Gene Set: 173 by Ng et al.


     Gene set description
  • Name: 173 by Ng et al.
  • Method: Gene ranking
  • Number of genes: 173
  • Reference: Sun et al. (2009) Bioinformatics: accepted with minor revision
  • Summary: This dataset is generated using the same approach as in the 160 by Lewis et al. dataset. By searching for the optimal weight matrix to combine the 4 datasets, we prioritized 173 genes using the recently released new meta-analysis results in Ng et al. (2009). 
     Gene List

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Gene ID Symbol Official Full Name Location
4853NOTCH2Notch homolog 2 (Drosophila)1p13-p11
2944GSTM1glutathione S-transferase mu 11p13.3
22854NTNG1netrin G11p13.3
5142PDE4Bphosphodiesterase 4B, cAMP-specific (phosphodiesterase E4 dunce homolog, Drosophila)1p31
2899GRIK3glutamate receptor, ionotropic, kainate 31p34-p33
4524MTHFR5,10-methylenetetrahydrofolate reductase (NADPH)1p36.3
405ARNTaryl hydrocarbon receptor nuclear translocator1q21
6271S100A1S100 calcium binding protein A11q21
6281S100A10S100 calcium binding protein A101q21
9826ARHGEF11Rho guanine nucleotide exchange factor (GEF) 111q21
10712C1orf2chromosome 1 open reading frame 21q21
2532DARCDuffy blood group, chemokine receptor1q21-q22
8991SELENBP1selenium binding protein 11q21-q22
1401CRPC-reactive protein, pentraxin-related1q21-q23
2703GJA8gap junction protein, alpha 8, 50kDa1q21.1
10628TXNIPthioredoxin interacting protein1q21.1
2029ENSAendosulfine alpha1q21.2
23208SYT11synaptotagmin XI1q21.2
1141CHRNB2cholinergic receptor, nicotinic, beta 2 (neuronal)1q21.3
3782KCNN3potassium intermediate/small conductance calcium-activated channel, subfamily N, member 31q21.3
126669SHESrc homology 2 domain containing E1q21.3
4332MNDAmyeloid cell nuclear differentiation antigen1q22
10763NESnestin1q23.1
5999RGS4regulator of G-protein signaling 41q23.3
9722NOS1APnitric oxide synthase 1 (neuronal) adaptor protein1q23.3
127933UHMK1U2AF homology motif (UHM) kinase 11q23.3
5321PLA2G4Aphospholipase A2, group IVA (cytosolic, calcium-dependent)1q25
63827BCANbrevican1q31
3586IL10interleukin 101q31-q32
1116CHI3L1chitinase 3-like 1 (cartilage glycoprotein-39)1q32.1
5362PLXNA2plexin A21q32.2
8564KMOkynurenine 3-monooxygenase (kynurenine 3-hydroxylase)1q42-q44
7257TSNAXtranslin-associated factor X1q42.1
27185DISC1disrupted in schizophrenia 11q42.1
5305PIP4K2Aphosphatidylinositol-5-phosphate 4-kinase, type II, alpha10p12.2
1103CHATcholine acetyltransferase10q11.2
2894GRID1glutamate receptor, ionotropic, delta 110q22
355FASFas (TNF receptor superfamily, member 6)10q24.1
6571SLC18A2solute carrier family 18 (vesicular monoamine), member 210q25
627BDNFbrain-derived neurotrophic factor11p13
6506SLC1A2solute carrier family 1 (glial high affinity glutamate transporter), member 211p13-p12
7166TPH1tryptophan hydroxylase 111p15.3-p14
1815DRD4dopamine receptor D411p15.5
7054THtyrosine hydroxylase11p15.5
1813DRD2dopamine receptor D211q23
3359HTR3A5-hydroxytryptamine (serotonin) receptor 3A11q23.1
4900NRGNneurogranin (protein kinase C substrate, RC3)11q24
2904GRIN2Bglutamate receptor, ionotropic, N-methyl D-aspartate 2B12p12
4908NTF3neurotrophin 312p13
2065ERBB3v-erb-b2 erythroblastic leukemia viral oncogene homolog 3 (avian)12q13
1610DAOD-amino-acid oxidase12q24
4842NOS1nitric oxide synthase 1 (neuronal)12q24.2-q24.31
3356HTR2A5-hydroxytryptamine (serotonin) receptor 2A13q14-q21
3843IPO5importin 513q32.2
267012DAOAD-amino acid oxidase activator13q33.2|13q34
64067NPAS3neuronal PAS domain protein 314q12-q13
1113CHGAchromogranin A (parathyroid secretory protein 1)14q32
207AKT1v-akt murine thymoma viral oncogene homolog 114q32.32|14q32.32
89832CHRFAM7ACHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion15q13.1
1139CHRNA7cholinergic receptor, nicotinic, alpha 715q14
1544CYP1A2cytochrome P450, family 1, subfamily A, polypeptide 215q24.1
3240HPhaptoglobin16q22.1
7157TP53tumor protein p5317p13.1
6532SLC6A4solute carrier family 6 (neurotransmitter transporter, serotonin), member 417q11.1-q12
718C3complement component 319p13.3-p13.2
9253NUMBLnumb homolog (Drosophila)-like19q13.13-q13.2
348APOEapolipoprotein E19q13.2
8685MARCOmacrophage receptor with collagenous structure2q12-q13
1622DBIdiazepam binding inhibitor (GABA receptor modulator, acyl-Coenzyme A binding protein)2q12-q21
4867NPHP1nephronophthisis 1 (juvenile)2q13
7851MALLmal, T-cell differentiation protein-like2q13
150465TTLtubulin tyrosine ligase2q13
5624PROCprotein C (inactivator of coagulation factors Va and VIIIa)2q13-q14
3553IL1Binterleukin 1, beta2q14
51141INSIG2insulin induced gene 22q14.1
3557IL1RNinterleukin 1 receptor antagonist2q14.2
4929NR4A2nuclear receptor subfamily 4, group A, member 22q22-q23
2571GAD1glutamate decarboxylase 1 (brain, 67kDa)2q31
3623INHAinhibin, alpha2q33-q36
130749CPOcarboxypeptidase O2q33.3
2066ERBB4v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)2q33.3-q34
2335FN1fibronectin 12q34
4133MAP2microtubule-associated protein 22q34-q35
1674DESdesmin2q35
3577IL8RAinterleukin 8 receptor, alpha2q35
79137FAM134Afamily with sequence similarity 134, member A2q35
7857SCG2secretogranin II (chromogranin C)2q35-q36
1114CHGBchromogranin B (secretogranin 1)20pter-p12
2937GSSglutathione synthetase20q11.2
10215OLIG2oligodendrocyte lineage transcription factor 221q22.11
54584GNB1Lguanine nucleotide binding protein (G protein), beta polypeptide 1-like22q11.2
5625PRODHproline dehydrogenase (oxidase) 122q11.21
6899TBX1T-box 122q11.21
7122CLDN5claudin 522q11.21
9993DGCR2DiGeorge syndrome critical region gene 222q11.21
29801ZDHHC8zinc finger, DHHC-type containing 822q11.21
1312COMTcatechol-O-methyltransferase22q11.21-q11.23|22q11.21
7494XBP1X-box binding protein 122q12.1|22q12
7533YWHAHtyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide22q12.3
1439CSF2RBcolony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage)22q13.1

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