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| Gene ID | Symbol | Synonyms | Official Full Name | Location | SZ group ? | Functional group ? |
|---|---|---|---|---|---|---|
| 5080 | PAX6 | AN | AN2 | D11S812E | FVH1 | MGDA | WAGR | paired box 6 | 11p13 | Association CV:PGCnp DMG:Jaffe_2016 DMG:Wockner_2014 GO_Annotation PMID:cooccur | |
| 10553 | HTATIP2 | CC3 | SDR44U1 | TIP30 | HIV-1 Tat interactive protein 2 | 11p15.1 | CV:PGCnp DMG:Wockner_2014 PMID:cooccur | |
| 6749 | SSRP1 | FACT | FACT80 | T160 | structure specific recognition protein 1 | 11q12 | CV:PGCnp DMG:vanEijk_2014 | Ascano FMRP targets Chromatin Remodeling Genes |
| 2120 | ETV6 | TEL | TEL/ABL | THC5 | ETS variant 6 | 12p13 | CV:GWASdb CV:PGCnp DMG:Nishioka_2013 | |
| 22877 | MLXIP | MIR | MONDOA | bHLHe36 | MLX interacting protein | 12q24.31 | CV:PGCnp DMG:Montano_2016 | |
| 688 | KLF5 | BTEB2 | CKLF | IKLF | Kruppel-like factor 5 (intestinal) | 13q22.1 | Association CV:PGCnp PMID:cooccur | |
| 7027 | TFDP1 | DILC | DP1 | DRTF1 | Dp-1 | transcription factor Dp-1 | 13q34 | CV:PGCnp DMG:Wockner_2014 | |
| 2290 | FOXG1 | BF1 | BF2 | FHKL3 | FKH2 | FKHL1 | FKHL2 | FKHL3 | FKHL4 | FOXG1A | FOXG1B | FOXG1C | HBF-1 | HBF-2 | HBF-3 | HBF-G2 | HBF2 | HFK1 | HFK2 | HFK3 | KHL2 | QIN | forkhead box G1 | 14q13 | DMG:Jaffe_2016 GO_Annotation GSMA_I PMID:cooccur | |
| 11169 | WDHD1 | AND-1 | AND1 | CHTF4 | CTF4 | WD repeat and HMG-box DNA binding protein 1 | 14q22.2 | CV:PGCnp | Ascano FMRP targets |
| 3091 | HIF1A | HIF-1-alpha | HIF-1A | HIF-1alpha | HIF1 | HIF1-ALPHA | MOP1 | PASD8 | bHLHe78 | hypoxia inducible factor 1 alpha subunit | 14q23.2 | CV:PGCnp DNM:Gulsuner_2013 PMID:cooccur | |
| 64919 | BCL11B | ATL1 | ATL1-alpha | ATL1-beta | ATL1-delta | ATL1-gamma | CTIP-2 | CTIP2 | RIT1 | ZNF856B | hRIT1-alpha | B-cell CLL/lymphoma 11B | 14q32.2 | CV:GWAScat CV:PGC128 CV:PGCnp DMG:Wockner_2014 | |
| 865 | CBFB | PEBP2B | core-binding factor, beta subunit | 16q22.1 | CV:PGCnp DMG:Wockner_2014 | |
| 10514 | MYBBP1A | P160 | PAP2 | MYB binding protein (P160) 1a | 17p13.3 | CV:PGCnp | Ascano FMRP targets |
| 6662 | SOX9 | CMD1 | CMPD1 | SRA1 | SRXX2 | SRXY10 | SRY-box 9 | 17q24.3 | CV:PGCnp PMID:cooccur | |
| 3607 | FOXK2 | ILF | ILF-1 | ILF1 | forkhead box K2 | 17q25 | CV:PGCnp DMG:Wockner_2014 | CompositeSet Darnell FMRP targets Ascano FMRP targets |
| 2627 | GATA6 | - | GATA binding protein 6 | 18q11.1-q11.2 | CV:PGCnp DMG:Jaffe_2016 DMG:Wockner_2014 | |
| 54815 | GATAD2A | p66alpha | GATA zinc finger domain containing 2A | 19p13.11 | CV:GWAScat CV:GWASdb CV:PGC128 CV:PGCnp CV:Ripke_2013 DMG:Wockner_2014 LK:YES | |
| 811 | CALR | CRT | HEL-S-99n | RO | SSA | cC1qR | calreticulin | 19p13.13 | CV:PGCnp PMID:cooccur | INTRACELLULAR SIGNAL TRANSDUCTION |
| 6597 | SMARCA4 | BAF190 | BAF190A | BRG1 | MRD16 | RTPS2 | SNF2 | SNF2L4 | SNF2LB | SWI2 | hSNF2b | SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 | 19p13.2 | CV:PGCnp DMG:Nishioka_2013 DMG:vanEijk_2014 GO_Annotation Network PMID:cooccur | CompositeSet Darnell FMRP targets Ascano FMRP targets Chromatin Remodeling Genes |
| 1054 | CEBPG | GPE1BP | IG/EBP-1 | CCAAT/enhancer binding protein gamma | 19q13.11 | CV:PGCnp | |
| 6829 | SUPT5H | SPT5 | SPT5H | Tat-CT1 | SPT5 homolog, DSIF elongation factor subunit | 19q13.2 | CV:PGCnp DMG:Jaffe_2016 | |
| 5971 | RELB | I-REL | IREL | REL-B | v-rel avian reticuloendotheliosis viral oncogene homolog B | 19q13.32 | CV:PGCnp GO_Annotation Network | |
| 6689 | SPIB | SPI-B | Spi-B transcription factor | 19q13.33 | CV:PGCnp DNM:Xu_2012 | CompositeSet |
| 1810 | DR1 | NC2 | NC2-BETA | NC2B | down-regulator of transcription 1 | 1p22.1 | CV:PGCnp Expression PMID:cooccur | |
| 8543 | LMO4 | - | LIM domain only 4 | 1p22.3 | CV:PGCnp DMG:Jaffe_2016 DMG:Nishioka_2013 PMID:cooccur | |
| 112950 | MED8 | ARC32 | mediator complex subunit 8 | 1p34.2 | CV:PGCnp | |
| 864 | RUNX3 | AML2 | CBFA3 | PEBP2aC | runt related transcription factor 3 | 1p36 | CV:PGCnp DMG:vanEijk_2014 DNM:Gulsuner_2013 | |
| 23028 | KDM1A | AOF2 | BHC110 | CPRF | KDM1 | LSD1 | lysine demethylase 1A | 1p36.12 | CV:PGCnp PMID:cooccur | Ascano FMRP targets Chromatin Remodeling Genes |
| 5933 | RBL1 | CP107 | PRB1 | p107 | retinoblastoma-like 1 | 20q11.2 | CV:PGCnp DMG:Jaffe_2016 | |
| 60436 | TGIF2 | - | TGFB induced factor homeobox 2 | 20q11.23 | CV:PGCnp DMG:Wockner_2014 | |
| 7022 | TFAP2C | AP2-GAMMA | ERF1 | TFAP2G | hAP-2g | transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma) | 20q13.2 | CV:PGCnp DMG:Wockner_2014 | |
| 6663 | SOX10 | DOM | PCWH | WS2E | WS4 | WS4C | SRY-box 10 | 22q13.1 | Association DEG:Zhao_2015 DMG:Wockner_2014 GO_Annotation GR_COR GR_Ng GR_WM PMID:cooccur | |
| 468 | ATF4 | CREB-2 | CREB2 | TAXREB67 | TXREB | activating transcription factor 4 | 22q13.1 | CV:PGCnp PMID:cooccur | |
| 6942 | TCF20 | AR1 | SPBP | TCF-20 | transcription factor 20 (AR1) | 22q13.3|22q13.3 | CV:GWAScat CV:GWASdb CV:PGC128 CV:PGCnp | CompositeSet Darnell FMRP targets |
| 83439 | TCF7L1 | TCF-3 | TCF3 | transcription factor 7 like 1 | 2p11.2 | CV:PGCnp DMG:Nishioka_2013 DMG:Wockner_2014 GSMA_I | |
| 53335 | BCL11A | BCL11A-L | BCL11A-S | BCL11A-XL | BCL11a-M | CTIP1 | EVI9 | HBFQTL5 | ZNF856 | B-cell CLL/lymphoma 11A | 2p16.1 | CV:GWASdb CV:PGCnp PMID:cooccur | |
| 2976 | GTF3C2 | TFIIIC-BETA | TFIIIC110 | general transcription factor IIIC subunit 2 | 2p23.3 | CV:PGCnp DNM:Fromer_2014 | CompositeSet Darnell FMRP targets |
| 6664 | SOX11 | MRD27 | SRY-box 11 | 2p25 | CV:PGCnp GO_Annotation PMID:cooccur | |
| 29842 | TFCP2L1 | CRTR1 | LBP-9 | LBP9 | transcription factor CP2-like 1 | 2q14 | CV:PGCnp DNM:McCarthy_2014 Expression GSMA_I GSMA_IIA | |
| 2019 | EN1 | - | engrailed homeobox 1 | 2q14.2 | CV:GWASdb CV:PGCnp DMG:Jaffe_2016 GO_Annotation GSMA_I GSMA_IIA PMID:cooccur | |
| 9111 | NMI | - | N-myc and STAT interactor | 2q23 | CV:PGCnp GSMA_IIA PMID:cooccur | |
| 6772 | STAT1 | CANDF7 | IMD31A | IMD31B | IMD31C | ISGF-3 | STAT91 | signal transducer and activator of transcription 1 | 2q32.2 | CV:PGCnp Network PMID:cooccur | G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL G2Cdb.humanPSD G2Cdb.humanPSP |
| 9686 | VGLL4 | VGL-4 | vestigial like family member 4 | 3p25.3 | CV:GWASdb CV:PGCnp DMG:Jaffe_2016 DMG:vanEijk_2014 DMG:Wockner_2014 GSMA_I PMID:cooccur | |
| 25937 | WWTR1 | TAZ | WW domain containing transcription regulator 1 | 3q23-q24 | CV:PGCnp | |
| 7545 | ZIC1 | CRS6 | ZIC | ZNF201 | Zic family member 1 | 3q24 | CV:PGCnp DMG:Wockner_2014 GO_Annotation PMID:cooccur | |
| 55689 | YEATS2 | - | YEATS domain containing 2 | 3q27.1 | CV:GWASdb CV:PGCnp DMG:Jaffe_2016 | |
| 7468 | WHSC1 | MMSET | NSD2 | REIIBP | TRX5 | WHS | Wolf-Hirschhorn syndrome candidate 1 | 4p16.3 | CV:PGCnp DMG:Wockner_2014 | Chromatin Remodeling Genes |
| 3148 | HMGB2 | HMG2 | high mobility group box 2 | 4q31 | CV:PGCnp DMG:Nishioka_2013 DMG:vanEijk_2014 PMID:cooccur | |
| 8819 | SAP30 | - | Sin3A associated protein 30kDa | 4q34.1 | CV:PGCnp DEG:Maycox_2009 | |
| 3659 | IRF1 | IRF-1 | MAR | interferon regulatory factor 1 | 5q31.1 | CV:PGCnp DMG:Jaffe_2016 GSMA_I | |
| 3159 | HMGA1 | HMG-R | HMGA1A | HMGIY | high mobility group AT-hook 1 | 6p21 | CV:GWASdb CV:PGCnp DMG:Jaffe_2016 GSMA_I GSMA_IIE | |
| 4794 | NFKBIE | IKBE | NFKB inhibitor epsilon | 6p21.1 | CV:PGCnp GSMA_IIE Network | G2Cdb.humanPSD G2Cdb.humanPSP |
| 6722 | SRF | MCM1 | serum response factor | 6p21.1 | CV:PGCnp DMG:Nishioka_2013 GSMA_IIE PMID:cooccur | |
| 2968 | GTF2H4 | P52 | TFB2 | TFIIH | general transcription factor IIH subunit 4 | 6p21.3 | CV:PGCnp DMG:Jaffe_2016 GSMA_I | |
| 1871 | E2F3 | E2F-3 | E2F transcription factor 3 | 6p22 | CV:PGCnp DMG:Jaffe_2016 GSMA_I | |
| 6659 | SOX4 | EVI16 | SRY-box 4 | 6p22.3 | CV:PGCnp DMG:Jaffe_2016 DMG:Wockner_2014 GSMA_I | |
| 7913 | DEK | D6S231E | DEK proto-oncogene | 6p22.3 | CV:PGCnp DMG:Wockner_2014 GSMA_I PMID:cooccur | |
| 3400 | ID4 | IDB4 | bHLHb27 | inhibitor of DNA binding 4, HLH protein | 6p22.3 | CV:GWASdb CV:PGCnp DMG:Jaffe_2016 GO_Annotation GSMA_I | |
| 3096 | HIVEP1 | CIRIP | CRYBP1 | GAAP | MBP-1 | PRDII-BF1 | Schnurri-1 | ZAS1 | ZNF40 | ZNF40A | human immunodeficiency virus type I enhancer binding protein 1 | 6p24-p22.3 | CV:PGCnp DMG:Wockner_2014 DNM:Gulsuner_2013 GSMA_I | CompositeSet Darnell FMRP targets |
| 2296 | FOXC1 | ARA | FKHL7 | FREAC-3 | FREAC3 | IGDA | IHG1 | IRID1 | RIEG3 | forkhead box C1 | 6p25 | CV:PGCnp DMG:Jaffe_2016 GO_Annotation GSMA_I PMID:cooccur | |
| 10957 | PNRC1 | B4-2 | PNAS-145 | PROL2 | PRR2 | proline rich nuclear receptor coactivator 1 | 6q15 | CV:GWASdb CV:PGCnp | |
| 3066 | HDAC2 | HD2 | RPD3 | YAF1 | histone deacetylase 2 | 6q21 | DMG:Wockner_2014 Network PMID:cooccur | Chromatin Remodeling Genes |
| 2146 | EZH2 | ENX-1 | ENX1 | EZH1 | EZH2b | KMT6 | KMT6A | WVS | WVS2 | enhancer of zeste 2 polycomb repressive complex 2 subunit | 7q35-q36 | CV:PGCnp DMG:Wockner_2014 Network | Chromatin Remodeling Genes |
| 4609 | MYC | MRTL | MYCC | bHLHe39 | c-Myc | v-myc avian myelocytomatosis viral oncogene homolog | 8q24.21 | CV:PGCnp DMG:Jaffe_2016 Expression Network PMID:cooccur | |
| 3297 | HSF1 | HSTF1 | heat shock transcription factor 1 | 8q24.3 | CV:PGCnp PMID:cooccur | |
| 4781 | NFIB | CTF | HMGIC/NFIB | NF-I/B | NF1-B | NFI-B | NFI-RED | NFIB2 | NFIB3 | nuclear factor I/B | 9p24.1 | CV:PGCnp DMG:Jaffe_2016 DMG:Wockner_2014 PMID:cooccur | |
| 1761 | DMRT1 | CT154 | DMT1 | doublesex and mab-3 related transcription factor 1 | 9p24.3 | CV:PGCnp PMID:cooccur | |
| 7088 | TLE1 | ESG | ESG1 | GRG1 | transducin like enhancer of split 1 | 9q21.32 | CV:PGCnp DMG:Wockner_2014 PMID:cooccur | Ascano FMRP targets |