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Dataset Description
  • Dataset Name: HuGE Navigator
  • Species: Human
  • Method: Literature data mining
  • No. of Genes: 153
  • Phenotype: Alcohol-Related Disorders
  • Publication: Wei Yu, Melinda Clyne, Anja Wulf, Ajay Yesupriya, Marta Gwinn and Muin J. Khoury. Phenopedia. HuGE Navigator. Available at: http://www.hugenavigator.net/HuGENavigator/startPagePhenoPedia.do. Accessed [Jun. 10, 2008].
  • Dataset Summary: HuGE Navigator Phenopedia provides a disease-centered view of genetic association studies summarized in the online Human Genome Epidemiology (HuGE) encyclopedia. We extracted genes associated to 9 Alcohol-related diseases (Alcohol Amnestic Disorder; Alcohol Withdrawal Delirium; Alcohol Withdrawal Seizures; Alcohol-Induced Disorders; Alcohol-Induced Disorders, Nervous System; Alcohol-Related Disorders; Alcoholic Intoxication; Alcoholic Neuropathy; Alcoholism) from HuGE Navigator Phenopedia.

    Gene list of this dataset (153 genes)
    GeneIDSymbolNameGenetic locationPhenotypeNo. of Support Publications
    5243ABCB1ATP-binding cassette, sub-family B (MDR/TAP), member 17q21.1Alcohol-Related Disorders1
    1636ACEangiotensin I converting enzyme (peptidyl-dipeptidase A) 117q23.3Alcohol-Related Disorders5
    4185ADAM11ADAM metallopeptidase domain 1117q21.3Alcohol-Related Disorders1
    118ADD1adducin 1 (alpha)4p16.3Alcohol-Related Disorders1
    124ADH1Aalcohol dehydrogenase 1A (class I), alpha polypeptide4q21-q23Alcohol-Related Disorders2
    125ADH1Balcohol dehydrogenase 1B (class I), beta polypeptide4q21-q23Alcohol-Related Disorders53
    126ADH1Calcohol dehydrogenase 1C (class I), gamma polypeptide4q21-q23Alcohol-Related Disorders31
    127ADH4alcohol dehydrogenase 4 (class II), pi polypeptide4q21-q24|4q22Alcohol-Related Disorders3
    128ADH5alcohol dehydrogenase 5 (class III), chi polypeptide4q21-q25Alcohol-Related Disorders1
    130ADH6alcohol dehydrogenase 6 (class V)4q23Alcohol-Related Disorders1
    131ADH7alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide4q23-q24Alcohol-Related Disorders1
    150ADRA2Aadrenergic, alpha-2A-, receptor10q24-q26Alcohol-Related Disorders1
    183AGTangiotensinogen (serpin peptidase inhibitor, clade A, member 8)1q42-q43Alcohol-Related Disorders2
    185AGTR1angiotensin II receptor, type 13q21-q25Alcohol-Related Disorders2
    216ALDH1A1aldehyde dehydrogenase 1 family, member A19q21.13Alcohol-Related Disorders3
    219ALDH1B1aldehyde dehydrogenase 1 family, member B19p11.1Alcohol-Related Disorders1
    217ALDH2aldehyde dehydrogenase 2 family (mitochondrial)12q24.2Alcohol-Related Disorders63
    255239ANKK1ankyrin repeat and kinase domain containing 111q23.1Alcohol-Related Disorders2
    348APOEapolipoprotein E19q13.2Alcohol-Related Disorders11
    367ARandrogen receptor (dihydrotestosterone receptor; testicular feminization; spinal and bulbar muscular atrophy; Kennedy disease)Xq11.2-q12Alcohol-Related Disorders1
    410ARSAarylsulfatase A22q13.31-qter|22q13.33Alcohol-Related Disorders2
    627BDNFbrain-derived neurotrophic factor11p13Alcohol-Related Disorders2
    9607CARTPTCART prepropeptide5q13.2Alcohol-Related Disorders1
    847CATcatalase11p13Alcohol-Related Disorders1
    885CCKcholecystokinin3p22-p21.3Alcohol-Related Disorders2
    886CCKARcholecystokinin A receptor4p15.1-p15.2Alcohol-Related Disorders3
    887CCKBRcholecystokinin B receptor11p15.4Alcohol-Related Disorders2
    6352CCL5chemokine (C-C motif) ligand 517q11.2-q12Alcohol-Related Disorders1
    1231CCR2chemokine (C-C motif) receptor 23p21.31Alcohol-Related Disorders1
    1234CCR5chemokine (C-C motif) receptor 53p21.31Alcohol-Related Disorders1
    929CD14CD14 molecule5q22-q32|5q31.1Alcohol-Related Disorders6
    1056CELcarboxyl ester lipase (bile salt-stimulated lipase)9q34.3Alcohol-Related Disorders1
    1080CFTRcystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7)7q31.2Alcohol-Related Disorders6
    1129CHRM2cholinergic receptor, muscarinic 27q31-q35Alcohol-Related Disorders3
    1137CHRNA4cholinergic receptor, nicotinic, alpha 420q13.2-q13.3Alcohol-Related Disorders2
    8973CHRNA6cholinergic receptor, nicotinic, alpha 68p11.21Alcohol-Related Disorders1
    1141CHRNB2cholinergic receptor, nicotinic, beta 2 (neuronal)1q21.3Alcohol-Related Disorders1
    1142CHRNB3cholinergic receptor, nicotinic, beta 38p11.2Alcohol-Related Disorders1
    1268CNR1cannabinoid receptor 1 (brain)6q14-q15Alcohol-Related Disorders6
    1312COMTcatechol-O-methyltransferase22q11.21-q11.23|22q11.21Alcohol-Related Disorders7
    1394CRHR1corticotropin releasing hormone receptor 117q12-q22Alcohol-Related Disorders3
    1493CTLA4cytotoxic T-lymphocyte-associated protein 42q33Alcohol-Related Disorders2
    11330CTRCchymotrypsin C (caldecrin)1p36.21Alcohol-Related Disorders1
    6387CXCL12chemokine (C-X-C motif) ligand 12 (stromal cell-derived factor 1)10q11.1Alcohol-Related Disorders1
    1585CYP11B2cytochrome P450, family 11, subfamily B, polypeptide 28q21-q22Alcohol-Related Disorders1
    1543CYP1A1cytochrome P450, family 1, subfamily A, polypeptide 115q22-q24Alcohol-Related Disorders3
    1565CYP2D6cytochrome P450, family 2, subfamily D, polypeptide 622q13.1Alcohol-Related Disorders1
    1571CYP2E1cytochrome P450, family 2, subfamily E, polypeptide 110q24.3-qterAlcohol-Related Disorders27
    1621DBHdopamine beta-hydroxylase (dopamine beta-monooxygenase)9q34Alcohol-Related Disorders4
    1743DLSTdihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)14q24.3Alcohol-Related Disorders1
    1812DRD1dopamine receptor D15q35.1Alcohol-Related Disorders2
    1813DRD2dopamine receptor D211q23Alcohol-Related Disorders46
    1814DRD3dopamine receptor D33q13.3Alcohol-Related Disorders7
    1815DRD4dopamine receptor D411p15.5Alcohol-Related Disorders7
    2166FAAHfatty acid amide hydrolase1p35-p34Alcohol-Related Disorders2
    2534FYNFYN oncogene related to SRC, FGR, YES6q21Alcohol-Related Disorders2
    2554GABRA1gamma-aminobutyric acid (GABA) A receptor, alpha 15q34-q35Alcohol-Related Disorders6
    2555GABRA2gamma-aminobutyric acid (GABA) A receptor, alpha 24p12Alcohol-Related Disorders9
    2559GABRA6gamma-aminobutyric acid (GABA) A receptor, alpha 65q34Alcohol-Related Disorders5
    2560GABRB1gamma-aminobutyric acid (GABA) A receptor, beta 14p12Alcohol-Related Disorders2
    2561GABRB2gamma-aminobutyric acid (GABA) A receptor, beta 25q34Alcohol-Related Disorders4
    2562GABRB3gamma-aminobutyric acid (GABA) A receptor, beta 315q11.2-q12Alcohol-Related Disorders4
    2566GABRG2gamma-aminobutyric acid (GABA) A receptor, gamma 25q31.1-q33.1Alcohol-Related Disorders3
    2572GAD2glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)10p11.23Alcohol-Related Disorders1
    51083GALgalanin prepropeptide11q13.2Alcohol-Related Disorders2
    2587GALR1galanin receptor 118q23Alcohol-Related Disorders1
    8811GALR2galanin receptor 217q25.3Alcohol-Related Disorders1
    8484GALR3galanin receptor 322q13.1Alcohol-Related Disorders1
    2784GNB3guanine nucleotide binding protein (G protein), beta polypeptide 312p13Alcohol-Related Disorders1
    2899GRIK3glutamate receptor, ionotropic, kainate 31p34-p33Alcohol-Related Disorders2
    2902GRIN1glutamate receptor, ionotropic, N-methyl D-aspartate 19q34.3Alcohol-Related Disorders2
    2904GRIN2Bglutamate receptor, ionotropic, N-methyl D-aspartate 2B12p12Alcohol-Related Disorders6
    2917GRM7glutamate receptor, metabotropic 73p26.1-p25.1Alcohol-Related Disorders1
    2918GRM8glutamate receptor, metabotropic 87q31.3-q32.1Alcohol-Related Disorders1
    2938GSTA1glutathione S-transferase A16p12.1Alcohol-Related Disorders1
    2944GSTM1glutathione S-transferase M11p13.3Alcohol-Related Disorders9
    2947GSTM3glutathione S-transferase M3 (brain)1p13.3Alcohol-Related Disorders1
    2950GSTP1glutathione S-transferase pi11q13Alcohol-Related Disorders6
    2952GSTT1glutathione S-transferase theta 122q11.23Alcohol-Related Disorders7
    3077HFEhemochromatosis6p21.3Alcohol-Related Disorders7
    3105HLA-Amajor histocompatibility complex, class I, A6p21.3Alcohol-Related Disorders1
    3106HLA-Bmajor histocompatibility complex, class I, B6p21.3Alcohol-Related Disorders1
    3107HLA-Cmajor histocompatibility complex, class I, C6p21.3Alcohol-Related Disorders1
    3176HNMThistamine N-methyltransferase2q22.1Alcohol-Related Disorders2
    3350HTR1A5-hydroxytryptamine (serotonin) receptor 1A5q11.2-q13Alcohol-Related Disorders1
    3351HTR1B5-hydroxytryptamine (serotonin) receptor 1B6q13Alcohol-Related Disorders9
    3356HTR2A5-hydroxytryptamine (serotonin) receptor 2A13q14-q21Alcohol-Related Disorders6
    3358HTR2C5-hydroxytryptamine (serotonin) receptor 2CXq24Alcohol-Related Disorders4
    3361HTR5A5-hydroxytryptamine (serotonin) receptor 5A7q36.1Alcohol-Related Disorders1
    3363HTR75-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)10q21-q24Alcohol-Related Disorders1
    3458IFNGinterferon, gamma12q14Alcohol-Related Disorders1
    3586IL10interleukin 101q31-q32Alcohol-Related Disorders5
    3552IL1Ainterleukin 1, alpha2q14Alcohol-Related Disorders2
    3553IL1Binterleukin 1, beta2q14Alcohol-Related Disorders2
    3554IL1R1interleukin 1 receptor, type I2q12Alcohol-Related Disorders1
    3557IL1RNinterleukin 1 receptor antagonist2q14.2Alcohol-Related Disorders3
    3569IL6interleukin 6 (interferon, beta 2)7p21Alcohol-Related Disorders1
    3576IL8interleukin 84q13-q21Alcohol-Related Disorders1
    3856KRT8keratin 812q13Alcohol-Related Disorders1
    4049LTAlymphotoxin alpha (TNF superfamily, member 1)6p21.3Alcohol-Related Disorders1
    4128MAOAmonoamine oxidase AXp11.3Alcohol-Related Disorders15
    4129MAOBmonoamine oxidase BXp11.23Alcohol-Related Disorders1
    11343MGLLmonoglyceride lipase3q21.3Alcohol-Related Disorders1
    4524MTHFR5,10-methylenetetrahydrofolate reductase (NADPH)1p36.3Alcohol-Related Disorders5
    9NAT1N-acetyltransferase 1 (arylamine N-acetyltransferase)8p23.1-p21.3Alcohol-Related Disorders1
    10NAT2N-acetyltransferase 2 (arylamine N-acetyltransferase)8p22Alcohol-Related Disorders1
    4684NCAM1neural cell adhesion molecule 111q23.1Alcohol-Related Disorders1
    4790NFKB1nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 (p105)4q24Alcohol-Related Disorders1
    4846NOS3nitric oxide synthase 3 (endothelial cell)7q36Alcohol-Related Disorders1
    4852NPYneuropeptide Y7p15.1Alcohol-Related Disorders8
    1728NQO1NAD(P)H dehydrogenase, quinone 116q22.1Alcohol-Related Disorders1
    4835NQO2NAD(P)H dehydrogenase, quinone 26pter-q12Alcohol-Related Disorders1
    4929NR4A2nuclear receptor subfamily 4, group A, member 22q22-q23Alcohol-Related Disorders1
    9369NRXN3neurexin 314q31Alcohol-Related Disorders1
    4915NTRK2neurotrophic tyrosine kinase, receptor, type 29q22.1Alcohol-Related Disorders1
    4985OPRD1opioid receptor, delta 11p36.1-p34.3Alcohol-Related Disorders3
    4986OPRK1opioid receptor, kappa 18q11.2Alcohol-Related Disorders3
    4987OPRL1opiate receptor-like 120q13.33Alcohol-Related Disorders2
    4988OPRM1opioid receptor, mu 16q24-q25Alcohol-Related Disorders17
    10280OPRS1opioid receptor, sigma 19p13.3Alcohol-Related Disorders1
    5080PAX6paired box 611p13Alcohol-Related Disorders1
    5173PDYNprodynorphin20pter-p12Alcohol-Related Disorders2
    5179PENKproenkephalin8q23-q24Alcohol-Related Disorders1
    5368PNOCprepronociceptin8p21Alcohol-Related Disorders1
    5443POMCproopiomelanocortin (adrenocorticotropin/ beta-lipotropin/ alpha-melanocyte stimulating hormone/ beta-melanocyte stimulating hormone/ beta-endorphin)2p23.3Alcohol-Related Disorders1
    5468PPARGperoxisome proliferator-activated receptor gamma3p25Alcohol-Related Disorders1
    5644PRSS1protease, serine, 1 (trypsin 1)7q32-qter|7q34Alcohol-Related Disorders3
    5646PRSS3protease, serine, 39p11.2Alcohol-Related Disorders1
    5914RARAretinoic acid receptor, alpha17q21Alcohol-Related Disorders1
    5915RARBretinoic acid receptor, beta3p24Alcohol-Related Disorders1
    5916RARGretinoic acid receptor, gamma12q13Alcohol-Related Disorders1
    6256RXRAretinoid X receptor, alpha9q34.3Alcohol-Related Disorders1
    6257RXRBretinoid X receptor, beta6p21.3Alcohol-Related Disorders2
    6258RXRGretinoid X receptor, gamma1q22-q23Alcohol-Related Disorders1
    6571SLC18A2solute carrier family 18 (vesicular monoamine), member 210q25Alcohol-Related Disorders1
    6506SLC1A2solute carrier family 1 (glial high affinity glutamate transporter), member 211p13-p12Alcohol-Related Disorders2
    6530SLC6A2solute carrier family 6 (neurotransmitter transporter, noradrenalin), member 216q12.2Alcohol-Related Disorders2
    6531SLC6A3solute carrier family 6 (neurotransmitter transporter, dopamine), member 35p15.3Alcohol-Related Disorders14
    6532SLC6A4solute carrier family 6 (neurotransmitter transporter, serotonin), member 417q11.1-q12Alcohol-Related Disorders38
    6622SNCAsynuclein, alpha (non A4 component of amyloid precursor)4q21Alcohol-Related Disorders2
    6648SOD2superoxide dismutase 2, mitochondrial6q25.3Alcohol-Related Disorders5
    6690SPINK1serine peptidase inhibitor, Kazal type 15q32Alcohol-Related Disorders8
    50833TAS2R16taste receptor, type 2, member 167q31.1-q31.3|7q31Alcohol-Related Disorders1
    5726TAS2R38taste receptor, type 2, member 387q34Alcohol-Related Disorders1
    7040TGFB1transforming growth factor, beta 119q13.2|19q13.1Alcohol-Related Disorders2
    7054THtyrosine hydroxylase11p15.5Alcohol-Related Disorders1
    7124TNFtumor necrosis factor (TNF superfamily, member 2)6p21.3Alcohol-Related Disorders8
    7157TP53tumor protein p5317p13.1Alcohol-Related Disorders1
    7166TPH1tryptophan hydroxylase 1 (tryptophan 5-monooxygenase)11p15.3-p14Alcohol-Related Disorders7
    121278TPH2tryptophan hydroxylase 212q21.1Alcohol-Related Disorders2
    54970TTC12tetratricopeptide repeat domain 1211q23.1Alcohol-Related Disorders1
    7515XRCC1X-ray repair complementing defective repair in Chinese hamster cells 119q13.2Alcohol-Related Disorders1
    374879ZNF699zinc finger protein 69919p13.2Alcohol-Related Disorders1