DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PPLY
Uniprot ID:
P82914
Source protein:
28S ribosomal protein S15, mitochondrial
Source gene:
MRPS15
Class:
ITCH
Location:
192:195
E3 ligase:
ITCH,NEDD4
DEGRON score:
0.8188
ASA_SCORE:
78.125
COIL:
0.8763
CONS_SCORE:
0.2707
DSS_SCORE:
0.027
HELIX:
0.1003
FCONS_SCORE:
0.6778
RIG_SCORE:
0.9194
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T205A
TCGA-AD-A5EJ
COAD
TCGA
PPLY
ITCH
0.0556
p.T205A
DO50090
COAD
ICGC
PPLY
ITCH
0.0556
p.P193S
TCGA-AZ-4615
COAD
TCGA
PPLY
ITCH
0.6752
p.P193S
DO7977
COAD
ICGC
PPLY
ITCH
0.6752
p.R201S
TCGA-DA-A1IB
SKCM
TCGA
PPLY
ITCH
0.1667
p.R201S
DO38033
SKCM
ICGC
PPLY
ITCH
0.1667
p.Y189C
TCGA-NH-A5IV
COAD
TCGA
PPLY
ITCH
0.6944
p.Y189C
DO49095
COAD
ICGC
PPLY
ITCH
0.6944
p.P192S
DO230336
COCA
ICGC
PPLY
ITCH
0.6752
p.R202Q
DO233739
GACA
ICGC
PPLY
ITCH
0.1389
p.R202Q
DO229250
THCA
ICGC
PPLY
ITCH
0.1389
p.P193A
SIDM00534
Colorectal Carcinoma
GDSC
PPLY
ITCH
0.7503
p.P193A
HT-115
large_intestine
COSMIC
PPLY
ITCH
0.7503
p.F191S
ACH-000780
Lung Cancer
CCLE
PPLY
ITCH
0.3056
Drug responses associated with MRPS15 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PPLY
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O14746
Telomerase reverse transcriptase
ITCH
173:176
PPLY
ITCH,NEDD4
0.9126
More...
O75132
Zinc finger BED domain-containing protein 4
ITCH
349:352
PPLY
ITCH,NEDD4
0.9903
More...
O95429
BAG family molecular chaperone regulator 4
ITCH
34:37
PPLY
ITCH,NEDD4
0.9898
More...
P02774
Vitamin D-binding protein
ITCH
458:461
PPLY
ITCH,NEDD4
0.8999
More...
P20783
Neurotrophin-3
ITCH
115:118
PPLY
ITCH,NEDD4
0.966
More...
P54098
DNA polymerase subunit gamma-1
ITCH
128:131
PPLY
ITCH,NEDD4
0.9114
More...
P62508
Estrogen-related receptor gamma
ITCH
82:85
PPLY
ITCH,NEDD4
0.9981
More...
Q02080
Myocyte-specific enhancer factor 2B
ITCH
198:201
PPLY
ITCH,NEDD4
0.992
More...
Q07890
Son of sevenless homolog 2
ITCH
1317:1320
PPLY
ITCH,NEDD4
0.9994
More...
Q13443
Disintegrin and metalloproteinase domain-containing protein 9
ITCH
812:815
PPLY
ITCH,NEDD4
0.9977
More...
Q13796
Protein Shroom2
ITCH
429:432
PPLY
ITCH,NEDD4
0.9947
More...
Q14934
Nuclear factor of activated T-cells, cytoplasmic 4
ITCH
746:749
PPLY
ITCH,NEDD4
0.9988
More...
Q5VTT5
Myomesin-3
ITCH
824:827
PPLY
ITCH,NEDD4
0.901
More...
Q6NSI4
RPA-related protein RADX
ITCH
90:93
PPLY
ITCH,NEDD4
0.7785
More...
Q7Z6E9
E3 ubiquitin-protein ligase RBBP6
ITCH
562:565
PPLY
ITCH,NEDD4
0.9715
More...
Q86XL3
Ankyrin repeat and LEM domain-containing protein 2
ITCH
196:199
PPLY
ITCH,NEDD4
0.9937
More...
Q8N3G9
Transmembrane protein 130
ITCH
424:427
PPLY
ITCH,NEDD4
0.6297
More...
Q8NCG7
Diacylglycerol lipase-beta
ITCH
588:591
PPLY
ITCH,NEDD4
0.838
More...
Q8NCT1
Arrestin domain-containing protein 4
ITCH
395:398
PPLY
ITCH,NEDD4
0.8354
More...
Q8TDM6
Disks large homolog 5
ITCH
1166:1169
PPLY
ITCH,NEDD4
0.9662
More...
Q8WZ42
Titin
ITCH
15529:15532
PPLY
ITCH,NEDD4
0.8933
More...
Q8WZ42
Titin
ITCH
24273:24276
PPLY
ITCH,NEDD4
0.6137
More...
Q96B67
Arrestin domain-containing protein 3
ITCH
391:394
PPLY
ITCH,NEDD4
0.9963
More...
Q96CC6
Inactive rhomboid protein 1
ITCH
141:144
PPLY
ITCH,NEDD4
0.9927
More...
Q96JG9
Zinc finger protein 469
ITCH
1438:1441
PPLY
ITCH,NEDD4
0.9749
More...
Q99935
Opiorphin prepropeptide
ITCH
37:40
PPLY
ITCH,NEDD4
0.7838
More...
Q99958
Forkhead box protein C2
ITCH
485:488
PPLY
ITCH,NEDD4
0.9946
More...
Q9BXF3
Cat eye syndrome critical region protein 2
ITCH
1137:1140
PPLY
ITCH,NEDD4
0.8075
More...
Q9H0J4
Glutamine-rich protein 2
ITCH
1404:1407
PPLY
ITCH,NEDD4
0.9172
More...
Q9H1C4
Protein unc-93 homolog B1
ITCH
5:8
PPLY
ITCH,NEDD4
0.9981
More...
Q9HB07
MYG1 exonuclease
ITCH
17:20
PPLY
ITCH,NEDD4
0.6345
More...
Q9HCM1
Retroelement silencing factor 1
ITCH
13:16
PPLY
ITCH,NEDD4
0.9921
More...
Q9NYA4
Myotubularin-related protein 4
ITCH
1005:1008
PPLY
ITCH,NEDD4
0.9953
More...
Q9P0K8
Forkhead box protein J2
ITCH
230:233
PPLY
ITCH,NEDD4
0.8417
More...
Q9P209
Centrosomal protein of 72 kDa
ITCH
278:281
PPLY
ITCH,NEDD4
0.7298
More...
Q9P2G4
Microtubule-associated protein 10
ITCH
302:305
PPLY
ITCH,NEDD4
0.9678
More...
P82914
28S ribosomal protein S15, mitochondrial
ITCH
192:195
PPLY
ITCH,NEDD4
0.8188
More...
Q5JSZ5
Protein PRRC2B
ITCH
1924:1927
PPLY
ITCH,NEDD4
0.905
More...
Q8WWH5
Pseudouridylate synthase TRUB1
ITCH
197:200
PPLY
ITCH,NEDD4
0.9721
More...
Q9C0H5
Rho GTPase-activating protein 39
ITCH
310:313
PPLY
ITCH,NEDD4
0.9222
More...
Q2KHR3
Glutamine and serine-rich protein 1
ITCH
370:373
PPLY
ITCH,NEDD4
0.8458
More...
Q6AHZ1
Zinc finger protein 518A
ITCH
1092:1095
PPLY
ITCH,NEDD4
0.9935
More...
Q6ZRI6
Uncharacterized protein C15orf39
ITCH
70:73
PPLY
ITCH,NEDD4
0.981
More...
Q8NDH2
Leucine-rich repeat transmembrane protein CCDC168
ITCH
5560:5563
PPLY
ITCH,NEDD4
0.6888
More...
Q8TBH0
Arrestin domain-containing protein 2
ITCH
385:388
PPLY
ITCH,NEDD4
0.9798
More...
Q9ULL5
Proline-rich protein 12
ITCH
1296:1299
PPLY
ITCH,NEDD4
0.9929
More...
Q3C1V1
Uncharacterized protein C11orf91
ITCH
19:22
PPLY
ITCH,NEDD4
0.9367
More...
Q68EN5
Uncharacterized protein KIAA0895-like
ITCH
36:39
PPLY
ITCH,NEDD4
0.9661
More...
Q6DCA0
AMMECR1-like protein
ITCH
303:306
PPLY
ITCH,NEDD4
0.9894
More...
Q6MZM9
Proline-rich protein 27
ITCH
49:52
PPLY
ITCH,NEDD4
0.5514
More...
Q8N6L7
Transmembrane protein 252
ITCH
123:126
PPLY
ITCH,NEDD4
0.9539
More...