Search results: The pahtway p3500 has 181 genes in the original annotation. Currently, there are 112 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group ? Functional group ?
10771ZMYND11BRAM1 | BS69 | MRD30zinc finger MYND-type containing 1110p14CV:PGCnp
DNM:Fromer_2014
CompositeSet
5979RETCDHF12 | CDHR16 | HSCR1 | MEN2A | MEN2B | MTC1 | PTC | RET-ELE1 | RET51ret proto-oncogene10q11.2CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
5599MAPK8JNK | JNK-46 | JNK1 | JNK1A2 | JNK21B1/2 | PRKM8 | SAPK1 | SAPK1cmitogen-activated protein kinase 810q11.22CV:PGCnp
DNM:Fromer_2014
Network
CompositeSet
1979EIF4EBP24EBP2 | PHASIIeukaryotic translation initiation factor 4E binding protein 210q21-q22CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
653509SFTPA1COLEC4 | PSAP | PSP-A | PSPA | SFTP1 | SFTPA1B | SP-A | SP-A1 | SPA | SPA1surfactant protein A110q22.3CV:PGCnp
92211CDHR1CORD15 | PCDH21 | PRCAD | RP65cadherin related family member 110q23.1CV:PGCnp
59ACTA2AAT6 | ACTSA | MYMY5actin, alpha 2, smooth muscle, aorta10q23.3CV:PGCnp
DMG:Jaffe_2016
DNM:Fromer_2014
CompositeSet
8861LDB1CLIM2 | NLILIM domain binding 110q24-q25CV:PGCnp
DMG:Wockner_2014
GO_Annotation
22978NT5C2GMP | NT5B | PNT5 | SPG45 | SPG65 | cN-II5'-nucleotidase, cytosolic II10q24.32CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
DMG:Wockner_2014
LK:YES
PMID:cooccur
6934TCF7L2TCF-4 | TCF4transcription factor 7 like 210q25.3CV:PGCnp
DMG:Jaffe_2016
Expression
PMID:cooccur
4925NUCB2HEL-S-109 | NEFAnucleobindin 211p15.1CV:GWASdb
CV:PGCnp
4135MAP6MAP6-N | MTAP6 | N-STOP | STOPmicrotubule associated protein 611q13.5Association
CV:PGCnp
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
10205MPZL2EVA | EVA1myelin protein zero like 211q24CV:PGCnp
GSMA_I
23310NCAPD3CAP-D3 | CAPD3 | hCAP-D3 | hHCP-6 | hcp-6non-SMC condensin II complex subunit D311q25CV:PGCnp
DNM:McCarthy_2014
5965RECQLRECQL1 | RecQ1RecQ like helicase12p12DMG:Jaffe_2016
65125WNK1HSAN2 | HSN2 | KDP | PPP1R167 | PRKWNK1 | PSK | p65WNK lysine deficient protein kinase 112p13.3CV:PGCnp
DEG:Maycox_2009
Expression
PMID:cooccur
CompositeSet
Darnell FMRP targets
92558CCDC64BICDR-1 | H_267D11.1coiled-coil domain containing 6412q24.23CV:PGCnp
DEG:Zhao_2015
DMG:Jaffe_2016
341640FREM2-FRAS1 related extracellular matrix protein 213q13.3CV:PGCnp
DMG:Jaffe_2016
DNM:Ambalavanan_2016
Ascano FMRP targets
112399EGLN3HIFP4H3 | HIFPH3 | PHD3egl-9 family hypoxia-inducible factor 314q13.1CV:GWASdb
CV:PGCnp
GSMA_I
3306HSPA2HSP70-2 | HSP70-3heat shock protein family A (Hsp70) member 214q24.1CV:PGCnp
PMID:cooccur
CompositeSet
79882ZC3H14MSUT-2 | NY-REN-37 | SUT2 | UKp68zinc finger CCCH-type containing 1414q31.3CV:PGCnp
DMG:Wockner_2014
5428POLGMDP1 | MIRAS | MTDPS4A | MTDPS4B | PEO | POLG1 | POLGA | SANDO | SCAEpolymerase (DNA) gamma, catalytic subunit15q25CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
PMID:cooccur
Ascano FMRP targets
89927C16orf45-chromosome 16 open reading frame 4516p13.11CNV:YES
CV:PGCnp
GSMA_IIE
11060WWP2AIP2 | WWp2-likeWW domain containing E3 ubiquitin protein ligase 216q22.1CV:PGCnp
DMG:Wockner_2014
197257LDHDDLDlactate dehydrogenase D16q23.1CV:PGCnp
DEG:Zhao_2015
DMG:Wockner_2014
11216AKAP10AKAP-10 | D-AKAP-2 | D-AKAP2 | PRKA10A-kinase anchoring protein 1017p11.1CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
5176SERPINF1EPC-1 | OI12 | OI6 | PEDF | PIG35serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 117p13.3CV:PGCnp
GO_Annotation
535ATP6V0A1ATP6N1 | ATP6N1A | Stv1 | VPP1 | Vph1 | a1ATPase H+ transporting V0 subunit a117q21CV:PGCnp
DMG:vanEijk_2014
ION BALANCE
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
56934CA10CA-RPX | CARPX | HUCEP-15carbonic anhydrase X17q21.33CV:PGCnp
DNM:Fromer_2014
GO_Annotation
CompositeSet
8313AXIN2AXIL | ODCRCSaxin 217q24.1CV:PGCnp
25926NOL11-nucleolar protein 1117q24.2CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
1995ELAVL3HUC | HUCL | PLE21ELAV like neuron-specific RNA binding protein 319p13.2DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
81794ADAMTS10ADAM-TS10 | ADAMTS-10 | WMS | WMS1ADAM metallopeptidase with thrombospondin type 1 motif 1019p13.2CV:PGCnp
DNM:Fromer_2014
CompositeSet
8190MIACD-RAPmelanoma inhibitory activity19q13.2PMID:cooccur
2068ERCC2COFS2 | EM9 | TFIIH | TTD | TTD1 | XPDexcision repair cross-complementation group 219q13.3DMG:Jaffe_2016
2152F3CD142 | TF | TFAcoagulation factor III, tissue factor1p22-p21CV:PGCnp
PMID:cooccur
9670IPO13IMP13 | KAP13 | LGL2 | RANBP13importin 131p34.1CV:PGCnp
DMG:vanEijk_2014
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
9672SDC3SDCN | SYND3syndecan 31p35.2CV:PGCnp
PMID:cooccur
Potential synaptic genes
10691GMEB1P96PIF | PIF96glucocorticoid modulatory element binding protein 11p35.3CV:PGCnp
54626HES2bHLHb40hes family bHLH transcription factor 21p36.31CV:PGCnp
DMG:Wockner_2014
390992HES3bHLHb43hes family bHLH transcription factor 31p36.31DMG:Jaffe_2016
DMG:Wockner_2014
9651PLCH2PLC-L4 | PLC-eta2 | PLCL4 | PLCeta2phospholipase C eta 21p36.32CV:GWAScat
CV:PGC128
CV:PGCnp
CompositeSet
Darnell FMRP targets
23248RPRD2HSPC099 | KIAA0460regulation of nuclear pre-mRNA domain containing 21q21.3CV:PGCnp
DMG:Jaffe_2016
CompositeSet
Darnell FMRP targets
8490RGS5MST092 | MST106 | MST129 | MSTP032 | MSTP092 | MSTP106 | MSTP129regulator of G-protein signaling 51q23.1CV:PGCnp
GSMA_IIA
Network
PMID:cooccur
4009LMX1ALMX1 | LMX1.1LIM homeobox transcription factor 1 alpha1q24.1CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
10216PRG4CACP | HAPO | JCAP | MSF | SZPproteoglycan 41q25-q31CV:PGCnp
PMID:cooccur
127829ARL8AARL10B | GIE2ADP ribosylation factor like GTPase 8A1q32.1CV:PGCnp
DMG:Jaffe_2016
1379CR1L-complement component 3b/4b receptor 1-like1q32.1CV:PGCnp
DNM:Fromer_2014
CompositeSet
7150TOP1TOPItopoisomerase (DNA) I20q12-q13.1CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
Ascano FMRP targets
4773NFATC2NFAT1 | NFATPnuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 220q13.2CV:GWASdb
CV:PGCnp
Network
3588IL10RBCDW210B | CRF2-4 | CRFB4 | D21S58 | D21S66 | IL-10R2interleukin 10 receptor subunit beta21q22.11CV:PGCnp
DMG:vanEijk_2014
DMG:Wockner_2014
PMID:cooccur
54069MIS18AB28 | C21orf45 | C21orf46 | FASP1 | MIS18alpha | hMis18alphaMIS18 kinetochore protein A21q22.11CV:PGCnp
DMG:Jaffe_2016
4282MIFGIF | GLIF | MMIFmacrophage migration inhibitory factor (glycosylation-inhibiting factor)22q11.23DNM:Fromer_2014
GSMA_I
PMID:cooccur
NEUROTROPHIN SIGNALING
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
6523SLC5A1D22S675 | NAGT | SGLT1solute carrier family 5 member 122q12.3CV:PGCnp
GSMA_I
PMID:cooccur
3162HMOX1HMOX1D | HO-1 | HSP32 | bK286B10heme oxygenase 122q13.1CV:PGCnp
PMID:cooccur
494143CHAC2-ChaC, cation transport regulator homolog 2 (E. coli)2p16CV:PGCnp
55120FANCLFAAP43 | PHF9 | POGFanconi anemia complementation group L2p16.1CV:PGCnp
1838DTNB-dystrobrevin beta2p24CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
Network
PMID:cooccur
4953ODC1ODCornithine decarboxylase 12p25CV:PGCnp
DMG:Nishioka_2013
29842TFCP2L1CRTR1 | LBP-9 | LBP9transcription factor CP2-like 12q14CV:PGCnp
DNM:McCarthy_2014
Expression
GSMA_I
GSMA_IIA
10267RAMP1-receptor (G protein-coupled) activity modifying protein 12q36-q37.1CV:PGCnp
DMG:Jaffe_2016
1230CCR1CD191 | CKR-1 | CKR1 | CMKBR1 | HM145 | MIP1aR | SCYAR1C-C motif chemokine receptor 13p21CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
25994HIGD1AHIG1 | RCF1aHIG1 hypoxia inducible domain family member 1A3p22.1CV:PGCnp
DMG:Jaffe_2016
8553BHLHE40BHLHB2 | DEC1 | HLHB2 | SHARP-2 | STRA13 | Stra14basic helix-loop-helix family member e403p26CV:PGCnp
PMID:cooccur
10752CHL1CALL | L1CAM2cell adhesion molecule L1 like3p26.1Association
CV:PGCnp
GO_Annotation
GR_COR
GR_Ng
GR_WM
PMID:cooccur
7879RAB7APRO2706 | RAB7RAB7A, member RAS oncogene family3q21.3CV:PGCnp
DMG:Wockner_2014
INTRACELLULAR TRAFFICKING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
1356CPCP-2ceruloplasmin (ferroxidase)3q23-q25CV:PGCnp
PMID:cooccur
344758GPR149IEDA | PGR10G protein-coupled receptor 1493q25.2CV:PGCnp
590BCHECHE1 | CHE2 | E1butyrylcholinesterase3q26.1-q26.2CV:PGCnp
PMID:cooccur
55892MYNNOSZF | SBBIZ1 | ZBTB31 | ZNF902myoneurin3q26.2CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
8626TP63AIS | B(p51A) | B(p51B) | EEC3 | KET | LMS | NBP | OFC8 | RHS | SHFM4 | TP53CP | TP53L | TP73L | p40 | p51 | p53CP | p63 | p73H | p73Ltumor protein p633q28CV:PGCnp
CV:PheWAS
Network
23527ACAP2CENTB2 | CNT-B2ArfGAP with coiled-coil, ankyrin repeat and PH domains 23q29CV:PGCnp
DMG:Jaffe_2016
55161TMEM331600019D15Rik | SHINC3transmembrane protein 334p13CV:GWASdb
CV:PGCnp
152485ZNF827-zinc finger protein 8274q31.22CV:PGCnp
DMG:vanEijk_2014
Darnell FMRP targets
56034PDGFCFALLOTEIN | SCDGFplatelet derived growth factor C4q32CV:PGCnp
DMG:Jaffe_2016
4726NDUFS6CI-13kA | CI-13kD-A | CI13KDANADH:ubiquinone oxidoreductase subunit S65p15.33CV:PGCnp
DMG:Jaffe_2016
79722ANKRD55-ankyrin repeat domain 555q11.2CV:PGCnp
PMID:cooccur
3796KIF2ACDCBM3 | HK2 | KIF2kinesin heavy chain member 2A5q12-q13Association
CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Potential synaptic genes
6902TBCA-tubulin folding cofactor A5q14.1CV:PGCnp
DMG:Jaffe_2016
2241FERPPP1R74 | TYK3 | p94-FerFER tyrosine kinase5q21CV:PGCnp
DEG:Zhao_2015
DMG:Jaffe_2016
Network
PMID:cooccur
5480PPICCYPCpeptidylprolyl isomerase C5q23.2CV:PGCnp
PMID:cooccur
4001LMNB1ADLD | LMN | LMN2 | LMNBlamin B15q23.2CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
GSMA_I
Network
G2Cdb.humanNRC
929CD14-CD14 molecule5q31.1CV:PGCnp
DNM:Fromer_2014
GSMA_I
PMID:cooccur
CompositeSet
8728ADAM19FKSG34 | MADDAM | MLTNBADAM metallopeptidase domain 195q33.3CV:GWAScat
CV:GWASdb
CV:PGCnp
CV:PheWAS
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
GSMA_IIE
Network
PMID:cooccur
2554GABRA1ECA4 | EIEE19 | EJM | EJM5gamma-aminobutyric acid type A receptor alpha1 subunit5q34ADT:Sun_2012
Association
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
GR_COR
GR_Ng
GR_WM
GSMA_I
GSMA_IIA
GSMA_IIE
Network
PMID:cooccur
LIGAND GATED ION SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
2568GABRP-gamma-aminobutyric acid type A receptor pi subunit5q35.1Association
CV:PGCnp
GO_Annotation
GR_COR
GR_Ng
GR_WM
GSMA_IIA
PMID:cooccur
449520GGNBP1-gametogenetin binding protein 1 (pseudogene)6p21CV:PGCnp
3304HSPA1BHSP70-1B | HSP70-2 | HSP70.2heat shock protein family A (Hsp70) member 1B6p21.3CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanNRC
5238PGM3AGM1 | IMD23 | PAGM | PGM 3phosphoglucomutase 36q14.1-q15CV:PGCnp
58528RRAGDRAGD | bA11D8.2.1Ras related GTP binding D6q15CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
4602MYBCmyb | c-myb | c-myb_CDS | efgMYB proto-oncogene, transcription factor6q22-q23CV:PGCnp
PMID:cooccur
254228FAM26EC6orf188 | dJ493F7.3family with sequence similarity 26 member E6q22.1CV:GWASdb
CV:PGCnp
5570PKIBPRKACN2protein kinase (cAMP-dependent, catalytic) inhibitor beta6q22.31CV:PGCnp
DMG:Wockner_2014
383ARG1-arginase 16q23CV:PGCnp
DMG:vanEijk_2014
55274PHF10BAF45A | XAP135PHD finger protein 106q27CV:PGCnp
DMG:Wockner_2014
5054SERPINE1PAI | PAI-1 | PAI1 | PLANH1serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 17q22.1CV:PGCnp
DMG:Nishioka_2013
GO_Annotation
55973BCAP29BAP29B-cell receptor-associated protein 297q22.3CV:PGCnp
DMG:Jaffe_2016
4741NEFMNEF3 | NF-M | NFMneurofilament, medium polypeptide8p21CV:GWAScat
CV:PGCnp
GO_Annotation
GSMA_I
GSMA_IIA
GSMA_IIE
Network
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanNRC
CompositeSet
27299ADAMDEC1M12.219ADAM-like, decysin 18p21.2CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
1508CTSBAPPS | CPSBcathepsin B8p22CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
Network
793CALB1CALB | D-28Kcalbindin 18q21.3CV:PGCnp
DMG:Nishioka_2013
PMID:cooccur
1807DPYSDHP | DHPasedihydropyrimidinase8q22CV:PGCnp
DMG:Wockner_2014
8581LY6DE48 | Ly-6Dlymphocyte antigen 6 complex, locus D8q24CV:PGCnp
25853DCAF12CT102 | KIAA1892 | TCC52 | WDR40ADDB1 and CUL4 associated factor 129p13.3CV:PGCnp
DMG:Jaffe_2016
Expression
51280GOLM1C9orf155 | GOLPH2 | GP73 | HEL46 | PSEC0257 | bA379P1.3golgi membrane protein 19q21.33CV:PGCnp
DMG:Wockner_2014
56254RNF20BRE1 | BRE1A | hBRE1ring finger protein 209q22CV:PGCnpAscano FMRP targets
Chromatin Remodeling Genes
1539CYLC2-cylicin, basic protein of sperm head cytoskeleton 29q31.1CV:GWASdb
CV:PGCnp
Expression
9329GTF3C4KAT12 | TF3C-delta | TFIII90 | TFIIIC290 | TFIIIC90 | TFIIICDELTAgeneral transcription factor IIIC subunit 49q34.13CV:GWASdb
CV:PGCnp
2902GRIN1GluN1 | MRD8 | NMD-R1 | NMDA1 | NMDAR1 | NR1glutamate ionotropic receptor NMDA type subunit 19q34.3Association
CV:PGCnp
GO_Annotation
GR_COR
GR_Ng
GR_WM
Network
PMID:cooccur
LIGAND GATED ION SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_PocklingtonH1
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
CompositeSet
Darnell FMRP targets
Potential synaptic genes
5230PGK1HEL-S-68p | MIG10 | PGKAphosphoglycerate kinase 1Xq13.3CV:PGCnp
DMG:vanEijk_2014
Expression
PMID:cooccur
CELL METABOLISM
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
CompositeSet
2717GLAGALAgalactosidase alphaXq22GO_Annotation
PMID:cooccur
8450CUL4BCUL-4B | MRXHF2 | MRXS15 | MRXSC | SFM2cullin 4BXq23CV:PGCnp
PMID:cooccur