp
CV:PheWAS
DMG:Jaffe_2016
DMG:Nishioka_2013
GSMA_I
Network
PMID:cooccur
CANABINOID
INTRACELLULAR SIGNAL TRANSDUCTION
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_mGluR5
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
Potential synaptic genes
3772KCNJ15IRKK | KIR1.3 | KIR4.2potassium voltage-gated channel subfamily J member 1521q22.2CV:PGCnp
DMG:Wockner_2014
9889ZBED4-zinc finger BED-type containing 422q13.33CV:GWASdb
CV:PGCnp
PMID:cooccur
238ALKCD246 | NBLST3anaplastic lymphoma receptor tyrosine kinase2p23Association
CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
57498KIDINS220ARMSkinase D-interacting substrate 220kDa2p24CV:GWASdb
CV:PGCnp
PMID:cooccur
INTRACELLULAR TRAFFICKING
6819SULT1C2ST1C1 | ST1C2 | SULT1C1 | humSULTC2sulfotransferase family 1C member 22q12.3CV:PGCnp
GSMA_I
GSMA_IIA
10461MERTKMER | RP38 | Tyro12 | c-Eyk | c-merMER proto-oncogene, tyrosine kinase2q14.1CV:PGCnp
GO_Annotation
GSMA_I
GSMA_IIA
PMID:cooccur
2840GPR17-G protein-coupled receptor 172q21GSMA_I
GSMA_IIA
PMID:cooccur
8942KYNUKYNUUkynureninase2q22.2CV:GWASdb
CV:PGCnp
GSMA_I
GSMA_IIA
PMID:cooccur
6091ROBO1DUTT1 | SAX3roundabout guidance receptor 13p12CV:GWASdb
CV:PGCnp
GO_Annotation
GSMA_IIA
GSMA_IIE
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
Ascano FMRP targets
9497SLC4A7NBC2 | NBC3 | NBCN1 | SBC2 | SLC4A6solute carrier family 4 member 73p22CV:PGCnp
GO_Annotation
GSMA_I
9942XYLB-xylulokinase homolog (H. influenzae)3p22-p21.3CV:PGCnp
GSMA_I
PMID:cooccur
55840EAF2BM040 | TRAITS | U19ELL associated factor 23q13.33CV:PGCnp
79782LRRC31HEL-S-293leucine rich repeat containing 313q26.2CV:PGCnp
6480ST6GAL1SIAT1 | ST6GalI | ST6NST6 beta-galactosamide alpha-2,6-sialyltranferase 13q27.3CV:PGCnp
DEG:Sanders_2013
DMG:Wockner_2014
Expression
5156PDGFRACD140A | GAS9 | PDGFR-2 | PDGFR2 | RHEPDGFRAplatelet derived growth factor receptor alpha4q12CV:GWASdb
CV:PGCnp
CV:PheWAS
DMG:Jaffe_2016
79725THAP9hTh9THAP domain containing 94q21.22CV:PGCnp
55016MARCH1MARCH-I | RNF171membrane associated ring-CH-type finger 14q32.2CV:GWASdb
CV:PGCnp
1404HAPLN1CRT1 | CRTL1hyaluronan and proteoglycan link protein 15q14.3CV:PGCnp
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
8969HIST1H2AGH2A.1b | H2A/p | H2AFP | H2AG | pH2A/fhistone cluster 1, H2ag6p22.1CV:PGCnp
DNM:Xu_2012
Expression
GSMA_I
CompositeSet
6659SOX4EVI16SRY-box 46p22.3CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_I
100129128KHDC1L-KH homology domain containing 1-like6q13CV:PGCnp
3910LAMA4CMD1JJ | LAMA3 | LAMA4*-1laminin subunit alpha 46q21CV:PGCnp
DNM:Fromer_2014
GO_Annotation
CompositeSet
5350PLNCMD1P | CMH18 | PLBphospholamban6q22.1CV:PGCnp
PMID:cooccur
5071PARK2AR-JP | LPRS2 | PDJ | PRKNparkin RBR E3 ubiquitin protein ligase6q25.2-q27CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Network
PMID:cooccur
273AMPHAMPH1amphiphysin7p14-p13CV:PGCnp
GO_Annotation
Network
PMID:cooccur
EXOCYTOSIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
CompositeSet
Darnell FMRP targets
10142AKAP9AKAP-9 | AKAP350 | AKAP450 | CG-NAP | HYPERION | LQT11 | MU-RMS-40.16A | PPP1R45 | PRKA9 | YOTIAOA-kinase anchoring protein 97q21-q22CV:GWASdb
CV:PGCnp
DNM:Fromer_2014
GO_Annotation
Network
PMID:cooccur
G2Cdb.humanNRC
CompositeSet
Darnell FMRP targets
Potential synaptic genes
11257TP53TG1LINC00096 | NCRNA00096 | P53TG1 | P53TG1-D | TP53AP1TP53 target 1 (non-protein coding)7q21.1CV:PGCnp
64816CYP3A43-cytochrome P450 family 3 subfamily A member 437q21.1CV:GWASdb
CV:PGCnp
PMID:cooccur
23554TSPAN12EVR5 | NET-2 | NET2 | TM4SF12tetraspanin 127q31.31CV:PGCnp
26047CNTNAP2AUTS15 | CASPR2 | CDFE | NRXN4 | PTHSL1contactin associated protein-like 27q35CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
5799PTPRN2IA-2beta | IAR | ICAAR | PTPRP | R-PTP-N2protein tyrosine phosphatase, receptor type N27q36CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
TYROSINE KINASE SIGNALING
CompositeSet
Darnell FMRP targets
9108MTMR7-myotubularin related protein 78p22CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
767CA8CA-VIII | CALS | CAMRQ3 | CARPcarbonic anhydrase VIII8q12.1CV:PGCnp
DMG:Nishioka_2013
4507MTAPBDMF | DMSFH | DMSMFH | HEL-249 | LGMBF | MSAP | c86fusmethylthioadenosine phosphorylase9p21CV:PGCnp
3445IFNA8IFN-alphaBinterferon, alpha 89p22CV:PGCnp
438ASMTASMTY | HIOMT | HIOMTYacetylserotonin O-methyltransferaseXp22.3 or Yp11.3GO_Annotation
PMID:cooccur
5354PLP1GPM6C | HLD1 | MMPL | PLP | PLP/DM20 | PMD | SPG2proteolipid protein 1Xq22Association
CV:PGCnp
GO_Annotation
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanARC
G2Cdb.humanNRC
CompositeSet
Darnell FMRP targets
2158F9F9 p22 | FIX | HEMB | P19 | PTC | THPH8coagulation factor IXXq27.1-q27.2CV:PGCnp
GO_Annotation
PMID:cooccur