Search results: The pahtway p4386 has 414 genes in the original annotation. Currently, there are 237 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

Because the gene page contains a lot of information, it takes on average 3-5 seconds to load. So when you click a gene ID, please be patient for the page to load.

Gene ID Symbol Synonyms Official Full Name Location SZ group ? Functional group ?
79754ASB13-ankyrin repeat and SOCS box containing 1310p15.1CV:PGCnp
DMG:Jaffe_2016
Ascano FMRP targets
3422IDI1IPP1 | IPPI1isopentenyl-diphosphate delta isomerase 110p15.3CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
Expression
22943DKK1DKK-1 | SKdickkopf WNT signaling pathway inhibitor 110q11.2CV:PGCnp
PMID:cooccur
220963SLC16A9C10orf36 | MCT9solute carrier family 16 member 910q21.2CV:GWASdb
CV:PGCnp
CV:PheWAS
29982NRBF2COPR | COPR1 | COPR2 | NRBF-2nuclear receptor binding factor 210q21.3CV:PGCnp
9044BTAF1MOT1 | TAF(II)170 | TAF172 | TAFII170B-TFIID TATA-box binding protein associated factor 110q22-q23CV:GWASdb
CV:PGCnp
7414VCLCMD1W | CMH15 | HEL114 | MV | MVCLvinculin10q22.2CV:PGCnp
Network
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
57559STAMBPL1ALMalpha | AMSH-FP | AMSH-LP | bA399O19.2STAM binding protein like 110q23.31DMG:Jaffe_2016
9060PAPSS2ATPSK2 | BCYM4 | SK23'-phosphoadenosine 5'-phosphosulfate synthase 210q24CV:GWASdb
CV:PGCnp
DEG:Sanders_2013
DMG:Wockner_2014
Expression
6877TAF5TAF(II)100 | TAF2D | TAFII-100 | TAFII100TATA-box binding protein associated factor 510q24-q25.2CV:PGCnp
LK:YES
56165TDRD1CT41.1tudor domain containing 110q25.3CV:PGCnp
DNM:Gulsuner_2013
57700FAM160B1KIAA1600 | bA106M7.3family with sequence similarity 160 member B110q25.3CV:PGCnp
DNM:Fromer_2014
CompositeSet
5791PTPREHPTPE | PTPE | R-PTP-EPSILONprotein tyrosine phosphatase, receptor type E10q26CV:PGCnp
GSMA_IIA
PMID:cooccur
22841RAB11FIP2Rab11-FIP2 | nRip11RAB11 family interacting protein 2 (class I)10q26.11CV:PGCnp
DMG:Wockner_2014
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
2132EXT2SOTV | SSMSexostosin glycosyltransferase 211p12-p11CV:PGCnpG2Cdb.humanPSD
G2Cdb.humanPSP
Ascano FMRP targets
1982EIF4G2AAG1 | DAP5 | NAT1 | P97eukaryotic translation initiation factor 4 gamma 211p15DMG:Jaffe_2016CompositeSet
Darnell FMRP targets
9646CTR9SH2BP1 | TSBP | p150 | p150TSPCTR9 homolog, Paf1/RNA polymerase II complex component11p15.3CV:GWAScat
CV:GWASdb
CV:PGCnp
Ascano FMRP targets
133ADMAM | PAMPadrenomedullin11p15.4DMG:Jaffe_2016
PMID:cooccur
10313RTN3ASYIP | HAP | NSPL2 | NSPLII | RTN3-A1reticulon 311q13CV:PGCnpG2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
4314MMP3CHDS6 | MMP-3 | SL-1 | STMY | STMY1 | STR1matrix metallopeptidase 311q22.3PMID:cooccur
1737DLATDLTA | PDC-E2 | PDCE2dihydrolipoamide S-acetyltransferase11q23.1CV:PGCnp
DMG:Wockner_2014
GSMA_I
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_mitochondria
G2Cdb.human_Synaptosome
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
2113ETS1ETS-1 | EWSR2 | c-ets-1 | p54ETS proto-oncogene 1, transcription factor11q23.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
55711FAR2HEL-S-81 | MLSTD1 | SDR10E2fatty acyl-CoA reductase 212p11.22CV:PGCnp
81539SLC38A1ATA1 | NAT2 | SAT1 | SNAT1solute carrier family 38 member 112q13.11CV:PGCnp
GO_Annotation
10024TROAPTASTINtrophinin associated protein12q13.12DMG:Jaffe_2016
8445DYRK2-dual specificity tyrosine phosphorylation regulated kinase 212q15CV:PGCnp
DMG:Montano_2016
490ATP2B1PMCA1 | PMCA1kbATPase plasma membrane Ca2+ transporting 112q21.3CV:PGCnp
Network
ION BALANCE
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_mGluR5
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
282809POC1BCORD20 | PIX1 | TUWD12 | WDR51BPOC1 centriolar protein B12q21.33CV:PGCnp
1848DUSP6HH19 | MKP3 | PYST1dual specificity phosphatase 612q21.33CV:PGCnp
DMG:Jaffe_2016
Expression
PMID:cooccur
10019SH2B3IDDM20 | LNKSH2B adaptor protein 312q24CV:PGCnp
DEG:Maycox_2009
DMG:Wockner_2014
Network
5501PPP1CCPP-1G | PP1C | PPP1Gprotein phosphatase 1 catalytic subunit gamma12q24.1-q24.2CV:PGCnpG2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
Chromatin Remodeling Genes
Potential synaptic genes
488ATP2A2ATP2B | DAR | DD | SERCA2ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 212q24.11CV:GWAScat
CV:PGC128
CV:PGCnp
GO_Annotation
PMID:cooccur
ION BALANCE
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
160760PPTC7TA-PP2C | TAPP2CPTC7 protein phosphatase homolog12q24.11CV:PGCnp
8562DENRDRP | DRP1 | SMAP-3density-regulated protein12q24.31CV:PGCnp
DMG:Jaffe_2016
121260SLC15A4FP12591 | PHT1 | PTR4solute carrier family 15 member 412q24.32CV:PGCnp
DMG:Wockner_2014
Expression
10186LHFP-lipoma HMGIC fusion partner13q12CV:PGCnp
DMG:Nishioka_2013
26960NBEABCL8B | LYST2neurobeachin13q13CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
Network
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
Potential synaptic genes
10206TRIM13CAR | DLEU5 | LEU5 | RFP2 | RNF77tripartite motif containing 1313q14CV:PGCnp
3839KPNA3IPOA4 | SRP1 | SRP1gamma | SRP4 | hSRP1karyopherin subunit alpha 313q14.3Association
CV:GWASdb
CV:PGCnp
PMID:cooccur
8847DLEU21B4 | BCMSUN | DLB2 | LEU2 | LINC00022 | MIR15AHG | NCRNA00022 | RFP2OS | TRIM13OSdeleted in lymphocytic leukemia 2 (non-protein coding)13q14.3CV:PGCnp
DMG:Wockner_2014
Expression
PMID:cooccur
1282COL4A1BSVD | RATORcollagen type IV alpha 113q34CV:GWASdb
CV:PGCnp
7027TFDP1DILC | DP1 | DRTF1 | Dp-1transcription factor Dp-113q34CV:PGCnp
DMG:Wockner_2014
8660IRS2IRS-2insulin receptor substrate 213q34CV:PGCnp
GO_Annotation
PMID:cooccur
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
9056SLC7A7LAT3 | LPI | MOP-2 | Y+LAT1 | y+LAT-1solute carrier family 7 member 714q11.2CV:PGCnp
DMG:Jaffe_2016
GSMA_I
4247MGAT2CDG2A | CDGS2 | GLCNACTII | GNT-II | GNT2mannosyl (alpha-1,6-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase14q21CV:PGCnp
11169WDHD1AND-1 | AND1 | CHTF4 | CTF4WD repeat and HMG-box DNA binding protein 114q22.2CV:PGCnpAscano FMRP targets
145407C14orf37c14_5376chromosome 14 open reading frame 3714q23.1CV:PGCnp
DMG:Jaffe_2016
10972TMED10P24(DELTA) | S31I125 | S31III125 | TMP21 | Tmp-21-I | p23 | p24d1transmembrane p24 trafficking protein 1014q24.3CV:PGCnp
DMG:Wockner_2014
GO_Annotation
23405DICER1DCR1 | Dicer | Dicer1e | HERNA | K12H4.8-LIKE | MNG1 | RMSE2dicer 1 ribonuclease III14q32.13CV:PGCnp
DEG:Sanders_2013
DMG:Wockner_2014
DNM:Fromer_2014
PMID:cooccur
CompositeSet
Darnell FMRP targets
81614NIPA2-non imprinted in Prader-Willi/Angelman syndrome 215q11.2CV:PGCnp
Expression
PMID:cooccur
440270GOLGA8BGOLGA5golgin A8 family member B15q14CV:PGCnp
DMG:Wockner_2014
7057THBS1THBS | THBS-1 | TSP | TSP-1 | TSP1thrombospondin 115q15CV:PGCnp
DNM:Xu_2012
PMID:cooccur
CompositeSet
11339OIP55730547N13Rik | CT86 | LINT-25 | MIS18B | MIS18beta | hMIS18betaOpa interacting protein 515q15.1CV:PGCnp
DNM:Fromer_2014
25963TMEM87A-transmembrane protein 87A15q15.1CV:PGCnp
255252LRRC57-leucine rich repeat containing 5715q15.2CV:PGCnp
DMG:Nishioka_2013
Ascano FMRP targets
26035GLCEHSEPIglucuronic acid epimerase15q23CV:PGCnp
1138CHRNA5LNCR2cholinergic receptor nicotinic alpha 5 subunit15q24CV:PGC128
CV:PGCnp
GO_Annotation
PMID:cooccur
613037LOC613037-nuclear pore complex interacting protein pseudogene16p11.2GSMA_IIE
23594ORC6ORC6Lorigin recognition complex subunit 616q12CV:PGCnp
GSMA_IIE
1459CSNK2A2CK2A2 | CK2alpha' | CSNK2A1casein kinase 2 alpha 216q21CV:PGCnp
DMG:Nishioka_2013
DMG:vanEijk_2014
Network
146223CMTM4CKLFSF4CKLF like MARVEL transmembrane domain containing 416q21-q22.1CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
1783DYNC1LI2DNCLI2 | LIC2dynein cytoplasmic 1 light intermediate chain 216q22.1CV:PGCnpCompositeSet
865CBFBPEBP2Bcore-binding factor, beta subunit16q22.1CV:PGCnp
DMG:Wockner_2014
9057SLC7A6LAT-2 | LAT3 | y+LAT-2solute carrier family 7 member 616q22.1CV:PGCnp
DMG:Nishioka_2013
DNM:Fromer_2014
CompositeSet
23035PHLPP2PHLPPL | PPM3BPH domain and leucine rich repeat protein phosphatase 216q22.2CV:PGCnp
6341SCO1SCOD1SCO1 cytochrome c oxidase assembly protein17p13.1CV:PGCnp
DMG:Jaffe_2016
1398CRKCRKII | p38v-crk avian sarcoma virus CT10 oncogene homolog17p13.3CV:PGCnp
Network
8851CDK5R1CDK5P35 | CDK5R | NCK5A | p23 | p25 | p35 | p35nck5acyclin-dependent kinase 5, regulatory subunit 1 (p35)17q11.2CV:PGCnp
DMG:Nishioka_2013
GO_Annotation
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
6928HNF1BFJHN | HNF-1-beta | HNF-1B | HNF1beta | HNF2 | HPC11 | LF-B3 | LFB3 | MODY5 | TCF-2 | TCF2 | VHNF1HNF1 homeobox B17q12CNV:YES
CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
11056DDX52HUSSY19 | ROK1DEAD-box helicase 5217q21.1CNV:YES
CV:GWAScat
CV:GWASdb
CV:PGCnp
10052GJC1CX45 | GJA7gap junction protein gamma 117q21.31CV:PGCnp
GO_Annotation
146923RUNDC1-RUN domain containing 117q21.31CV:PGCnpAscano FMRP targets
81033KCNH6ERG-2 | ERG2 | HERG2 | Kv11.2 | hERG-2potassium voltage-gated channel subfamily H member 617q23.3CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
CompositeSet
146880LOC146880-Rho GTPase activating protein 27 pseudogene17q24CV:PGCnp
DMG:Wockner_2014
3838KPNA2IPOA1 | QIP2 | RCH1 | SRP1-alpha | SRP1alphakaryopherin subunit alpha 217q24.2CV:PGCnp
DMG:Nishioka_2013
Network
10672GNA13G13G protein subunit alpha 1317q24.3CV:PGCnp
DMG:Jaffe_2016
Network
PMID:cooccur
G-PROTEIN RELAY
CompositeSet
201266SLC39A11C17orf26 | ZIP11solute carrier family 39 member 1117q24.3-q25.1CV:PGCnp
DMG:Jaffe_2016
4864NPC1NPCNiemann-Pick disease, type C118q11.2PMID:cooccur
147372CCBE1HKLLS1collagen and calcium binding EGF domains 118q21.32CV:GWASdb
CV:PGCnp
54495TMX3PDIA13 | TXNDC10thioredoxin related transmembrane protein 318q22CV:GWAScat
CV:GWASdb
CV:PGCnp
284443ZNF493-zinc finger protein 49319p12CV:PGCnp
DMG:Wockner_2014
7561ZNF14GIOT-4 | KOX6zinc finger protein 1419p13.11CV:PGCnp
DMG:Jaffe_2016
5143PDE4CDPDE1phosphodiesterase 4C19p13.11CV:PGCnp
PMID:cooccur
79939SLC35E1-solute carrier family 35 member E119p13.11DMG:Nishioka_2013
898CCNE1CCNE | pCCNE1cyclin E119q12CV:PGCnp
DMG:Montano_2016
Network
558AXLARK | JTK11 | Tyro7 | UFOAXL receptor tyrosine kinase19q13.1CV:PGCnp
DMG:Nishioka_2013
DNM:Fromer_2014
GO_Annotation
CompositeSet
11100HNRNPUL1E1B-AP5 | E1BAP5 | HNRPUL1heterogeneous nuclear ribonucleoprotein U-like 119q13.2CV:PGCnpCompositeSet
Darnell FMRP targets
51592TRIM33ECTO | PTC7 | RFG7 | TF1G | TIF1G | TIF1GAMMA | TIFGAMMAtripartite motif containing 331p13.1CV:GWAScat
CV:GWASdb
CV:PGCnp
GSMA_I
GSMA_IIA
23443SLC35A3AMRSsolute carrier family 35 member A31p21CV:PGCnp
DMG:Wockner_2014
23576DDAH1DDAH | HEL-S-16dimethylarginine dimethylaminohydrolase 11p22CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
NEUROTRANSMITTER METABOLISM
CompositeSet
22823MTF2M96 | PCL2 | TDRD19A | dJ976O13.2metal response element binding transcription factor 21p22.1CV:GWASdb
CV:PGCnp
374986FAM73AMIGA1family with sequence similarity 73 member A1p31.1CV:PGCnp
GSMA_IIA
57685CACHD1-cache domain containing 11p31.3CV:GWASdb
CV:PGCnp
GSMA_IIA
Ascano FMRP targets
6491STILMCPH7 | SILSCL/TAL1 interrupting locus1p32CV:PGCnp
DMG:Jaffe_2016
7804LRP8APOER2 | HSZ75190 | LRP-8 | MCI1LDL receptor related protein 81p34CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Network
PMID:cooccur
CompositeSet
Darnell FMRP targets
Potential synaptic genes
149175MANEAL-mannosidase endo-alpha like1p34.3CV:PGCnp
6118RPA2REPA2 | RP-A p32 | RP-A p34 | RPA32replication protein A21p35CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
65979PHACTR4PPP1R124phosphatase and actin regulator 41p35.3CV:PGCnp
DMG:Wockner_2014
57185NIPAL3DJ462O23.2 | NPAL3NIPA like domain containing 31p36.12-p35.1CV:PGCnp
DNM:Fromer_2014
CompositeSet
8718TNFRSF25APO-3 | DDR3 | DR3 | LARD | TNFRSF12 | TR3 | TRAMP | WSL-1 | WSL-LRtumor necrosis factor receptor superfamily member 251p36.2CV:PGCnp
Expression
1196CLK2-CDC like kinase 21q21CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
607BCL9LGSB-cell CLL/lymphoma 91q21CNV:YES
CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIA
PMID:cooccur
200030NBPF11NBPF24neuroblastoma breakpoint family member 111q21.1CNV:YES
100132406NBPF10AB6 | AG1 | NBPF9neuroblastoma breakpoint family member 101q21.1CNV:YES
CV:PGCnp
Expression
80896NPLC112 | C1orf13 | NAL | NPL1N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase)1q25CV:GWASdb
CV:PGCnp
PMID:cooccur
9588PRDX61-Cys | AOP2 | HEL-S-128m | NSGPx | PRX | aiPLA2 | p29peroxiredoxin 61q25.1CV:PGCnp
DNM:Xu_2012
PMID:cooccur
G2Cdb.human_mitochondria
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
3586IL10CSIF | GVHDS | IL-10 | IL10A | TGIFinterleukin 101q31-q32Association
CV:PGCnp
GO_Annotation
GR_COR
GR_Ng
GR_WM
PMID:cooccur
59349KLHL12C3IP1 | DKIRkelch like family member 121q32.1DMG:Jaffe_2016
Network
493ATP2B4ATP2B2 | MXRA1 | PMCA4 | PMCA4b | PMCA4xATPase plasma membrane Ca2+ transporting 41q32.1CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
DNM:Awadalla_2010
Network
ION BALANCE
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_PocklingtonH1
G2Cdb.human_Synaptosome
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
83593RASSF5Maxp1 | NORE1 | NORE1A | NORE1B | RAPL | RASSF3Ras association domain family member 51q32.1CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
DNM:Fromer_2014
CompositeSet
55740ENAHENA | MENA | NDPP1enabled homolog (Drosophila)1q42.12CV:PGCnp
GO_Annotation
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
3192HNRNPUHNRNPU-AS1 | HNRPU | SAF-A | SAFA | U21.1 | hnRNP Uheterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A)1q44DMG:Jaffe_2016
114548NLRP3AGTAVPRL | AII | AVP | C1orf7 | CIAS1 | CLR1.1 | FCAS | FCAS1 | FCU | MWS | NALP3 | PYPAF1NLR family, pyrin domain containing 31q44CV:PGCnp
PMID:cooccur
8455ATRNDPPT-L | MGCAattractin20p13CV:PGCnp
PMID:cooccur
10137RBM12HRIHFB2091 | SWANRNA binding motif protein 1220q11.21CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
55969C20orf24PNAS-11 | RIP5chromosome 20 open reading frame 2420q11.23CV:PGCnp
DMG:vanEijk_2014
81610FAM83DC20orf129 | CHICA | dJ616B8.3family with sequence similarity 83 member D20q11.23CV:PGCnp
1591CYP24A1CP24 | CYP24 | HCAI | P450-CC24cytochrome P450 family 24 subfamily A member 120q13CV:PGCnp
PMID:cooccur
1525CXADRCAR | CAR4/6 | HCARcoxsackie virus and adenovirus receptor21q21.1CV:PGCnp
GO_Annotation
9510ADAMTS1C3-C5 | METH1ADAM metallopeptidase with thrombospondin type 1 motif 121q21.2CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
CompositeSet
Ascano FMRP targets
54943DNAJC28C21orf55 | C21orf78DnaJ heat shock protein family (Hsp40) member C2821q22.11CV:PGCnp
DMG:Jaffe_2016
23076RRP1BKIAA0179 | NNP1L | Nnp1 | PPP1R136 | RRP1ribosomal RNA processing 1B21q22.3CV:PGCnp
DNM:Xu_2012
CompositeSet
25825BACE2AEPLC | ALP56 | ASP1 | ASP21 | BAE2 | CDA13 | CEAP1 | DRAPbeta-site APP-cleaving enzyme 221q22.3CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
8624PSMG1C21LRP | DSCR2 | LRPC21 | PAC-1 | PAC1proteasome (prosome, macropain) assembly chaperone 121q22.3CV:PGCnp
5297PI4KAPI4K-ALPHA | PIK4CA | PMGYCHA | pi4K230phosphatidylinositol 4-kinase alpha22q11.21Association
CNV:YES
CV:PGCnp
GO_Annotation
GSMA_I
PMID:cooccur
CELL METABOLISM
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
63929XPNPEP3APP3 | ICP55 | NPHPL1X-prolyl aminopeptidase 3, mitochondrial22q13.2CV:PGCnp
22934RPIARPI | RPIADribose 5-phosphate isomerase A2p11.2CV:PGCnp
DMG:Jaffe_2016
GSMA_I
2673GFPT1CMS12 | CMSTA1 | GFA | GFAT | GFAT 1 | GFAT1 | GFAT1m | GFPT | GFPT1L | MSLGglutamine--fructose-6-phosphate transaminase 12p13CV:PGCnp
GO_Annotation
Ascano FMRP targets
5013OTX1-orthodenticle homeobox 12p13CV:PGCnp
GO_Annotation
PMID:cooccur
3099HK2HKII | HXK2hexokinase 22p13CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
Ascano FMRP targets
84168ANTXR1ATR | GAPO | TEM8anthrax toxin receptor 12p13.1CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
200728TMEM17-transmembrane protein 172p15CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
87178PNPT1COXPD13 | DFNB70 | OLD35 | PNPASE | old-35polyribonucleotide nucleotidyltransferase 12p15CV:PGCnp
DMG:Nishioka_2013
2976GTF3C2TFIIIC-BETA | TFIIIC110general transcription factor IIIC subunit 22p23.3CV:PGCnp
DNM:Fromer_2014
CompositeSet
Darnell FMRP targets
114818KLHL29KBTBD9kelch like family member 292p24.1CV:PGCnp
84874ZNF514-zinc finger protein 5142q11.1CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
GSMA_I
1281COL3A1EDS4Acollagen type III alpha 12q31CV:PGCnp
DNM:Xu_2012
CompositeSet
2571GAD1CPSQ1 | GAD | SCPglutamate decarboxylase 12q31Association
Core
CV:PGCnp
GO_Annotation
GR_COR
GR_Ng
GR_WM
Network
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
10477UBE2E3UBCH9 | UbcM2ubiquitin conjugating enzyme E2 E32q32.1CV:PGCnp
DMG:Jaffe_2016
Network
142679DUSP19DUSP17 | LMWDSP3 | SKRP1 | TS-DSP1dual specificity phosphatase 192q32.1CV:PGCnp
DMG:Nishioka_2013
23314SATB2GLSSSATB homeobox 22q33CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
Chromatin Remodeling Genes
151194METTL21AFAM119A | HCA557b | HSPA-KMTmethyltransferase like 21A2q33.3CV:PGCnp
GSMA_IIA
GSMA_IIE
1385CREB1CREB | CREB-1cAMP responsive element binding protein 12q34CV:PGCnp
GSMA_IIA
GSMA_IIE
Network
PMID:cooccur
250ALPPALP | PALP | PLAP | PLAP-1alkaline phosphatase, placental2q37CV:PGCnp
55164SHQ1GRIM-1 | Shq1pSHQ1, H/ACA ribonucleoprotein assembly factor3p13CV:GWASdb
CV:PGCnp
GSMA_IIA
GSMA_IIE
26018LRIG1LIG-1 | LIG1leucine-rich repeats and immunoglobulin-like domains 13p14CV:PGCnp
DMG:Nishioka_2013
Ascano FMRP targets
9861PSMD6Rpn7 | S10 | SGA-113M | p42A | p44S10proteasome 26S subunit, non-ATPase 63p14.1CV:PGCnp
Network
7048TGFBR2AAT3 | FAA3 | LDS1B | LDS2 | LDS2B | MFS2 | RIIC | TAAD2 | TGFR-2 | TGFbeta-RIItransforming growth factor beta receptor II3p22CV:PGCnp
GO_Annotation
GSMA_I
PMID:cooccur
23180RFTN1MIG2 | PIB10 | PIG9 | RAFTLINraftlin, lipid raft linker 13p24.3CV:PGCnp
DMG:Wockner_2014
Expression
GSMA_I
Ascano FMRP targets
80746TSEN2PCH2B | SEN2 | SEN2LtRNA splicing endonuclease subunit 23p25.2CV:PGCnp
DMG:Wockner_2014
GSMA_I
57092PCNP-PEST proteolytic signal containing nuclear protein3q12.3CV:PGCnp
DMG:Jaffe_2016
GSMA_IIA
GSMA_IIE
57493HEG1HEG | MST112 | MSTP112heart development protein with EGF like domains 13q21.2CV:PGCnp
8930MBD4MED1methyl-CpG binding domain 4 DNA glycosylase3q21.3PMID:cooccurChromatin Remodeling Genes
27032ATP2C1ATP2C1A | BCPM | HHD | PMR1 | SPCA1 | hSPCA1ATPase secretory pathway Ca2+ transporting 13q22.1CV:PGCnp
DMG:vanEijk_2014
57088PLSCR4TRA1phospholipid scramblase 43q24CV:PGCnp
PMID:cooccur
205428C3orf58DIA1 | GoPro49 | HASFchromosome 3 open reading frame 583q24CV:PGCnp
DMG:Nishioka_2013
5010CLDN11OSP | OTMclaudin 113q26.2-q26.3CV:GWAScat
CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
G2Cdb.humanPSD
9076CLDN1CLD1 | ILVASC | SEMP1claudin 13q28-q29CV:GWAScat
CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
54940OCIAD1ASRIJ | OCIA | TPA018OCIA domain containing 14p11CV:PGCnp
DMG:Jaffe_2016
22998LIMCH1LIMCH1A | LMO7BLIM and calponin homology domains 14p13CV:GWASdb
CV:PGCnp
55728N4BP2B3BPNEDD4 binding protein 24p14CV:PGCnp
DMG:Wockner_2014
55300PI4K2BPI4KIIB | PIK42Bphosphatidylinositol 4-kinase type 2 beta4p15.2CV:PGCnp
DMG:Nishioka_2013
PMID:cooccur
26057ANKRD17GTAR | MASK2 | NY-BR-16ankyrin repeat domain 174q13.3CV:PGCnpCompositeSet
Darnell FMRP targets
5530PPP3CACALN | CALNA | CALNA1 | CCN1 | CNA1 | PPP2Bprotein phosphatase 3 catalytic subunit alpha4q24CV:PGCnp
GO_Annotation
Network
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
79071ELOVL6FACE | FAE | LCEELOVL fatty acid elongase 64q25CV:GWASdb
CV:PGCnp
DEG:Sanders_2013
DMG:Jaffe_2016
DMG:Wockner_2014
9871SEC24DCLCRP2SEC24 homolog D, COPII coat complex component4q26CV:PGCnp
DMG:Jaffe_2016
201799TMEM154-transmembrane protein 1544q31.3CV:GWASdb
CV:PGCnp
152503SH3D19EBP | EVE1 | Kryn | SH3P19SH3 domain containing 194q31.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
23022PALLDCGI-151 | CGI151 | MYN | PNCA1 | SIH002palladin, cytoskeletal associated protein4q32.3CV:GWAScat
CV:PGCnp
Expression
PMID:cooccur
64417C5orf28-chromosome 5 open reading frame 285p12CV:GWASdb
CV:PGCnp
10605PAIP1-poly(A) binding protein interacting protein 15p12CV:PGCnp
6502SKP2FBL1 | FBXL1 | FLB1 | p45S-phase kinase-associated protein 2, E3 ubiquitin protein ligase5p13CV:PGCnp
4552MTRRMSR | cblE5-methyltetrahydrofolate-homocysteine methyltransferase reductase5p15.31CV:PGCnp
PMID:cooccur
11082ESM1endocanendothelial cell specific molecule 15q11.2CV:PGCnp
3156HMGCRLDLCQ33-hydroxy-3-methylglutaryl-CoA reductase5q13.3-q14CV:PGCnp
DNM:Xu_2012
PMID:cooccur
CompositeSet
22936ELL2-elongation factor for RNA polymerase II 25q15CV:PGCnp
DMG:Wockner_2014
Expression
4124MAN2A1AMan II | GOLIM7 | MANA2 | MANIImannosidase alpha class 2A member 15q21.3CV:GWAScat
CV:PGC128
CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
1839HBEGFDTR | DTS | DTSF | HEGFLheparin binding EGF like growth factor5q23CV:PGCnp
GSMA_I
65983GRAMD3NS3TP2GRAM domain containing 35q23.2CV:PGCnp
GSMA_I
5813PURAMRD31 | PUR-ALPHA | PUR1 | PURALPHApurine-rich element binding protein A5q31CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
GO_Annotation
GSMA_I
PMID:cooccur
RNA AND PROTEIN SYNTHESIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
91368CDKN2AIPNL-CDKN2A interacting protein N-terminal like5q31.1CV:PGCnp
DMG:Wockner_2014
GSMA_I
6583SLC22A4OCTN1solute carrier family 22 member 45q31.1CV:PGCnp
GSMA_I
PMID:cooccur
1495CTNNA1CAP102catenin alpha 15q31.2CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_I
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Ascano FMRP targets
206358SLC36A1Dct1 | LYAAT1 | PAT1 | TRAMD3solute carrier family 36 member 15q33.1CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
26999CYFIP2PIR121cytoplasmic FMR1 interacting protein 25q33.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
80230RUFY1RABIP4 | ZFYVE12RUN and FYVE domain containing 15q35.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GSMA_IIA
Ascano FMRP targets
25862USP49-ubiquitin specific peptidase 496p21CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIE
80736SLC44A4C6orf29 | CTL4 | NG22 | TPPTsolute carrier family 44 member 46p21.3CV:PGCnp
GSMA_I
PMID:cooccur
6891TAP2ABC18 | ABCB3 | APT2 | D6S217E | PSF-2 | PSF2 | RING11transporter 2, ATP-binding cassette, sub-family B (MDR/TAP)6p21.3CV:GWASdb
CV:PGCnp
GSMA_I
PMID:cooccur
4758NEU1NANH | NEU | SIAL1neuraminidase 1 (lysosomal sialidase)6p21.3CV:PGCnp
DMG:Jaffe_2016
GSMA_I
654BMP6VGR | VGR1bone morphogenetic protein 66p24-p23CV:PGCnp
GSMA_I
PMID:cooccur
8899PRPF4BPR4H | PRP4 | PRP4H | PRP4K | dJ1013A10.1pre-mRNA processing factor 4B6p25.2CV:PGCnp
GSMA_I
135293PM20D2ACY1L2 | bA63L7.3peptidase M20 domain containing 26q15DMG:Jaffe_2016
10973ASCC3ASC1p200 | HELIC1 | RNAHactivating signal cointegrator 1 complex subunit 36q16CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
11231SEC63DNAJC23 | ERdj2 | PRO2507 | SEC63LSEC63 homolog, protein translocation regulator6q21CV:GWAScat
CV:GWASdb
CV:PGCnp
117247SLC16A10MCT10 | PRO0813 | TAT1solute carrier family 16 member 106q21CV:PGCnp
7128TNFAIP3A20 | AISBL | OTUD7C | TNFA1P2TNF alpha induced protein 36q23CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
6196RPS6KA2HU-2 | MAPKAPK1C | RSK | RSK3 | S6K-alpha | S6K-alpha2 | p90-RSK3 | p90RSK2 | pp90RSK3ribosomal protein S6 kinase A26q27CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Network
1235CCR6BN-1 | C-C CKR-6 | CC-CKR-6 | CCR-6 | CD196 | CKR-L3 | CKRL3 | CMKBR6 | DCR2 | DRY6 | GPR29 | GPRCY4 | STRL22C-C motif chemokine receptor 66q27CV:PGCnp
CV:PheWAS
10643IGF2BP3CT98 | IMP-3 | IMP3 | KOC | KOC1 | VICKZ3insulin like growth factor 2 mRNA binding protein 37p11CV:PGCnp
DMG:Jaffe_2016
1956EGFRERBB | ERBB1 | HER1 | NISBD2 | PIG61 | mENAepidermal growth factor receptor7p12Association
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Network
PMID:cooccur
3486IGFBP3BP-53 | IBP3insulin like growth factor binding protein 37p12.3CV:PGCnp
PMID:cooccur
55033FKBP14EDSKMH | FKBP22 | IPBP12FK506 binding protein 147p14.3CV:PGCnp
9586CREB5CRE-BPA | CREB-5cAMP responsive element binding protein 57p15.1CV:PGCnp
DEG:Zhao_2015
27297CRCPCGRP-RCP | CGRPRCP | RCP | RCP9CGRP receptor component7q11.21CV:PGCnp
DEG:Zhao_2015
27342RABGEF1RABEX5 | RAP1 | rabex-5RAB guanine nucleotide exchange factor (GEF) 17q11.21CV:PGCnp
DMG:Jaffe_2016
INTRACELLULAR TRAFFICKING
8321FZD1-frizzled class receptor 17q21CV:PGCnp
DMG:Nishioka_2013
10512SEMA3CSEMAE | SemEsemaphorin 3C7q21-q31CV:PGCnp
DMG:Wockner_2014
25851TECPR1-tectonin beta-propeller repeat containing 17q21.3CV:PGCnp
DMG:Wockner_2014
29990PILRBFDFACT1 | FDFACT2paired immunoglobin-like type 2 receptor beta7q22.1CV:PGCnp
DMG:Wockner_2014
8976WASLN-WASP | NWASP | WASPBWiskott-Aldrich syndrome-like7q31.3CV:PGCnpSTRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
54927CHCHD3MINOS3 | Mic19 | PPP1R22coiled-coil-helix-coiled-coil-helix domain containing 37q33CV:PGCnpG2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
800CALD1CDM | H-CAD | HCAD | L-CAD | LCAD | NAG22caldesmon 17q33CV:PGCnp
DMG:Wockner_2014
Expression
Network
136319MTPNGCDP | V-1myotrophin7q33CV:PGCnp
GO_Annotation
154791C7orf55FMC1 | HSPC268chromosome 7 open reading frame 557q34CV:PGCnp
DMG:Wockner_2014
835CASP2CASP-2 | ICH1 | NEDD-2 | NEDD2 | PPP1R57caspase 27q34-q35CV:PGCnp
2146EZH2ENX-1 | ENX1 | EZH1 | EZH2b | KMT6 | KMT6A | WVS | WVS2enhancer of zeste 2 polycomb repressive complex 2 subunit7q35-q36CV:PGCnp
DMG:Wockner_2014
Network
Chromatin Remodeling Genes
6867TACC1Ga55transforming acidic coiled-coil containing protein 18p11.22CV:PGCnp
DMG:Wockner_2014
80223RAB11FIP1NOEL1A | RCP | rab11-FIP1RAB11 family interacting protein 1 (class I)8p11.22CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
5327PLATT-PA | TPAplasminogen activator, tissue type8p12CV:PGCnp
DMG:Wockner_2014
Expression
GO_Annotation
PMID:cooccur
Potential synaptic genes
55872PBKCT84 | HEL164 | Nori-3 | SPK | TOPKPDZ binding kinase8p21.2CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
Network
9583ENTPD4LALP70 | LAP70 | LYSAL1 | NTPDase-4 | UDPaseectonucleoside triphosphate diphosphohydrolase 48p21.3CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
9639ARHGEF10GEF10 | SNCVRho guanine nucleotide exchange factor 108p23Association
CV:PGCnp
DMG:Wockner_2014
DNM:Xu_2012
PMID:cooccur
CompositeSet
66036MTMR9C8orf9 | LIP-STYX | MTMR8myotubularin related protein 98p23-p22CV:GWAScat
CV:PGCnp
6386SDCBPMDA-9 | MDA9 | ST1 | SYCL | TACIP18syndecan binding protein8q12CV:PGCnp
DMG:Nishioka_2013
GO_Annotation
Network
Potential synaptic genes
152006RNF38-ring finger protein 389p13CV:GWASdb
CV:PGCnp
8434RECKST15reversion inducing cysteine rich protein with kazal motifs9p13.3CV:PGCnp
DNM:Xu_2012
PMID:cooccur
CompositeSet
25853DCAF12CT102 | KIAA1892 | TCC52 | WDR40ADDB1 and CUL4 associated factor 129p13.3CV:PGCnp
DMG:Jaffe_2016
Expression
48ACO1ACONS | HEL60 | IREB1 | IREBP | IREBP1 | IRP1aconitase 19p21.1CV:PGCnp
DNM:Fromer_2014
CompositeSet
6619SNAPC3PTFbeta | SNAP50small nuclear RNA activating complex polypeptide 39p22.3CV:GWASdb
CV:PGCnp
10558SPTLC1HSAN1 | HSN1 | LBC1 | LCB1 | SPT1 | SPTIserine palmitoyltransferase long chain base subunit 19q22.2CV:GWAScat
CV:GWASdb
CV:PGCnp
23196FAM120AC9orf10 | DNAPTP1 | DNAPTP5 | OSSAfamily with sequence similarity 120A9q22.31CV:PGCnpCompositeSet
Darnell FMRP targets
403341ZBTB34ZNF918zinc finger and BTB domain containing 349q33.3CV:PGCnp
64061TSPYL2CDA1 | CINAP | CTCL | DENTT | HRIHFB2216 | NP79 | SE204 | TSPXTSPY-like 2Xp11.2DNM:Fromer_2014
PMID:cooccur
CompositeSet
6990DYNLT3RP3 | TCTE1L | TCTEX1Ldynein light chain Tctex-type 3Xp21CV:PGCnp
DEG:Zhao_2015
Potential synaptic genes
84061MAGT1IAP | MRX95 | OST3B | PRO0756 | XMEN | bA217H1.1magnesium transporter 1Xq21.1CV:PGCnp
DNM:Fromer_2014
CompositeSet
3251HPRT1HGPRT | HPRThypoxanthine phosphoribosyltransferase 1Xq26.1CV:PGCnp
DMG:vanEijk_2014
GO_Annotation
Network
PMID:cooccur