Search results: The pahtway p3309 has 206 genes in the original annotation. Currently, there are 117 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group ? Functional group ?
8829NRP1BDCA4 | CD304 | NP1 | NRP | VEGF165Rneuropilin 110p12CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
Ascano FMRP targets
6832SUPV3L1SUV3Suv3 like RNA helicase10q22.1CV:PGCnp
DMG:Nishioka_2013
4791NFKB2CVID10 | H2TF1 | LYT-10 | LYT10 | NF-kB2 | p100 | p49/p100 | p52nuclear factor of kappa light polypeptide gene enhancer in B-cells 210q24CV:PGCnp
DMG:Nishioka_2013
GO_Annotation
Network
56652C10orf2ATXN8 | IOSCA | MTDPS7 | PEO | PEO1 | PEOA3 | PRLTS5 | SANDO | SCA8 | TWINLchromosome 10 open reading frame 210q24CV:PGCnp
9221NOLC1NOPP130 | NOPP140 | NS5ATP13 | P130nucleolar and coiled-body phosphoprotein 110q24.32CV:PGCnp
DMG:Jaffe_2016
406ARNTLBMAL1 | BMAL1c | JAP3 | MOP3 | PASD3 | TIC | bHLHe5aryl hydrocarbon receptor nuclear translocator like11p15CV:GWAScat
CV:GWASdb
CV:PGCnp
PMID:cooccur
79026AHNAKAHNAKRSAHNAK nucleoprotein11q12.2CV:PGCnp
DMG:Nishioka_2013
DMG:vanEijk_2014
DMG:Wockner_2014
GO_Annotation
CompositeSet
Ascano FMRP targets
79080CCDC86-coiled-coil domain containing 8611q12.2CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
54663WDR74-WD repeat domain 7411q12.3CV:PGCnp
DMG:Wockner_2014
3177SLC29A2DER12 | ENT2 | HNP36solute carrier family 29 member 211q13CV:PGCnp
23201FAM168AKIAA0280 | TCRP1family with sequence similarity 168 member A11q13.4CV:PGCnp
5091PCPCBpyruvate carboxylase11q13.4-q13.5CV:PGCnp
PMID:cooccur
G2Cdb.human_mitochondria
G2Cdb.humanPSD
G2Cdb.humanPSP
1662DDX10HRH-J8DEAD-box helicase 1011q22-q23CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DNM:Xu_2012
GSMA_I
CompositeSet
Ascano FMRP targets
6653SORL1C11orf32 | LR11 | LRP9 | SORLA | SorLA-1 | gp250sortilin-related receptor, L(DLR class) A repeats containing11q23.2-q24.2CV:PGCnp
DMG:Montano_2016
GSMA_I
PMID:cooccur
CompositeSet
Darnell FMRP targets
170689ADAMTS15-ADAM metallopeptidase with thrombospondin type 1 motif 1511q25CV:PGCnp
DMG:Jaffe_2016
6843VAMP1SPAX1 | SYB1 | VAMP-1vesicle associated membrane protein 112pCV:PGCnp
DMG:Nishioka_2013
GO_Annotation
PMID:cooccur
EXOCYTOSIS
SEROTONIN
Potential synaptic genes
2012EMP1CL-20 | EMP-1 | TMPepithelial membrane protein 112p12.3CV:PGCnp
DMG:Wockner_2014
9052GPRC5AGPCR5A | PEIG-1 | RAI3 | RAIG1 | TIG1G protein-coupled receptor class C group 5 member A12p13.1CV:PGCnp
DMG:Jaffe_2016
4234METTL1C12orf1 | TRM8 | TRMT8 | YDL201wmethyltransferase like 112q13Network
2065ERBB3ErbB-3 | HER3 | LCCS2 | MDA-BF-1 | c-erbB-3 | c-erbB3 | erbB3-S | p180-ErbB3 | p45-sErbB3 | p85-sErbB3erb-b2 receptor tyrosine kinase 312q13Association
CV:PGCnp
GO_Annotation
GR_COR
GR_Ng
GR_WM
Network
PMID:cooccur
5036PA2G4EBP1 | HG4-1 | p38-2G4proliferation-associated 2G412q13.2CV:PGCnp
DMG:Wockner_2014
Network
1019CDK4CMM3 | PSK-J3cyclin-dependent kinase 412q14CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
Network
PMID:cooccur
26277TINF2DKCA3 | TIN2TERF1 (TRF1)-interacting nuclear factor 214q12CV:PGCnp
DNM:Fromer_2014
GSMA_I
CompositeSet
26094DCAF4WDR21 | WDR21ADDB1 and CUL4 associated factor 414q24.3CV:PGCnp
DMG:Wockner_2014
55384MEG3FP504 | GTL2 | LINC00023 | NCRNA00023 | PRO0518 | PRO2160 | onco-lncRNA-83 | prebp1maternally expressed 3 (non-protein coding)14q32CV:PGCnp
DMG:Wockner_2014
Expression
7127TNFAIP2B94 | EXOC3L3TNF alpha induced protein 214q32CV:PGCnp
DEG:Zhao_2015
6652SORDHEL-S-95n | SORD1sorbitol dehydrogenase15q15.3CV:PGCnp
DMG:Wockner_2014
83719YPEL3-yippee like 316p11.2CNV:YES
CV:PGCnp
DMG:Wockner_2014
GSMA_IIE
54820NDE1HOM-TES-87 | LIS4 | MHAC | NDE | NUDE | NUDE1nudE neurodevelopment protein 116p13.11CNV:YES
CV:PGCnp
GO_Annotation
GSMA_IIE
PMID:cooccur
64285RHBDF1C16orf8 | Dist1 | EGFR-RS | gene-89 | gene-90 | hDist1rhomboid 5 homolog 1 (Drosophila)16p13.3DNM:Fromer_2014CompositeSet
84331FAM195AC16orf14 | c349E10.1family with sequence similarity 195 member A16p13.3CV:PGCnp
55794DDX28MDDX28DEAD-box helicase 2816q22.1CV:PGCnp
22861NLRP1CARD7 | CIDED | CLR17.1 | DEFCAP | DEFCAP-L/S | NAC | NALP1 | PP1044 | SLEV1 | VAMAS1NLR family, pyrin domain containing 117p13.2CV:PGCnp
DEG:Sanders_2013
DNM:Fromer_2014
GO_Annotation
CompositeSet
10514MYBBP1AP160 | PAP2MYB binding protein (P160) 1a17p13.3CV:PGCnpAscano FMRP targets
54475NLE1Nlenotchless homolog 1 (Drosophila)17q12CV:PGCnp
5245PHBHEL-215 | HEL-S-54e | PHB1prohibitin17q21CV:PGCnp
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
4804NGFRCD271 | Gp80-LNGFR | TNFRSF16 | p75(NTR) | p75NTRnerve growth factor receptor17q21-q22CV:PGCnp
GO_Annotation
PMID:cooccur
8714ABCC3ABC31 | EST90757 | MLP2 | MOAT-D | MRP3 | cMOAT2ATP binding cassette subfamily C member 317q22CV:PGCnp
DNM:McCarthy_2014
51651PTRH2BIT1 | CFAP37 | CGI-147 | IMNEPD | PTH | PTH 2 | PTH2peptidyl-tRNA hydrolase 217q23.1DMG:Jaffe_2016
57674RNF213ALO17 | C17orf27 | KIAA1618 | MYMY2 | MYSTR | NET57ring finger protein 21317q25.3CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
Ascano FMRP targets
339230CCDC137RaRFcoiled-coil domain containing 13717q25.3CV:PGCnp
DNM:Girard_2011
CompositeSet
6875TAF4BSPGF13 | TAF2C2 | TAFII105TATA-box binding protein associated factor 4b18q11.2CV:PGCnp
DMG:Wockner_2014
55621TRMT1TRM1tRNA methyltransferase 119p13.2CV:PGCnp
2193FARSACML33 | FARSL | FARSLA | FRSA | PheHAphenylalanyl-tRNA synthetase alpha subunit19p13.2CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
DNM:Fromer_2014
CompositeSet
56915EXOSC5RRP41B | RRP46 | Rrp46p | hRrp46p | p12Bexosome component 519q13.1CV:PGCnp
64857PLEKHG2ARHGEF42 | CLG | LDAMDpleckstrin homology and RhoGEF domain containing G219q13.2CV:PGCnp
DMG:Jaffe_2016
2067ERCC1COFS4 | RAD10 | UV20excision repair cross-complementation group 119q13.32DMG:Jaffe_2016
9266CYTH2ARNO | CTS18 | CTS18.1 | PSCD2 | PSCD2L | SEC7L | Sec7p-L | Sec7p-likecytohesin 219q13.33DMG:Wockner_2014
Network
63934ZNF667MIPU1zinc finger protein 66719q13.43CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
255231MCOLN2TRP-ML2 | TRPML2mucolipin 21p22CV:PGCnp
1296COL8A2FECD | FECD1 | PPCD | PPCD2collagen type VIII alpha 21p34.2CV:PGCnp
6723SRMPAPT | SPDSY | SPS1 | SRML1spermidine synthase1p36-p22CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
9064MAP3K6ASK2 | MAPKKK6 | MEKK6mitogen-activated protein kinase kinase kinase 61p36.11CV:PGCnp
DMG:Wockner_2014
51154MRTO4C1orf33 | MRT4 | dJ657E11.4MRT4 homolog, ribosome maturation factor1p36.13CV:PGCnp
DMG:Jaffe_2016
10903MTMR11CRAmyotubularin related protein 111q21.2CV:PGCnp
GSMA_I
GSMA_IIA
80308FLAD1FAD1 | FADS | PP591flavin adenine dinucleotide synthetase 11q21.3DMG:vanEijk_2014
DNM:Gulsuner_2013
GSMA_I
GSMA_IIA
54865GPATCH4GPATC4G-patch domain containing 41q22CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
3310HSPA6HSP70B'heat shock protein family A (Hsp70) member 61q23CV:PGCnp
DMG:Wockner_2014
GSMA_IIA
CompositeSet
27ABL2ABLL | ARGABL proto-oncogene 2, non-receptor tyrosine kinase1q25.2CV:PGCnp
DMG:Nishioka_2013
Network
493ATP2B4ATP2B2 | MXRA1 | PMCA4 | PMCA4b | PMCA4xATPase plasma membrane Ca2+ transporting 41q32.1CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
DNM:Awadalla_2010
Network
ION BALANCE
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_PocklingtonH1
G2Cdb.human_Synaptosome
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
64216TFB2MHkp1 | mtTFB2transcription factor B2, mitochondrial1q44CV:PGCnp
DMG:Jaffe_2016
54976C20orf27-chromosome 20 open reading frame 2720p13CV:PGCnp
DMG:Nishioka_2013
10528NOP56NOL5A | SCA36NOP56 ribonucleoprotein20p13CV:PGCnp
55902ACSS2ACAS2 | ACECS | ACS | ACSA | dJ1161H23.1acyl-CoA synthetase short-chain family member 220q11.22CV:PGCnp
7052TGM2G-ALPHA-h | GNAH | HEL-S-45 | TG2 | TGCtransglutaminase 220q12CV:GWASdb
CV:PGCnp
DNM:Fromer_2014
PMID:cooccur
CompositeSet
50861STMN3SCLIPstathmin 320q13.3CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
861RUNX1AML1 | AML1-EVI-1 | AMLCR1 | CBF2alpha | CBFA2 | EVI-1 | PEBP2aB | PEBP2alpharunt related transcription factor 121q22.3CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
PMID:cooccur
637BIDFP497BH3 interacting domain death agonist22q11.1Expression
GO_Annotation
GSMA_I
PMID:cooccur
23481PES1PESpescadillo ribosomal biogenesis factor 122q12.1CV:PGCnp
GSMA_I
Ascano FMRP targets
23762OSBP2HLM | ORP-4 | ORP4 | OSBPL1 | OSBPL4oxysterol binding protein 222q12.2CV:PGCnp
GSMA_I
6525SMTN-smoothelin22q12.2CV:PGCnp
GSMA_I
55615PRR5FLJ20185k | PP610 | PROTOR-1 | PROTOR1proline rich 522q13CV:PGCnp
DMG:vanEijk_2014
11078TRIOBPDFNB28 | HRIHFB2122 | TAP68 | TARA | dJ37E16.4TRIO and F-actin binding protein22q13.1DEG:Maycox_2009
PMID:cooccur
3099HK2HKII | HXK2hexokinase 22p13CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
Ascano FMRP targets
87178PNPT1COXPD13 | DFNB70 | OLD35 | PNPASE | old-35polyribonucleotide nucleotidyltransferase 12p15CV:PGCnp
DMG:Nishioka_2013
1844DUSP2PAC-1 | PAC1dual specificity phosphatase 22q11CV:PGCnp
GSMA_I
PMID:cooccur
64682ANAPC1APC1 | MCPR | TSG24anaphase promoting complex subunit 12q12.1CV:PGCnp
GSMA_I
GSMA_IIA
PMID:cooccur
CompositeSet
Darnell FMRP targets
8886DDX18MrDbDEAD-box helicase 182q14.1CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
Ascano FMRP targets
92856IMP4BXDC4IMP4 homolog, U3 small nucleolar ribonucleoprotein2q21.1CV:PGCnp
DEG:Sanders_2013
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
3329HSPD1CPN60 | GROEL | HLD4 | HSP-60 | HSP60 | HSP65 | HuCHA60 | SPG13heat shock protein family D (Hsp60) member 12q33.1CV:PGCnp
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_mitochondria
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
10056FARSBFARSLB | FRSB | HSPC173 | PheHB | PheRSphenylalanyl-tRNA synthetase beta subunit2q36.1CV:GWAScat
CV:PGCnp
DMG:Jaffe_2016
GSMA_IIA
GSMA_IIE
CompositeSet
4691NCLC23nucleolin2q37.1CV:PGCnp
Network
PMID:cooccur
Ascano FMRP targets
26354GNL3C77032 | E2IG3 | NNP47 | NSG protein nucleolar 33p21.1CV:PGCnp
DMG:Wockner_2014
LK:YES
4486MST1RCD136 | CDw136 | PTK8 | RONmacrophage stimulating 1 receptor3p21.3CV:PGCnp
DMG:Jaffe_2016
Network
84315MON1ASAND1MON1 homolog A, secretory trafficking associated3p21.31CV:PGCnp
259173ALS2CLRN49018ALS2 C-terminal like3p21.31CV:PGCnp
DNM:Girard_2011
PMID:cooccur
CompositeSet
23171GPD1LGPD1-Lglycerol-3-phosphate dehydrogenase 1-like3p22.3CV:PGCnp
GSMA_I
26577PCOLCE2PCPE2procollagen C-endopeptidase enhancer 23q21-q24CV:GWASdb
CV:PGCnp
84561SLC12A8CCC9solute carrier family 12 member 83q21.2CV:PGCnp
10195ALG3CDG1D | CDGS4 | CDGS6 | D16Ertd36e | NOT56L | Not56 | notALG3, alpha-1,3- mannosyltransferase3q27.1DMG:vanEijk_2014
10606PAICSADE2 | ADE2H1 | AIRC | PAISphosphoribosylaminoimidazole carboxylase; phosphoribosylaminoimidazolesuccinocarboxamide synthase4q12CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
1601DAB2DOC-2 | DOC2Dab, mitogen-responsive phosphoprotein, homolog 2 (Drosophila)5p13.1CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
DMG:vanEijk_2014
Network
PMID:cooccur
6949TCOF1MFD1 | TCS | TCS1 | treacletreacle ribosome biogenesis factor 15q32CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
GSMA_I
GSMA_IIA
GSMA_IIE
78991PCYOX1L-prenylcysteine oxidase 1 like5q32CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
4869NPM1B23 | NPMnucleophosmin (nucleolar phosphoprotein B23, numatrin)5q35.1CV:PGCnp
GSMA_IIA
Network
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
51491NOP16HSPC111 | HSPC185NOP16 nucleolar protein5q35.2CV:PGCnp
54540FAM193BIRIZIOfamily with sequence similarity 193 member B5q35.3CV:PGCnp
Expression
GSMA_IIA
9260PDLIM7LMP1 | LMP3PDZ and LIM domain 75q35.3CV:PGCnp
GSMA_IIA
Network
57510XPO5exp5exportin 56p21.1CV:PGCnp
DMG:vanEijk_2014
DMG:Wockner_2014
GSMA_IIE
Ascano FMRP targets
5252PHF1MTF2L2 | PCL1 | PHF2 | TDRD19C | hPHF1PHD finger protein 16p21.3CV:PGCnp
GSMA_I
23564DDAH2DDAH | DDAHII | G6a | HEL-S-277 | NG30dimethylarginine dimethylaminohydrolase 26p21.3CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_I
8334HIST1H2ACH2A/l | H2AFL | dJ221C16.4histone cluster 1, H2ac6p22.1CV:GWASdb
CV:PGCnp
GSMA_I
10799RPP40RNASEP1 | bA428J1.3ribonuclease P/MRP 40kDa subunit6p25.1CV:PGCnp
GSMA_I
56479KCNQ5Kv7.5potassium voltage-gated channel subfamily Q member 56q14CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
DNM:Fromer_2014
GO_Annotation
Network
PMID:cooccur
CompositeSet
57673BEND3KIAA1553BEN domain containing 36q21CV:GWASdb
CV:PGCnp
9590AKAP12AKAP250 | SSeCKSA-kinase anchoring protein 126q24-q25CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
DMG:Wockner_2014
Expression
646762LOC646762-uncharacterized LOC6467627p14.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
441263DTX2P1-UPK3BP1-PMS2P11PMS2L11DTX2P1-UPK3BP1-PMS2P11 readthrough, transcribed pseudogene7q11.23CV:GWASdb
CV:PGCnp
85002FAM86B1-family with sequence similarity 86 member B18p23.1DMG:Wockner_2014
55326AGPAT51AGPAT5 | LPAATE1-acylglycerol-3-phosphate O-acyltransferase 58p23.1CV:PGCnp
DMG:Jaffe_2016
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
54704PDP1PDH | PDP | PDPC | PPM2A | PPM2Cpyruvate dehyrogenase phosphatase catalytic subunit 18q22.1CV:PGCnp
DMG:Wockner_2014
5339PLECEBS1 | EBSMD | EBSND | EBSO | EBSOG | EBSPA | HD1 | LGMD2Q | PCN | PLEC1 | PLEC1b | PLTNplectin8q24CV:PGCnpSTRUCTURAL PLASTICITY
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
4609MYCMRTL | MYCC | bHLHe39 | c-Mycv-myc avian myelocytomatosis viral oncogene homolog8q24.21CV:PGCnp
DMG:Jaffe_2016
Expression
Network
PMID:cooccur
219ALDH1B1ALDH5 | ALDHXaldehyde dehydrogenase 1 family member B19p11.1CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
65083NOL6NRAP | UTP22 | bA311H10.1nucleolar protein 69p13.3CV:PGCnp
DMG:vanEijk_2014
10171RCL1RNAC | RPCL1RNA terminal phosphate cyclase-like 19p24.1-p23CV:GWASdb
CV:PGCnp
6709SPTAN1EIEE5 | NEAS | SPTA2spectrin alpha, non-erythrocytic 19q34.11Network
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
Potential synaptic genes