DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VPSSS
Uniprot ID:
Q9C0H5
Source protein:
Rho GTPase-activating protein 39
Source gene:
ARHGAP39
Class:
DEG_SPOP_SBC_1
Location:
673:677
E3 ligase:
SPOP
DEGRON score:
0.98
ASA_SCORE:
71.04
COIL:
0.9042
CONS_SCORE:
0.3148
DSS_SCORE:
0.3866
HELIX:
0.0596
FCONS_SCORE:
0.9985
RIG_SCORE:
0.6269
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S676Y
DO31150
OV
ICGC
VPSSS
DEG_SPOP_SBC_1
0.712
p.P674L
TCGA-EE-A20H
SKCM
TCGA
VPSSS
DEG_SPOP_SBC_1
0.6471
p.P674L
DO37986
SKCM
ICGC
VPSSS
DEG_SPOP_SBC_1
0.6471
p.V679I
TCGA-CV-7183
HNSC
TCGA
VPSSS
DEG_SPOP_SBC_1
0.2778
p.V679I
DO15695
HNSC
ICGC
VPSSS
DEG_SPOP_SBC_1
0.2778
p.V679I
DO229094
UTCA
ICGC
VPSSS
DEG_SPOP_SBC_1
0.2778
p.S671N
DO50913
LICA
ICGC
VPSSS
DEG_SPOP_SBC_1
0.2778
p.R686C
TCGA-VQ-A91D
STAD
TCGA
VPSSS
DEG_SPOP_SBC_1
0.0833
p.R686C
DO51783
STAD
ICGC
VPSSS
DEG_SPOP_SBC_1
0.0833
p.R686C
ACH-000999
Colon/Colorectal Cancer
CCLE
VPSSS
DEG_SPOP_SBC_1
0.0833
p.E664D
DO14566
HNSC
ICGC
VPSSS
DEG_SPOP_SBC_1
0.0833
Showing 1 to 11 of 11 entries
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Drug responses associated with ARHGAP39 mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
No data available in table
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All proteins holding degron of VPSSS
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q86UU0
B-cell CLL/lymphoma 9-like protein
DEG_SPOP_SBC_1
1219:1223
VPSSS
SPOP
0.9215
More...
O60238
BCL2/adenovirus E1B 19 kDa protein-interacting protein 3-like
DEG_SPOP_SBC_1
60:64
VPSSS
SPOP
0.9969
More...
Q96CF2
Charged multivesicular body protein 4c
DEG_SPOP_SBC_1
188:192
VPSSS
SPOP
0.9968
More...
Q6ZU64
Cilia- and flagella-associated protein 65
DEG_SPOP_SBC_1
1733:1737
VPSSS
SPOP
0.9924
More...
Q15517
Corneodesmosin
DEG_SPOP_SBC_1
398:402
VPSSS
SPOP
0.9779
More...
O43237
Cytoplasmic dynein 1 light intermediate chain 2
DEG_SPOP_SBC_1
403:407
VPSSS
SPOP
0.9934
More...
Q9H2F5
Enhancer of polycomb homolog 1
DEG_SPOP_SBC_1
802:806
VPSSS
SPOP
0.9538
More...
Q4ZHG4
Fibronectin type III domain-containing protein 1
DEG_SPOP_SBC_1
894:898
VPSSS
SPOP
0.9972
More...
O60353
Frizzled-6
DEG_SPOP_SBC_1
671:675
VPSSS
SPOP
0.997
More...
Q9Y5Q9
General transcription factor 3C polypeptide 3
DEG_SPOP_SBC_1
53:57
VPSSS
SPOP
0.9944
More...
Q04756
Hepatocyte growth factor activator
DEG_SPOP_SBC_1
90:94
VPSSS
SPOP
0.9524
More...
P20823
Hepatocyte nuclear factor 1-alpha
DEG_SPOP_SBC_1
333:337
VPSSS
SPOP
0.9824
More...
Q8NEZ4
Histone-lysine N-methyltransferase 2C
DEG_SPOP_SBC_1
4002:4006
VPSSS
SPOP
0.603
More...
O14529
Homeobox protein cut-like 2
DEG_SPOP_SBC_1
1413:1417
VPSSS
SPOP
0.9369
More...
Q8N9C0
Immunoglobulin superfamily member 22
DEG_SPOP_SBC_1
788:792
VPSSS
SPOP
0.9873
More...
Q86SU0
Immunoglobulin-like domain-containing receptor 1
DEG_SPOP_SBC_1
424:428
VPSSS
SPOP
0.9587
More...
Q8NI35
InaD-like protein
DEG_SPOP_SBC_1
1335:1339
VPSSS
SPOP
0.9943
More...
Q14872
Metal regulatory transcription factor 1
DEG_SPOP_SBC_1
36:40
VPSSS
SPOP
0.9447
More...
Q9HC84
Mucin-5B
DEG_SPOP_SBC_1
4894:4898
VPSSS
SPOP
0.9445
More...
O60346
PH domain leucine-rich repeat-containing protein phosphatase 1
DEG_SPOP_SBC_1
1466:1470
VPSSS
SPOP
0.9135
More...
Q5JRX3
Presequence protease, mitochondrial
DEG_SPOP_SBC_1
822:826
VPSSS
SPOP
0.8258
More...
Q3B8N5
Prospero homeobox protein 2
DEG_SPOP_SBC_1
45:49
VPSSS
SPOP
0.9929
More...
Q6DHV5
Protein CC2D2B
DEG_SPOP_SBC_1
173:177
VPSSS
SPOP
0.9766
More...
Q5JWR5
Protein dopey-1
DEG_SPOP_SBC_1
904:908
VPSSS
SPOP
0.6091
More...
Q86YD7
Protein FAM90A1
DEG_SPOP_SBC_1
452:456
VPSSS
SPOP
0.9261
More...
Showing 1 to 25 of 42 entries
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