Search results: The pahtway p1861 has 165 genes in the original annotation. Currently, there are 107 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group ? Functional group ?
220213OTUD1DUBA7 | OTDC1OTU deubiquitinase 110p12.2CV:PGCnp
59ACTA2AAT6 | ACTSA | MYMY5actin, alpha 2, smooth muscle, aorta10q23.3CV:PGCnp
DMG:Jaffe_2016
DNM:Fromer_2014
CompositeSet
9409PEX16PBD8A | PBD8Bperoxisomal biogenesis factor 1611p11.2CV:PGCnp
55626AMBRA1DCAF3 | WDR94autophagy/beclin-1 regulator 111p11.2CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
91252SLC39A13LZT-Hs9solute carrier family 39 member 1311p11.2CV:GWASdb
CV:PGCnp
DNM:Kranz_2015
PMID:cooccur
10944C11orf58IMAGE145052 | SMAPchromosome 11 open reading frame 5811p15.1CV:PGCnp
9024BRSK2C11orf7 | PEN11B | SAD1 | SADA | STK29BR serine/threonine kinase 211p15.5CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
CompositeSet
Darnell FMRP targets
402ARL2ARFL2ADP ribosylation factor like GTPase 211q13DMG:Nishioka_2013
DMG:Wockner_2014
57124CD248CD164L1 | TEM1CD248 molecule11q13CV:PGCnp
DMG:Wockner_2014
7439BEST1ARB | BEST | BMD | RP50 | TU15B | VMD2bestrophin 111q13CV:PGCnp
DEG:Zhao_2015
116985ARAP1CENTD2ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 111q13.4CV:GWASdb
CV:PGCnp
DNM:Fromer_2014
GO_Annotation
CompositeSet
Ascano FMRP targets
6660SOX5L-SOX5 | L-SOX5B | L-SOX5F | LAMSHFSRY-box 512p12.1CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
PMID:cooccur
29127RACGAP1CYK4 | HsCYK-4 | ID-GAP | MgcRacGAPRac GTPase activating protein 112q13.12CV:GWASdb
CV:PGCnp
GO_Annotation
23426GRIP1GRIPglutamate receptor interacting protein 112q14.3CV:PGCnp
GO_Annotation
PMID:cooccur
G2Cdb.human_mGluR5
Ascano FMRP targets
Potential synaptic genes
8562DENRDRP | DRP1 | SMAP-3density-regulated protein12q24.31CV:PGCnp
DMG:Jaffe_2016
79676OGFOD2-2-oxoglutarate and iron dependent oxygenase domain containing 212q24.31CV:PGCnp
LK:YES
84932RAB2B-RAB2B, member RAS oncogene family14q11.2CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
Expression
GSMA_I
2954GSTZ1GSTZ1-1 | MAAI | MAIglutathione S-transferase zeta 114q24.3CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
PMID:cooccur
5641LGMNAEP | LGMN1 | PRSC1legumain14q32.1CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
51621KLF13BTEB3 | FKLF2 | NSLP1 | RFLAT-1 | RFLAT1Kruppel-like factor 1315q12CNV:YES
CV:GWASdb
CV:PGCnp
DMG:Montano_2016
DMG:Wockner_2014
PMID:cooccur
7301TYRO3BYK | Dtk | Etk-2 | RSE | Rek | Sky | TifTYRO3 protein tyrosine kinase15q15CV:PGCnp
GO_Annotation
PMID:cooccur
5607MAP2K5HsT17454 | MAPKK5 | MEK5 | PRKMK5mitogen-activated protein kinase kinase 515q23CV:PGCnp
597BCL2A1ACC-1 | ACC-2 | ACC1 | ACC2 | BCL2L5 | BFL1 | GRS | HBPA1BCL2 related protein A115q24.3CV:GWASdb
CV:PGCnp
4122MAN2A2MANA2Xmannosidase alpha class 2A member 215q26.1CV:PGCnpCompositeSet
Darnell FMRP targets
23475QPRTHEL-S-90n | QPRTasequinolinate phosphoribosyltransferase16p11.2CNV:YES
CV:PGCnp
DMG:Wockner_2014
GSMA_IIE
PMID:cooccur
83723FAM57BFP1188family with sequence similarity 57 member B16p11.2CNV:YES
CV:PGCnp
GSMA_IIE
23162MAPK8IP3JIP-3 | JIP3 | JSAP1 | SYD2 | sydmitogen-activated protein kinase 8 interacting protein 316p13.3CV:PGCnp
DMG:Wockner_2014
INTRACELLULAR SIGNAL TRANSDUCTION
CompositeSet
Darnell FMRP targets
4489MT1AMT1 | MT1S | MTCmetallothionein 1A16q13CV:PGCnp
DMG:Wockner_2014
2775GNAO1EIEE17 | G-ALPHA-o | GNAOG protein subunit alpha o116q13Association
CV:PGCnp
DMG:Nishioka_2013
DNM:Xu_2012
GO_Annotation
Network
PMID:cooccur
G-PROTEIN RELAY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_mGluR5
G2Cdb.human_Synaptosome
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
57546PDP2PPM2B | PPM2C2pyruvate dehyrogenase phosphatase catalytic subunit 216q22.1CV:PGCnp
58191CXCL16CXCLG16 | SR-PSOX | SRPSOXC-X-C motif chemokine ligand 1617p13PMID:cooccur
84268RPAINHRIP | RIPRPA interacting protein17p13.2CV:PGCnp
DMG:Jaffe_2016
10693CCT6BCCT-zeta-2 | CCTZ-2 | Cctz2 | TCP-1-zeta-2 | TSA303chaperonin containing TCP1 subunit 6B17q12CV:PGCnp
DMG:Jaffe_2016
91603ZNF830CCDC16 | OMCG1zinc finger protein 83017q12CV:PGCnp
DMG:Jaffe_2016
6426SRSF1ASF | SF2 | SF2p33 | SFRS1 | SRp30aserine/arginine-rich splicing factor 117q22CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
10458BAIAP2BAP2 | FLAF3 | IRSP53BAI1 associated protein 217q25CV:PGCnp
DNM:Fromer_2014
GO_Annotation
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Potential synaptic genes
11201POLIRAD30B | RAD3OBpolymerase (DNA) iota18q21.1CV:PGCnp
PMID:cooccur
1463NCANCSPG3neurocan19p12CV:PGCnp
DMG:Jaffe_2016
DNM:Gulsuner_2013
LK:YES
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
83983TSSK6CT72 | FKSG82 | SSTK | TSSK4testis specific serine kinase 619p13.11CV:PGCnp
LK:YES
55621TRMT1TRM1tRNA methyltransferase 119p13.2CV:PGCnp
90480GADD45GIP1CKBBP2 | CKbetaBP2 | CRIF1 | MRP-L59 | PLINP | PLINP-1 | PRG6 | Plinp1GADD45G interacting protein 119p13.2CV:PGCnp
3383ICAM1BB2 | CD54 | P3.58intercellular adhesion molecule 119p13.2CV:PGCnp
CV:PheWAS
DMG:Wockner_2014
DNM:McCarthy_2014
8425LTBP4ARCL1C | LTBP-4 | LTBP4L | LTBP4Slatent transforming growth factor beta binding protein 419q13.1-q13.2CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
5184PEPDPROLIDASEpeptidase D19q13.11CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
348APOEAD2 | APO-E | LDLCQ5 | LPGapolipoprotein E19q13.2Association
Core
GO_Annotation
GR_COR
GR_Ng
GR_WM
Network
PMID:cooccur
CELL METABOLISM
CompositeSet
Darnell FMRP targets
339327ZNF546ZNF49zinc finger protein 54619q13.2CV:PGCnp
DEG:Zhao_2015
54922RASIP1RAINRas interacting protein 119q13.33CV:PGCnp
57535KIAA1324EIG121KIAA13241p13.3CV:PGCnp
DMG:Wockner_2014
8761PABPC4APP-1 | APP1 | PABP4 | iPABPpoly(A) binding protein, cytoplasmic 4 (inducible form)1p34.2CV:PGCnpG2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
284654RSPO1CRISTIN3 | RSPOR-spondin 11p34.3CV:PGCnp
DMG:Jaffe_2016
51441YTHDF2CAHL | HGRG8 | NY-REN-2YTH N(6)-methyladenosine RNA binding protein 21p35CV:PGCnp
10277UBE4BE4 | HDNB1 | UBOX3 | UFD2 | UFD2Aubiquitination factor E4B1p36.3CV:PGCnp
DMG:Jaffe_2016
7170TPM3CAPM1 | CFTD | HEL-189 | HEL-S-82p | NEM1 | OK/SW-cl.5 | TM-5 | TM3 | TM30 | TM30nm | TM5 | TPMsk3 | TRK | hscp30tropomyosin 31q21.2CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_I
GSMA_IIA
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
90780PYGO21190004M21Rikpygopus family PHD finger 21q21.3CV:PGCnp
GO_Annotation
GSMA_I
GSMA_IIA
55509BATF3JDP1 | JUNDM1 | SNFTbasic leucine zipper ATF-like transcription factor 31q32.3CV:PGCnp
DMG:Jaffe_2016
58ACTA1ACTA | ASMA | CFTD | CFTD1 | CFTDM | MPFD | NEM1 | NEM2 | NEM3 | SHPMactin, alpha 1, skeletal muscle1q42.13CV:PGCnp
DMG:Wockner_2014
Network
PMID:cooccur
25939SAMHD1CHBL2 | DCIP | HDDC1 | MOP-5 | SBBI88SAM domain and HD domain 120pter-q12CV:PGCnp
DMG:Jaffe_2016
84557MAP1LC3AATG8E | LC3 | LC3A | MAP1ALC3 | MAP1BLC3microtubule associated protein 1 light chain 3 alpha20q11.22CV:PGCnpCompositeSet
6647SOD1ALS | ALS1 | HEL-S-44 | IPOA | SOD | hSod1 | homodimersuperoxide dismutase 1, soluble21q22.11CV:PGCnp
GO_Annotation
PMID:cooccur
23181DIP2AC21orf106 | DIP2disco interacting protein 2 homolog A21q22.3CV:GWASdb
CV:PGCnp
PMID:cooccur
CompositeSet
Darnell FMRP targets
637BIDFP497BH3 interacting domain death agonist22q11.1Expression
GO_Annotation
GSMA_I
PMID:cooccur
65078RTN4RNGR | NOGORreticulon 4 receptor22q11.21Association
CNV:YES
CV:PGCnp
DMG:Nishioka_2013
GO_Annotation
GR_WM
GSMA_I
PMID:cooccur
CompositeSet
Darnell FMRP targets
23467NPTXRNPRneuronal pentraxin receptor22q13.1CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
CompositeSet
Darnell FMRP targets
Potential synaptic genes
11252PACSIN2SDPIIprotein kinase C and casein kinase substrate in neurons 222q13.2-q13.33CV:PGCnp
DEG:Sanders_2013
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
1639DCTN1DAP-150 | DP-150 | P135dynactin subunit 12p13CV:PGCnp
GO_Annotation
Network
PMID:cooccur
INTRACELLULAR TRAFFICKING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
10575CCT4CCT-DELTA | Cctd | SRBchaperonin containing TCP1 subunit 42p15CV:PGCnp
DMG:Wockner_2014
RNA AND PROTEIN SYNTHESIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
150962PUS10CCDC139 | DOBIpseudouridylate synthase 102p16.1CV:PGCnp
CV:PheWAS
27436EML4C2orf2 | ELP120 | EMAP-4 | EMAPL4 | ROPP120echinoderm microtubule associated protein like 42p21CV:PGCnp
DMG:Wockner_2014
GO_Annotation
805CALM2CAMII | LQT15 | PHKD | PHKD2 | caMcalmodulin 2 (phosphorylase kinase, delta)2p21CV:PGCnpINTRACELLULAR SIGNAL TRANSDUCTION
SEROTONIN
4613MYCNMODED | N-myc | NMYC | ODED | bHLHe37v-myc avian myelocytomatosis viral oncogene neuroblastoma derived homolog2p24.3CV:PGCnp
DMG:Jaffe_2016
51252FAM178B-family with sequence similarity 178 member B2q11.2CV:PGCnp
1524CX3CR1CCRL1 | CMKBRL1 | CMKDR1 | GPR13 | GPRV28 | V28C-X3-C motif chemokine receptor 13p21.3CV:PGCnp
PMID:cooccur
78987CRELD1AVSD2 | CIRRINcysteine rich with EGF like domains 13p25.3DMG:vanEijk_2014
7428VHLHRCA1 | RCA1 | VHL1 | pVHLvon Hippel-Lindau tumor suppressor3p25.3CV:PGCnp
Network
PMID:cooccur
3708ITPR1ACV | CLA4 | INSP3R1 | IP3R | IP3R1 | PPP1R94 | SCA15 | SCA16 | SCA29inositol 1,4,5-trisphosphate receptor type 13p26.1CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DNM:Fromer_2014
PMID:cooccur
G2Cdb.human_mGluR5
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
2932GSK3B-glycogen synthase kinase 3 beta3q13.3Association
CV:PGCnp
GO_Annotation
GR_COR
GR_WM
Network
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
1356CPCP-2ceruloplasmin (ferroxidase)3q23-q25CV:PGCnp
PMID:cooccur
347APOD-apolipoprotein D3q29CV:PGCnp
PMID:cooccur
CompositeSet
6649SOD3EC-SODsuperoxide dismutase 3, extracellular4p15.2CV:PGCnp
55646LYARZC2HC2 | ZLYARLy1 antibody reactive4p16.3CV:PGCnp
10983CCNICCNI1 | CYC1 | CYIcyclin I4q21.1CV:PGCnp
DMG:Wockner_2014
51316PLAC8C15 | DGIC | PNAS-144 | onzinplacenta specific 84q21.22CV:PGCnp
DMG:Jaffe_2016
6696SPP1BNSP | BSPI | ETA-1 | OPNsecreted phosphoprotein 14q22.1CV:PGCnp
CV:PheWAS
55314TMEM144-transmembrane protein 1444q32.1CV:PGCnp
DMG:Wockner_2014
Expression
4208MEF2CC5DELq14.3 | DEL5q14.3myocyte enhancer factor 2C5q14.3CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
5314PKHD1ARPKD | FCYT | TIGM1polycystic kidney and hepatic disease 1 (autosomal recessive)6p12.2CV:GWASdb
CV:PGCnp
GSMA_IIE
PMID:cooccur
6722SRFMCM1serum response factor6p21.1CV:PGCnp
DMG:Nishioka_2013
GSMA_IIE
PMID:cooccur
54209TREM2TREM-2 | Trem2a | Trem2b | Trem2ctriggering receptor expressed on myeloid cells 26p21.1CV:PGCnp
DNM:Xu_2012
GSMA_I
GSMA_IIE
PMID:cooccur
CompositeSet
7917BAG6BAG-6 | BAT3 | D6S52E | G3BCL2 associated athanogene 66p21.3CV:PGCnp
Expression
GSMA_I
Network
55168MRPS18AHumanS18b | MRP-S18-3 | MRPS18-3 | S18bmtmitochondrial ribosomal protein S18A6p21.3CV:PGCnp
DMG:Jaffe_2016
GSMA_IIE
140767NRSN1VMP | p24neurensin 16p22.3CV:GWASdb
CV:PGCnp
GO_Annotation
GSMA_I
23353SUN1UNC84ASad1 and UNC84 domain containing 17p22.3CV:PGCnp
2969GTF2IBAP135 | BTKAP1 | DIWS | GTFII-I | IB291 | SPIN | TFII-I | WBS | WBSCR6general transcription factor IIi7q11.23CV:PGCnp
Network
PMID:cooccur
440ASNSASNSD | TS11asparagine synthetase (glutamine-hydrolyzing)7q21.3CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
93979CPA5-carboxypeptidase A57q32CV:PGCnp
157855KCNU1KCNMC1 | KCa5 | KCa5.1 | Kcnma3 | Slo3potassium calcium-activated channel subfamily U member 18p11.23CV:PGCnp
DNM:Gulsuner_2013
2961GTF2E2FE | TF2E2 | TFIIE-Bgeneral transcription factor IIE subunit 28p12CV:PGCnp
DMG:Nishioka_2013
GSMA_IIA
GSMA_IIE
64641EBF2COE2 | EBF-2 | O/E-3 | OE-3early B-cell factor 28p21.2CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
157807CLVS1CRALBPL | RLBP1L1clavesin 18q12.3CV:PGCnp
CV:PheWAS
4683NBNAT-V1 | AT-V2 | ATV | NBS | NBS1 | P95nibrin8q21CV:PGCnp
25897RNF19ARNF19ring finger protein 19A, RBR E3 ubiquitin protein ligase8q22CV:PGCnp
CV:PheWAS
5820PVT1LINC00079 | NCRNA00079 | onco-lncRNA-100Pvt1 oncogene (non-protein coding)8q24CV:PGCnp
DMG:Wockner_2014
55234SMU1BWD | SMU-1 | fSAP57smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans)9p12CV:PGCnp
5253PHF2CENP-35 | GRC5 | JHDM1EPHD finger protein 29q22.31CV:GWASdb
CV:PGCnp
PMID:cooccur
Ascano FMRP targets
158135TTLL11C9orf20 | bA244O19.1tubulin tyrosine ligase like119q33.2CV:GWASdb
CV:PGCnp
DMG:Montano_2016
PMID:cooccur
393ARHGAP4C1 | RGC1 | RhoGAP4 | SrGAP4 | p115Rho GTPase activating protein 4Xq28CV:GWASdb
CV:PGCnp
DMG:vanEijk_2014
PMID:cooccur
3654IRAK1IRAK | pelleinterleukin 1 receptor associated kinase 1Xq28CV:PGCnp
Expression
Network
PMID:cooccur
Potential synaptic genes