DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PPTY
Uniprot ID:
Q9BQI5
Source protein:
SH3-containing GRB2-like protein 3-interacting protein 1
Source gene:
SGIP1
Class:
ITCH
Location:
416:419
E3 ligase:
ITCH,NEDD4
DEGRON score:
0.9553
ASA_SCORE:
94.45
COIL:
0.651
CONS_SCORE:
0.3728
DSS_SCORE:
0.7909
HELIX:
0.3405
FCONS_SCORE:
1.0806
RIG_SCORE:
0.5953
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V422L
TCGA-39-5011
LUSC
TCGA
PPTY
ITCH
0.25
p.A409T
TCGA-77-8148
LUSC
TCGA
PPTY
ITCH
0.1389
p.A409E
TCGA-91-6840
LUAD
TCGA
PPTY
ITCH
0.1389
p.P414L
TCGA-AC-A5XS
BRCA
TCGA
PPTY
ITCH
0.2778
p.G427E
TCGA-AP-A1DV
UCEC
TCGA
PPTY
ITCH
0.1111
p.R408S
TCGA-FJ-A3ZE
BLCA
TCGA
PPTY
ITCH
0.1111
p.S424L
TCGA-FS-A4FC
SKCM
TCGA
PPTY
ITCH
0.1944
p.G406R
TCGA-G4-6320
COAD
TCGA
PPTY
ITCH
0.0556
p.R412S
DO484
BLCA
ICGC
PPTY
ITCH
0.2222
p.S428L
DO228452
BRCA
ICGC
PPTY
ITCH
0.0833
p.S428L
DO37762
SKCM
ICGC
PPTY
ITCH
0.0833
p.P418L
DO50023
BRCA
ICGC
PPTY
ITCH
0.7582
p.G410R
DO8159
COAD
ICGC
PPTY
ITCH
0.6111
p.P416T
DO222677
ESCA
ICGC
PPTY
ITCH
0.7031
p.A413V
DO228807
LICA
ICGC
PPTY
ITCH
0.25
p.D406H
DO23774
LUAD
ICGC
PPTY
ITCH
0.0556
p.A413E
DO23608
LUAD
ICGC
PPTY
ITCH
0.25
p.A413T
DO26458
LUSC
ICGC
PPTY
ITCH
0.25
p.V426L
DO27532
LUSC
ICGC
PPTY
ITCH
0.1389
p.T425I
DO228338
MALY
ICGC
PPTY
ITCH
0.1667
p.T425I
DG-75
haematopoietic_and_lymphoid_tissue
COSMIC
PPTY
ITCH
0.1667
p.R408I
SIDM00151
Ovarian Carcinoma
GDSC
PPTY
ITCH
0.1111
p.R408I
ACH-000966
Ovarian Cancer
CCLE
PPTY
ITCH
0.1111
p.R408I
IGROV-1
ovary
COSMIC
PPTY
ITCH
0.1111
p.T421I
SIDM00948
Burkitt's Lymphoma
GDSC
PPTY
ITCH
0.2778
p.T421I
ACH-002232
Lymphoma
CCLE
PPTY
ITCH
0.2778
p.T421I
DG-75
haematopoietic_and_lymphoid_tissue
COSMIC
PPTY
ITCH
0.2778
p.R412I
IGROV-1
ovary
COSMIC
PPTY
ITCH
0.2222
p.L424I
COR-L321
NS
COSMIC
PPTY
ITCH
0.1944
p.F407C
Daudi
haematopoietic_and_lymphoid_tissue
COSMIC
PPTY
ITCH
0.0833
p.D406E
Daudi
haematopoietic_and_lymphoid_tissue
COSMIC
PPTY
ITCH
0.0556
p.P409Q
NCI-H1975
lung
COSMIC
PPTY
ITCH
0.1389
Drug responses associated with SGIP1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PPTY
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A4UGR9
Xin actin-binding repeat-containing protein 2
ITCH
3280:3283
PPTY
ITCH,NEDD4
0.9968
More...
O14514
Adhesion G protein-coupled receptor B1
ITCH
628:631
PPTY
ITCH,NEDD4
0.9223
More...
O14578
Citron Rho-interacting kinase
ITCH
1926:1929
PPTY
ITCH,NEDD4
0.5412
More...
O14686
Histone-lysine N-methyltransferase 2D
ITCH
2193:2196
PPTY
ITCH,NEDD4
0.9967
More...
O15165
Low-density lipoprotein receptor class A domain-containing protein 4
ITCH
252:255
PPTY
ITCH,NEDD4
0.9918
More...
O15357
Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2
ITCH
658:661
PPTY
ITCH,NEDD4
0.6551
More...
O75175
CCR4-NOT transcription complex subunit 3
ITCH
320:323
PPTY
ITCH,NEDD4
0.7287
More...
O75909
Cyclin-K
ITCH
510:513
PPTY
ITCH,NEDD4
0.7979
More...
P21796
Voltage-dependent anion-selective channel protein 1
ITCH
4:7
PPTY
ITCH,NEDD4
0.5246
More...
P23759
Paired box protein Pax-7
ITCH
444:447
PPTY
ITCH,NEDD4
0.9893
More...
P23760
Paired box protein Pax-3
ITCH
450:453
PPTY
ITCH,NEDD4
0.9541
More...
P25391
Laminin subunit alpha-1
ITCH
171:174
PPTY
ITCH,NEDD4
0.9366
More...
P82650
28S ribosomal protein S22, mitochondrial
ITCH
100:103
PPTY
ITCH,NEDD4
0.9899
More...
Q00341
Vigilin
ITCH
37:40
PPTY
ITCH,NEDD4
0.6855
More...
Q01892
Transcription factor Spi-B
ITCH
80:83
PPTY
ITCH,NEDD4
0.9975
More...
Q12824
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
ITCH
116:119
PPTY
ITCH,NEDD4
0.9984
More...
Q13459
Unconventional myosin-IXb
ITCH
2143:2146
PPTY
ITCH,NEDD4
0.9285
More...
Q68CP9
AT-rich interactive domain-containing protein 2
ITCH
1581:1584
PPTY
ITCH,NEDD4
0.9943
More...
Q7Z478
ATP-dependent RNA helicase DHX29
ITCH
459:462
PPTY
ITCH,NEDD4
0.8751
More...
Q86U70
LIM domain-binding protein 1
ITCH
49:52
PPTY
ITCH,NEDD4
0.9966
More...
Q8IXZ2
Zinc finger CCCH domain-containing protein 3
ITCH
41:44
PPTY
ITCH,NEDD4
0.9955
More...
Q92540
Nonsense-mediated mRNA decay factor SMG7
ITCH
666:669
PPTY
ITCH,NEDD4
0.8045
More...
Q92859
Neogenin
ITCH
1372:1375
PPTY
ITCH,NEDD4
0.9601
More...
Q93050
V-type proton ATPase 116 kDa subunit a 1
ITCH
361:364
PPTY
ITCH,NEDD4
0.9108
More...
Q969W9
Protein TMEPAI
ITCH
229:232
PPTY
ITCH,NEDD4
0.9995
More...
Q9BQI5
SH3-containing GRB2-like protein 3-interacting protein 1
ITCH
416:419
PPTY
ITCH,NEDD4
0.9553
More...
Q9BRG2
SH2 domain-containing protein 3A
ITCH
228:231
PPTY
ITCH,NEDD4
0.9875
More...
Q9BSA4
Protein tweety homolog 2
ITCH
506:509
PPTY
ITCH,NEDD4
0.9004
More...
Q9BT40
Inositol polyphosphate 5-phosphatase K
ITCH
244:247
PPTY
ITCH,NEDD4
0.9245
More...
Q9H3M7
Thioredoxin-interacting protein
ITCH
375:378
PPTY
ITCH,NEDD4
0.9994
More...
Q9H6T0
Epithelial splicing regulatory protein 2
ITCH
584:587
PPTY
ITCH,NEDD4
0.9502
More...
Q9NYQ8
Protocadherin Fat 2
ITCH
4182:4185
PPTY
ITCH,NEDD4
0.9282
More...
Q9P2K8
eIF-2-alpha kinase GCN2
ITCH
80:83
PPTY
ITCH,NEDD4
0.7591
More...
Q9UJQ4
Sal-like protein 4
ITCH
833:836
PPTY
ITCH,NEDD4
0.9797
More...
Q9UPA5
Protein bassoon
ITCH
1952:1955
PPTY
ITCH,NEDD4
0.8543
More...
Q9Y6I3
Epsin-1
ITCH
545:548
PPTY
ITCH,NEDD4
0.7626
More...
O14668
Transmembrane gamma-carboxyglutamic acid protein 1
ITCH
169:172
PPTY
ITCH,NEDD4
0.998
More...
Q5JSZ5
Protein PRRC2B
ITCH
275:278
PPTY
ITCH,NEDD4
0.8146
More...
Q9UKU9
Angiopoietin-related protein 2
ITCH
227:230
PPTY
ITCH,NEDD4
0.7151
More...
Q96K62
Zinc finger and BTB domain-containing protein 45
ITCH
400:403
PPTY
ITCH,NEDD4
0.7412
More...
A6NMK8
Protein INSYN2B
ITCH
76:79
PPTY
ITCH,NEDD4
0.8124
More...