DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PPDY
Uniprot ID:
O43390
Source protein:
Heterogeneous nuclear ribonucleoprotein R
Source gene:
HNRNPR
Class:
ITCH
Location:
461:464
E3 ligase:
ITCH,NEDD4
DEGRON score:
0.6735
ASA_SCORE:
45.15
COIL:
0.8605
CONS_SCORE:
0.3493
DSS_SCORE:
0.3327
HELIX:
0.0455
FCONS_SCORE:
0.9717
RIG_SCORE:
0.7652
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S463A
Daudi
haematopoietic_and_lymphoid_tissue
COSMIC
PPDY
ITCH
0.7588
p.S463A
DND-41
haematopoietic_and_lymphoid_tissue
COSMIC
PPDY
ITCH
0.7588
p.S463A
OCI-AML5
haematopoietic_and_lymphoid_tissue
COSMIC
PPDY
ITCH
0.7588
p.Y461N
TCGA-AD-6895
COAD
TCGA
PPDY
ITCH
0.7059
p.Y461N
DO8938
COAD
ICGC
PPDY
ITCH
0.7059
p.Q463E
S-117
soft_tissue
COSMIC
PPDY
ITCH
0.6744
p.Q463E
Daudi
haematopoietic_and_lymphoid_tissue
COSMIC
PPDY
ITCH
0.6744
p.S460F
MDA-MB-361
breast
COSMIC
PPDY
ITCH
0.3056
p.Y467C
TCGA-CG-5721
STAD
TCGA
PPDY
ITCH
0.25
p.Y467C
DO38192
STAD
ICGC
PPDY
ITCH
0.25
p.R467H
P31-FUJ
haematopoietic_and_lymphoid_tissue
COSMIC
PPDY
ITCH
0.25
p.G469D
TCGA-DM-A1DA
COAD
TCGA
PPDY
ITCH
0.1944
p.G469D
DO7852
COAD
ICGC
PPDY
ITCH
0.1944
p.G456W
TCGA-E2-A15J
BRCA
TCGA
PPDY
ITCH
0.1944
p.G456W
TCGA-YF-AA3L
BLCA
TCGA
PPDY
ITCH
0.1944
p.G456W
DO51951
BLCA
ICGC
PPDY
ITCH
0.1944
p.G456W
DO4116
BRCA
ICGC
PPDY
ITCH
0.1944
p.R454H
TCGA-BR-8361
STAD
TCGA
PPDY
ITCH
0.1389
p.R454H
DO48032
STAD
ICGC
PPDY
ITCH
0.1389
p.G454S
EJM
haematopoietic_and_lymphoid_tissue
COSMIC
PPDY
ITCH
0.1389
p.D472N
TCGA-AD-6895
COAD
TCGA
PPDY
ITCH
0.1111
p.D472N
DO8938
COAD
ICGC
PPDY
ITCH
0.1111
p.D472E
TCGA-AP-A051
UCEC
TCGA
PPDY
ITCH
0.1111
p.D472E
DO42673
UCEC
ICGC
PPDY
ITCH
0.1111
p.R452W
TCGA-BS-A0UV
UCEC
TCGA
PPDY
ITCH
0.0833
Showing 1 to 25 of 30 entries
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Drug responses associated with HNRNPR mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
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All proteins holding degron of PPDY
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q13405
39S ribosomal protein L49, mitochondrial
ITCH
32:35
PPDY
ITCH,NEDD4
0.9394
More...
Q8IZP9
Adhesion G-protein coupled receptor G2
ITCH
282:285
PPDY
ITCH,NEDD4
0.8863
More...
Q9UQB8
Brain-specific angiogenesis inhibitor 1-associated protein 2
ITCH
468:471
PPDY
ITCH,NEDD4
0.9965
More...
Q9UHR4
Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1
ITCH
436:439
PPDY
ITCH,NEDD4
0.9989
More...
P20810
Calpastatin
ITCH
478:481
PPDY
ITCH,NEDD4
0.9995
More...
O95985
DNA topoisomerase 3-beta-1
ITCH
490:493
PPDY
ITCH,NEDD4
0.8044
More...
Q6ZR08
Dynein axonemal heavy chain 12
ITCH
78:81
PPDY
ITCH,NEDD4
0.9568
More...
Q8TE73
Dynein axonemal heavy chain 5
ITCH
4368:4371
PPDY
ITCH,NEDD4
0.9769
More...
Q96JB1
Dynein axonemal heavy chain 8
ITCH
4233:4236
PPDY
ITCH,NEDD4
0.9067
More...
Q8N7E2
E3 ubiquitin-protein ligase CBLL2
ITCH
256:259
PPDY
ITCH,NEDD4
0.9915
More...
Q9UBS8
E3 ubiquitin-protein ligase RNF14
ITCH
80:83
PPDY
ITCH,NEDD4
0.791
More...
Q96I24
Far upstream element-binding protein 3
ITCH
540:543
PPDY
ITCH,NEDD4
0.995
More...
Q4L180
Filamin A-interacting protein 1-like
ITCH
809:812
PPDY
ITCH,NEDD4
0.861
More...
Q5T442
Gap junction gamma-2 protein
ITCH
330:333
PPDY
ITCH,NEDD4
0.9661
More...
Q8IUY3
GRAM domain-containing protein 2A
ITCH
41:44
PPDY
ITCH,NEDD4
0.9404
More...
P61296
Heart- and neural crest derivatives-expressed protein 2
ITCH
55:58
PPDY
ITCH,NEDD4
0.829
More...
O43390
Heterogeneous nuclear ribonucleoprotein R
ITCH
461:464
PPDY
ITCH,NEDD4
0.6735
More...
Q6UWN5
Ly6/PLAUR domain-containing protein 5
ITCH
94:97
PPDY
ITCH,NEDD4
0.7174
More...
Q8IZL2
Mastermind-like protein 2
ITCH
127:130
PPDY
ITCH,NEDD4
0.9403
More...
Q8IZL2
Mastermind-like protein 2
ITCH
798:801
PPDY
ITCH,NEDD4
0.8792
More...
P17568
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7
ITCH
26:29
PPDY
ITCH,NEDD4
0.9726
More...
Q8WY41
Nanos homolog 1
ITCH
102:105
PPDY
ITCH,NEDD4
0.9214
More...
Q8N2Q7
Neuroligin-1
ITCH
799:802
PPDY
ITCH,NEDD4
0.9681
More...
Q8NFZ4
Neuroligin-2
ITCH
766:769
PPDY
ITCH,NEDD4
0.9784
More...
Q8N0W4
Neuroligin-4, X-linked
ITCH
757:760
PPDY
ITCH,NEDD4
0.9948
More...
Showing 1 to 25 of 48 entries
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