DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
AVSSS
Uniprot ID:
P17483
Source protein:
Homeobox protein Hox-B4
Source gene:
HOXB4
Class:
DEG_SPOP_SBC_1
Location:
112:116
E3 ligase:
SPOP
DEGRON score:
0.9569
ASA_SCORE:
89.98
COIL:
0.9324
CONS_SCORE:
0.6047
DSS_SCORE:
0.6292
HELIX:
0.0658
FCONS_SCORE:
1.3683
RIG_SCORE:
0.5389
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P119Q
TCGA-05-4249
LUAD
TCGA
AVSSS
DEG_SPOP_SBC_1
0.25
p.P119Q
DO23891
LUAD
ICGC
AVSSS
DEG_SPOP_SBC_1
0.25
p.Q124H
TCGA-EE-A3AA
SKCM
TCGA
AVSSS
DEG_SPOP_SBC_1
0.1111
p.Q124H
DO37571
SKCM
ICGC
AVSSS
DEG_SPOP_SBC_1
0.1111
p.P117H
TCGA-ER-A19H
SKCM
TCGA
AVSSS
DEG_SPOP_SBC_1
0.3056
p.P117H
DO47299
SKCM
ICGC
AVSSS
DEG_SPOP_SBC_1
0.3056
p.P118L
TCGA-VQ-A8PO
STAD
TCGA
AVSSS
DEG_SPOP_SBC_1
0.2778
p.P118L
DO51773
STAD
ICGC
AVSSS
DEG_SPOP_SBC_1
0.2778
p.P118L
SIDM00658
Non-Small Cell Lung Carcinoma
GDSC
AVSSS
DEG_SPOP_SBC_1
0.2778
p.P118L
ACH-000852
Lung Cancer
CCLE
AVSSS
DEG_SPOP_SBC_1
0.2778
p.P118L
NCI-H1435
lung
COSMIC
AVSSS
DEG_SPOP_SBC_1
0.2778
p.V113A
DO22929
LIHC
ICGC
AVSSS
DEG_SPOP_SBC_1
0.5825
p.C122G
DO229253
THCA
ICGC
AVSSS
DEG_SPOP_SBC_1
0.1667
p.E105D
DO229257
THCA
ICGC
AVSSS
DEG_SPOP_SBC_1
0.1389
p.C122R
DO229201
THCA
ICGC
AVSSS
DEG_SPOP_SBC_1
0.1667
p.C110S
SIDM00845
Burkitt's Lymphoma
GDSC
AVSSS
DEG_SPOP_SBC_1
0.2778
p.C110S
SIDM01519
Head and Neck Carcinoma
GDSC
AVSSS
DEG_SPOP_SBC_1
0.2778
p.C110S
Daudi
haematopoietic_and_lymphoid_tissue
COSMIC
AVSSS
DEG_SPOP_SBC_1
0.2778
Drug responses associated with HOXB4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of AVSSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P17483
Homeobox protein Hox-B4
DEG_SPOP_SBC_1
112:116
AVSSS
SPOP
0.9569
More...
P32242
Homeobox protein OTX1
DEG_SPOP_SBC_1
131:135
AVSSS
SPOP
0.9911
More...
P34910
Protein EVI2B
DEG_SPOP_SBC_1
329:333
AVSSS
SPOP
0.9223
More...
P43358
Melanoma-associated antigen 4
DEG_SPOP_SBC_1
39:43
AVSSS
SPOP
0.8472
More...
P54278
Mismatch repair endonuclease PMS2
DEG_SPOP_SBC_1
474:478
AVSSS
SPOP
0.999
More...
P84996
Protein ALEX
DEG_SPOP_SBC_1
603:607
AVSSS
SPOP
0.9965
More...
Q06455
Protein CBFA2T1
DEG_SPOP_SBC_1
565:569
AVSSS
SPOP
0.9927
More...
Q0VDD7
Break repair meiotic recombinase recruitment factor 1
DEG_SPOP_SBC_1
66:70
AVSSS
SPOP
0.9837
More...
Q13613
Myotubularin-related protein 1
DEG_SPOP_SBC_1
643:647
AVSSS
SPOP
0.8381
More...
Q15326
Zinc finger MYND domain-containing protein 11
DEG_SPOP_SBC_1
417:421
AVSSS
SPOP
0.6553
More...
Q15714
TSC22 domain family protein 1
DEG_SPOP_SBC_1
279:283
AVSSS
SPOP
0.9984
More...
Q685J3
Mucin-17
DEG_SPOP_SBC_1
1491:1495
AVSSS
SPOP
0.9129
More...
Q685J3
Mucin-17
DEG_SPOP_SBC_1
1844:1848
AVSSS
SPOP
0.8391
More...
Q8IZA0
Dyslexia-associated protein KIAA0319-like protein
DEG_SPOP_SBC_1
173:177
AVSSS
SPOP
0.8972
More...
Q8NEY8
Periphilin-1
DEG_SPOP_SBC_1
211:215
AVSSS
SPOP
0.9988
More...
Q92562
Polyphosphoinositide phosphatase
DEG_SPOP_SBC_1
753:757
AVSSS
SPOP
0.9974
More...
Q96JE9
Microtubule-associated protein 6
DEG_SPOP_SBC_1
296:300
AVSSS
SPOP
0.8997
More...
Q99973
Telomerase protein component 1
DEG_SPOP_SBC_1
1674:1678
AVSSS
SPOP
0.8128
More...
Q9H2S1
Small conductance calcium-activated potassium channel protein 2
DEG_SPOP_SBC_1
58:62
AVSSS
SPOP
0.5155
More...
Q9HCK8
Chromodomain-helicase-DNA-binding protein 8
DEG_SPOP_SBC_1
142:146
AVSSS
SPOP
0.9881
More...
Q9NSC2
Sal-like protein 1
DEG_SPOP_SBC_1
369:373
AVSSS
SPOP
0.7672
More...
Q9ULH7
Myocardin-related transcription factor B
DEG_SPOP_SBC_1
437:441
AVSSS
SPOP
0.6865
More...
Q9UPA5
Protein bassoon
DEG_SPOP_SBC_1
3392:3396
AVSSS
SPOP
0.8731
More...
Q9Y4F4
TOG array regulator of axonemal microtubules protein 1
DEG_SPOP_SBC_1
77:81
AVSSS
SPOP
0.8214
More...
Q9Y4X4
Krueppel-like factor 12
DEG_SPOP_SBC_1
95:99
AVSSS
SPOP
0.9994
More...
Q53QW1
Testis-expressed protein 44
DEG_SPOP_SBC_1
36:40
AVSSS
SPOP
0.9324
More...
Q96PX9
Pleckstrin homology domain-containing family G member 4B
DEG_SPOP_SBC_1
1174:1178
AVSSS
SPOP
0.7969
More...
P43359
Putative melanoma-associated antigen 5P
DEG_SPOP_SBC_1
38:42
AVSSS
SPOP
0.8963
More...
Q6ZRI6
Uncharacterized protein C15orf39
DEG_SPOP_SBC_1
934:938
AVSSS
SPOP
0.9935
More...
Q8IW70
Transmembrane protein 151B
DEG_SPOP_SBC_1
439:443
AVSSS
SPOP
0.8829
More...
Q8TCN5
Zinc finger protein 507
DEG_SPOP_SBC_1
860:864
AVSSS
SPOP
0.8942
More...
Q9P2C4
Transmembrane protein 181
DEG_SPOP_SBC_1
25:29
AVSSS
SPOP
0.8665
More...
Q5U5X8
Protein FAM222A
DEG_SPOP_SBC_1
109:113
AVSSS
SPOP
0.9845
More...
Q68D20
Protein PMS2CL
DEG_SPOP_SBC_1
88:92
AVSSS
SPOP
0.7454
More...
Q9NQ32
Uncharacterized protein C11orf16
DEG_SPOP_SBC_1
333:337
AVSSS
SPOP
0.8372
More...