Search results: The pahtway p4454 has 317 genes in the original annotation. Currently, there are 190 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group ? Functional group ?
84640USP38HP43.8KDubiquitin specific peptidase 38-CV:PGCnp
DMG:vanEijk_2014
80314EPC1Epl1enhancer of polycomb homolog 110p11CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
PMID:cooccur
CompositeSet
9317PTERHPHRP | RPR-1phosphotriesterase related10p12CV:PGCnp
PMID:cooccur
22921MSRB2CBS-1 | CBS1 | CGI-131 | MSRB | PILBmethionine sulfoxide reductase B210p12CV:PGCnp
PMID:cooccur
51322WACBM-016 | DESSH | PRO1741 | Wwp4WW domain containing adaptor with coiled-coil10p12.1|10p12.1-p11.2CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
55691FRMD4ACCAFCA | FRMD4 | bA295P9.4FERM domain containing 4A10p13CV:PGCnp
CV:PheWAS
DMG:Wockner_2014
1592CYP26A1CP26 | CYP26 | P450RAI | P450RAI1cytochrome P450 family 26 subfamily A member 110q23-q24CV:PGCnp
GO_Annotation
PMID:cooccur
57559STAMBPL1ALMalpha | AMSH-FP | AMSH-LP | bA399O19.2STAM binding protein like 110q23.31DMG:Jaffe_2016
10580SORBS1CAP | FLAF2 | R85FL | SH3D5 | SH3P12 | SORB1sorbin and SH3 domain containing 110q23.33CV:PGCnp
DMG:Wockner_2014
PROTEIN CLUSTERING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
84108PCGF6MBLR | RNF134polycomb group ring finger 610q24.33CV:PGCnp
LK:YES
9126SMC3BAM | BMH | CDLS3 | CSPG6 | HCAP | SMC3L1structural maintenance of chromosomes 310q25CV:PGCnp
Network
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
6506SLC1A2EAAT2 | GLT-1 | HBGTsolute carrier family 1 member 211p13Association
CV:GWASdb
CV:PGCnp
Expression
GO_Annotation
GR_COR
GR_Ng
GR_WM
PMID:cooccur
NEUROTRANSMITTER METABOLISM
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
22800RRAS2TC21related RAS viral (r-ras) oncogene homolog 211p15.2CV:PGCnp
DMG:Wockner_2014
28992MACROD1LRP16MACRO domain containing 111q11CV:PGCnp
79026AHNAKAHNAKRSAHNAK nucleoprotein11q12.2CV:PGCnp
DMG:Nishioka_2013
DMG:vanEijk_2014
DMG:Wockner_2014
GO_Annotation
CompositeSet
Ascano FMRP targets
10008KCNE3HOKPP | HYPP | MiRP2potassium voltage-gated channel subfamily E regulatory subunit 311q13.4CV:PGCnpEXCITABILITY
26973CHORDC1CHP1cysteine and histidine rich domain containing 111q14.3CV:PGCnp
DMG:Wockner_2014
91801ALKBH8ABH8 | TRM9 | TRMT9alkB homolog 8, tRNA methyltransferase11q22.3CV:PGCnp
DMG:vanEijk_2014
GSMA_I
80824DUSP16MKP-7 | MKP7dual specificity phosphatase 1612p13CV:PGCnp
4908NTF3HDNF | NGF-2 | NGF2 | NT-3 | NT3neurotrophin 312p13Association
CV:PGCnp
GO_Annotation
GR_Ng
GR_WM
PMID:cooccur
339APOBEC1APOBEC-1 | BEDP | CDAR1 | HEPRapolipoprotein B mRNA editing enzyme catalytic subunit 112p13.1CV:PGCnp
6472SHMT2GLYA | HEL-S-51e | SHMTserine hydroxymethyltransferase 212q12-q14CV:GWAScat
CV:PGC128
CV:PGCnp
4035LRP1A2MR | APOER | APR | CD91 | IGFBP3R | LRP | LRP1A | TGFBR5LDL receptor related protein 112q13.3CV:PGCnp
DNM:Girard_2011
Network
PMID:cooccur
CELL METABOLISM
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
8445DYRK2-dual specificity tyrosine phosphorylation regulated kinase 212q15CV:PGCnp
DMG:Montano_2016
117177RAB3IPRABIN3 | RABIN8RAB3A interacting protein12q15CV:PGCnp
91298C12orf29-chromosome 12 open reading frame 2912q21.32CV:PGCnp
79023NUP37p37nucleoporin 37kDa12q23.2CV:PGCnp
DNM:Fromer_2014
CompositeSet
29915HCFC2HCF-2 | HCF2host cell factor C212q23.3CV:PGCnp
PMID:cooccur
6175RPLP0L10E | LP0 | P0 | PRLP0 | RPP0ribosomal protein lateral stalk subunit P012q24.2DMG:Jaffe_2016
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
353116RILPL1GOSPEL | RLP1Rab interacting lysosomal protein-like 112q24.31CV:PGCnp
79720VPS37B-VPS37B, ESCRT-I subunit12q24.31CV:PGCnp
DMG:Montano_2016
DMG:vanEijk_2014
DMG:Wockner_2014
55596ZCCHC8-zinc finger CCHC-type containing 812q24.31CV:PGCnp
6445SGCG35DAG | A4 | DAGA4 | DMDA | DMDA1 | LGMD2C | MAM | SCARMD2 | SCG3 | gamma-SGsarcoglycan gamma13q12CV:PGCnp
222484LNX2PDZRN1ligand of numb-protein X 213q12.2CV:GWAScat
CV:GWASdb
CV:PGCnp
3839KPNA3IPOA4 | SRP1 | SRP1gamma | SRP4 | hSRP1karyopherin subunit alpha 313q14.3Association
CV:GWASdb
CV:PGCnp
PMID:cooccur
2974GUCY1B2GC-SB2guanylate cyclase 1, soluble, beta 2 (pseudogene)13q14.3CV:PGCnp
PMID:cooccur
54602NDFIP2N4WBP5ANedd4 family interacting protein 213q31.1CV:PGCnp
DMG:Wockner_2014
10253SPRY2IGAN3 | hSPRY2sprouty RTK signaling antagonist 213q31.1CV:PGCnp
PMID:cooccur
26277TINF2DKCA3 | TIN2TERF1 (TRF1)-interacting nuclear factor 214q12CV:PGCnp
DNM:Fromer_2014
GSMA_I
CompositeSet
80821DDHD1PA-PLA1 | PAPLA1 | SPG28DDHD domain containing 114q21CV:PGCnpAscano FMRP targets
122769LRR14-1BBLRR | LRR-1 | PPIL5leucine rich repeat protein 114q21.3CV:PGCnp
55172DNAAF2C14orf104 | CILD10 | KTU | PF13dynein (axonemal) assembly factor 214q21.3CV:PGCnp
Expression
57544TXNDC16ERp90 | KIAA1344thioredoxin domain containing 1614q22.1CV:PGCnp
DMG:Jaffe_2016
7597ZBTB25C14orf51 | KUP | ZNF46zinc finger and BTB domain containing 2514q23-q24CV:PGCnp
DMG:Wockner_2014
9517SPTLC2HSN1C | LCB2 | LCB2A | NSAN1C | SPT2 | hLCB2aserine palmitoyltransferase long chain base subunit 214q24.3CV:PGCnp
Expression
PMID:cooccur
Ascano FMRP targets
27030MLH3HNPCC7mutL homolog 314q24.3CV:PGCnp
DMG:vanEijk_2014
GO_Annotation
6218RPS17DBA4 | RPS17L | RPS17L1 | RPS17L2 | S17ribosomal protein S1715qPMID:cooccurG2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
8773SNAP23HsT17016 | SNAP-23 | SNAP23A | SNAP23Bsynaptosome associated protein 23kDa15q14CV:PGCnp
GO_Annotation
Network
EXOCYTOSIS
4130MAP1AMAP1L | MTAP1Amicrotubule associated protein 1A15q15.3CV:PGCnp
Network
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_mGluR5
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
54778RNF111ARKring finger protein 11115q21CV:PGCnp
6095RORANR1F1 | ROR1 | ROR2 | ROR3 | RZR-ALPHA | RZRARAR related orphan receptor A15q22.2CV:GWAScat
CV:GWASdb
CV:PGCnp
Expression
PMID:cooccur
4091SMAD6AOVD2 | HsT17432 | MADH6 | MADH7SMAD family member 615q22.31CV:PGCnp
DMG:Wockner_2014
1106CHD2EEOCchromodomain helicase DNA binding protein 215q26CV:PGCnp
2242FESFPSFES proto-oncogene, tyrosine kinase15q26.1CV:PGCnp
DMG:Montano_2016
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
3480IGF1RCD221 | IGFIR | IGFR | JTK13insulin like growth factor 1 receptor15q26.3CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Network
PMID:cooccur
Ascano FMRP targets
388272C16orf87-chromosome 16 open reading frame 8716q11.2CV:PGCnp
DMG:Jaffe_2016
51388NIP7CGI-37 | HSPC031 | KD93NIP7, nucleolar pre-rRNA processing protein16q22.1CV:PGCnp
DNM:McCarthy_2014
83449PMFBP1-polyamine modulated factor 1 binding protein 116q22.2CV:PGCnp
DNM:Fromer_2014
CompositeSet
23174ZCCHC14BDG-29 | BDG29zinc finger CCHC-type containing 1416q24.2CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
29123ANKRD11ANCO-1 | ANCO1 | LZ16 | T13ankyrin repeat domain 1116q24.3CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
81620CDT1DUP | RIS2chromatin licensing and DNA replication factor 116q24.3CV:PGCnp
2622GAS8CILD33 | DRC4 | GAS11growth arrest specific 816q24.3CV:PGCnp
4597MVDFP17780 | MDDase | MPD | POROK7mevalonate diphosphate decarboxylase16q24.3CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
27077B9D1B9 | EPPB9 | MKS9 | MKSR1B9 protein domain 117p11.2CV:PGCnp
DMG:Wockner_2014
124944C17orf49BAP18 | HEPISchromosome 17 open reading frame 4917p13.1DNM:Xu_2012CompositeSet
7326UBE2G1E217K | UBC7 | UBE2Gubiquitin conjugating enzyme E2 G117p13.2CV:PGCnp
56919DHX33DDX33DEAH-box helicase 3317p13.2CV:PGCnpAscano FMRP targets
11072DUSP14MKP-L | MKP6dual specificity phosphatase 1417q12CNV:YES
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
6871TADA2AADA2 | ADA2A | KL04P | TADA2L | hADA2transcriptional adaptor 2A17q12-q21CNV:YES
CV:PGCnp
113026PLCD3PLC-delta-3phospholipase C delta 317q21.31CV:PGCnpG2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
11248NXPH3NPH3neurexophilin 317q21.33DMG:Jaffe_2016
GO_Annotation
348235SKA2FAM33Aspindle and kinetochore associated complex subunit 217q22CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
64750SMURF2-SMAD specific E3 ubiquitin protein ligase 217q22-q23CV:PGCnp
DMG:Jaffe_2016
10040TOM1L1OK/KNS-CL.3 | SRCASMtarget of myb1 like 1 membrane trafficking protein17q23.2CV:PGCnp
3607FOXK2ILF | ILF-1 | ILF1forkhead box K217q25CV:PGCnp
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
2125EVPLEVPKenvoplakin17q25.1CV:GWASdb
CV:PGCnp
79058ASPSCR1ASPCR1 | ASPL | ASPS | RCC17 | TUG | UBXD9 | UBXN9alveolar soft part sarcoma chromosome region, candidate 117q25.3CV:PGCnp
9021SOCS3ATOD4 | CIS3 | Cish3 | SOCS-3 | SSI-3 | SSI3suppressor of cytokine signaling 317q25.3CV:PGCnp
PMID:cooccur
56984PSMG2CLAST3 | HCCA3 | HsT1707 | MDS003 | PAC2 | TNFSF5IP1proteasome (prosome, macropain) assembly chaperone 218p11.21CV:GWASdb
CV:PGCnp
9150CTDP1CCFDN | FCP1CTD phosphatase subunit 118q23CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
115098CCDC124-coiled-coil domain containing 12419p13.11CV:PGCnp
DMG:vanEijk_2014
81576CCDC130-coiled-coil domain containing 13019p13.2CV:PGCnp
7392USF2FIP | bHLHb12upstream transcription factor 2, c-fos interacting19q13CV:PGCnp
DMG:Wockner_2014
808CALM3HEL-S-72 | PHKD | PHKD3calmodulin 3 (phosphorylase kinase, delta)19q13.2-q13.3CV:PGCnpINTRACELLULAR SIGNAL TRANSDUCTION
SEROTONIN
CompositeSet
Darnell FMRP targets
51070NOSIPCGI-25nitric oxide synthase interacting protein19q13.33CV:PGCnp
DMG:Jaffe_2016
9422ZNF264-zinc finger protein 26419q13.4DMG:Jaffe_2016
23640HSPBP1FES1HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 119q13.42CV:PGCnp
6913TBX15TBX14T-box 151p11.1CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_I
GSMA_IIA
5825ABCD3ABC43 | CBAS5 | PMP70 | PXMP1 | ZWS2ATP binding cassette subfamily D member 31p21.3CV:PGCnp
DMG:Jaffe_2016
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
2672GFI1GFI-1 | GFI1A | SCN2 | ZNF163growth factor independent 1 transcription repressor1p22CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Montano_2016
8412BCAR3NSP2 | SH2D3Bbreast cancer anti-estrogen resistance 31p22.1CV:PGCnp
DNM:Fromer_2014
8880FUBP1FBP | FUBP | hDH Vfar upstream element binding protein 11p31.1CV:PGCnp
GSMA_IIA
8289ARID1AB120 | BAF250 | BAF250a | BM029 | C1orf4 | ELD | MRD14 | OSA1 | P270 | SMARCF1 | hELD | hOSA1AT-rich interaction domain 1A1p35.3CV:PGCnpCompositeSet
Darnell FMRP targets
Chromatin Remodeling Genes
23028KDM1AAOF2 | BHC110 | CPRF | KDM1 | LSD1lysine demethylase 1A1p36.12CV:PGCnp
PMID:cooccur
Ascano FMRP targets
Chromatin Remodeling Genes
54455FBXO42Fbx42 | JFKF-box protein 421p36.23-p36.11CV:PGCnp
27246RNF115BCA2 | ZNF364ring finger protein 1151q21.1CNV:YES
CV:PGCnp
10500SEMA6CSEMAY | m-SemaY | m-SemaY2semaphorin 6C1q21.2CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_I
GSMA_IIA
10654PMVKHUMPMKI | PMK | PMKA | PMKASE | POROK1phosphomevalonate kinase1q22CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
57111RAB25CATX-8 | RAB11CRAB25, member RAS oncogene family1q22CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIA
INTRACELLULAR TRAFFICKING
84919PPP1R15BCREP | MSSGM2protein phosphatase 1 regulatory subunit 15B1q32.1CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
83593RASSF5Maxp1 | NORE1 | NORE1A | NORE1B | RAPL | RASSF3Ras association domain family member 51q32.1CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
DNM:Fromer_2014
CompositeSet
29937NENFCIR2 | SCIRP10 | SPUFneudesin neurotrophic factor1q32.3CV:PGCnp
DMG:Jaffe_2016
3776KCNK2K2p2.1 | TPKC1 | TREK | TREK-1 | TREK1 | hTREK-1c | hTREK-1epotassium two pore domain channel subfamily K member 21q41CV:PGCnp
DMG:Jaffe_2016
Expression
9156EXO1HEX1 | hExoIexonuclease 11q43CV:GWASdb
CV:PGCnp
140733MACROD2C20orf133MACRO domain containing 220p12.1CV:GWASdb
CV:PGCnp
CV:PheWAS
DMG:Jaffe_2016
GSMA_I
PMID:cooccur
64096GFRA4-GDNF family receptor alpha 420p13-p12CV:PGCnp
DMG:Wockner_2014
23054NCOA6AIB3 | ASC2 | NRC | PRIP | RAP250 | TRBPnuclear receptor coactivator 620q11CV:PGCnp
GO_Annotation
CompositeSet
Darnell FMRP targets
23613ZMYND8PRKCBP1 | PRO2893 | RACK7zinc finger MYND-type containing 820q13.12CV:PGCnp
Network
55544RBM38HSRNASEB | RNPC1 | SEB4B | SEB4D | dJ800J21.2RNA binding motif protein 3820q13.31CV:GWASdb
CV:PGCnp
5594MAPK1ERK | ERK-2 | ERK2 | ERT1 | MAPK2 | P42MAPK | PRKM1 | PRKM2 | p38 | p40 | p41 | p41mapk | p42-MAPKmitogen-activated protein kinase 122q11.21CV:PGCnp
GO_Annotation
GSMA_I
Network
PMID:cooccur
CANABINOID
INTRACELLULAR SIGNAL TRANSDUCTION
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
9647PPM1FCAMKP | CaMKPase | FEM-2 | POPX2 | hFEM-2protein phosphatase, Mg2+/Mn2+ dependent 1F22q11.22CV:GWASdb
CV:PGCnp
GSMA_I
11020IFT27BBS19 | RABL4 | RAYLintraflagellar transport 2722q13.1CV:GWASdb
CV:PGCnp
84913ATOH8HATH6 | bHLHa21atonal bHLH transcription factor 82p11.2CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
GSMA_I
4528MTIF2-mitochondrial translational initiation factor 22p16.1CV:PGCnp
DMG:Nishioka_2013
PMID:cooccur
80745THUMPD2C2orf8THUMP domain containing 22p22.1|2p22-p21CV:PGCnp
55676SLC30A6MST103 | MSTP103 | ZNT6solute carrier family 30 member 62p22.3CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
ION BALANCE
22950SLC4A1APHLC3solute carrier family 4 member 1 adaptor protein2p23.3CV:PGCnp
DMG:Jaffe_2016
Ascano FMRP targets
79677SMC6SMC-6 | SMC6L1 | hSMC6structural maintenance of chromosomes 62p24.2CV:PGCnpAscano FMRP targets
3241HPCAL1BDR1 | HLP2 | VILIP-3hippocalcin like 12p25.1CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
INTRACELLULAR SIGNAL TRANSDUCTION
1876E2F6E2F-6E2F transcription factor 62p25.1CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
9392TGFBRAP1TRAP-1 | TRAP1 | VPS3transforming growth factor beta receptor associated protein 12q12.1CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIA
376940ZC3H6ZC3HDC6zinc finger CCCH-type containing 62q13CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
GSMA_I
GSMA_IIA
CompositeSet
51141INSIG2-insulin induced gene 22q14.2CV:PGCnp
GR_Ng
GSMA_I
GSMA_IIA
PMID:cooccur
4703NEBNEB177D | NEM2nebulin2q22CV:PGCnp
DNM:Fromer_2014
DNM:Gulsuner_2013
GSMA_IIA
PMID:cooccur
CompositeSet
90ACVR1ACTRI | ACVR1A | ACVRLK2 | ALK2 | FOP | SKR1 | TSRIactivin A receptor type 12q23-q24CV:PGCnp
GSMA_IIA
PMID:cooccur
151188ARL6IP6AIP-6 | AIP6 | PFAAP1ADP ribosylation factor like GTPase 6 interacting protein 62q23.3CV:PGCnp
GSMA_IIA
7273TTNCMD1G | CMH9 | CMPD4 | EOMFC | HMERF | LGMD2J | MYLK5 | TMDtitin2q31CV:PGCnp
DNM:Fromer_2014
DNM:McCarthy_2014
Network
CompositeSet
6741SSBLARP3 | La | La/SSBSjogren syndrome antigen B2q31.1CV:PGCnp
PMID:cooccur
Ascano FMRP targets
25843MOB42C4D | CGI-95 | MOB1 | MOB3 | MOBKL3 | PHOCN | PREI3MOB family member 4, phocein2q33.1CV:PGCnp
Expression
4133MAP2MAP2A | MAP2B | MAP2Cmicrotubule associated protein 22q34-q35CV:PGCnp
GR_Ng
GSMA_IIA
GSMA_IIE
Network
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_mGluR5
G2Cdb.humanNRC
CompositeSet
Darnell FMRP targets
Potential synaptic genes
2043EPHA4HEK8 | SEK | TYRO1EPH receptor A42q36.1CV:PGCnp
GSMA_IIA
GSMA_IIE
PMID:cooccur
TYROSINE KINASE SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
285193DUSP28DUSP26 | VHPdual specificity phosphatase 282q37.3DMG:vanEijk_2014
23024PDZRN3LNX3 | SEMACAP3 | SEMCAP3PDZ domain containing ring finger 33p13CV:PGCnp
DNM:Ambalavanan_2016
GSMA_IIA
GSMA_IIE
26018LRIG1LIG-1 | LIG1leucine-rich repeats and immunoglobulin-like domains 13p14CV:PGCnp
DMG:Nishioka_2013
Ascano FMRP targets
166336PRICKLE2EPM5prickle planar cell polarity protein 23p14.1CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
4134MAP4-microtubule associated protein 43p21CV:PGCnpG2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
10180RBM63G2 | DEF-3 | DEF3 | HLC-11 | NY-LU-12 | g16RNA binding motif protein 63p21.3CV:PGCnp
10217CTDSPLC3orf8 | HYA22 | PSR1 | RBSP3 | SCP3CTD small phosphatase like3p21.3CV:PGCnp
GSMA_I
11277TREX1AGS1 | CRV | DRN3 | HERNSthree prime repair exonuclease 13p21.31DMG:Wockner_2014
375341C3orf62-chromosome 3 open reading frame 623p21.31CV:PGCnp
DMG:Wockner_2014
64422ATG3APG3 | APG3-LIKE | APG3L | PC3-96autophagy related 33q13.2CV:GWASdb
CV:PGCnp
GSMA_IIA
GSMA_IIE
26984SEC22ASEC22L2SEC22 homolog A, vesicle trafficking protein3q21.1CV:PGCnp
84303CHCHD6CHCM1 | Mic25 | PPP1R23coiled-coil-helix-coiled-coil-helix domain containing 63q21.3CV:PGCnp
DMG:Wockner_2014
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_mitochondria
CompositeSet
5291PIK3CBP110BETA | PI3K | PI3KBETA | PIK3C1phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta3q22.3CV:PGCnp
DNM:Girard_2011
Network
CompositeSet
349565NMNAT3FKSG76 | PNAT-3 | PNAT3nicotinamide nucleotide adenylyltransferase 33q23CV:PGCnp
29970SCHIP1SCHIP-1schwannomin interacting protein 13q25.32-q25.33CV:PGCnp
DMG:Wockner_2014
1894ECT2ARHGEF31epithelial cell transforming 23q26.1-q26.2CV:PGCnp
2119ETV5ERMETS variant 53q28CV:PGCnp
DMG:Wockner_2014
55276PGM2MSTP006phosphoglucomutase 24p14CV:GWASdb
CV:PGCnp
CELL METABOLISM
11107PRDM5BCS2 | PFM2PR domain 54q27CV:PGCnp
DMG:Wockner_2014
25836NIPBLCDLS | CDLS1 | IDN3 | IDN3-B | Scc2Nipped-B homolog (Drosophila)5p13.2CV:PGCnp
DNM:Fromer_2014
PMID:cooccur
CompositeSet
57491AHRRAHH | AHHR | bHLHe77aryl-hydrocarbon receptor repressor5p15.3CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
84246MED10L6 | NUT2 | TRG20mediator complex subunit 105p15.31CV:GWASdb
CV:PGCnp
79888LPCAT1AGPAT10 | AGPAT9 | AYTL2 | PFAAP3 | lpcatlysophosphatidylcholine acyltransferase 15p15.33CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
79810PTCD2-pentatricopeptide repeat domain 25q13.2CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
401207C5orf63YDR286Cchromosome 5 open reading frame 635q23.2CV:PGCnp
340061TMEM173ERIS | MITA | MPYS | NET23 | SAVI | STING | hMITA | hSTINGtransmembrane protein 1735q31.2CV:PGCnp
DMG:Montano_2016
GSMA_I
2878GPX3GPx-P | GSHPx-3 | GSHPx-Pglutathione peroxidase 35q33.1CV:GWASdb
CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
134510UBLCP1CPUB1ubiquitin like domain containing CTD phosphatase 15q33.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIA
GSMA_IIE
27430MAT2BMAT-II | MATIIbeta | Nbla02999 | SDR23E1 | TGRmethionine adenosyltransferase 2B5q34CV:PGCnp
DMG:Jaffe_2016
GSMA_IIA
GSMA_IIE
6793STK10LOK | PRO2729serine/threonine kinase 105q35.1CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
DNM:Fromer_2014
GSMA_IIA
CompositeSet
6992PPP1R11CFAP255 | HCG-V | HCGV | IPP3 | TCTE5 | TCTEX5protein phosphatase 1 regulatory inhibitor subunit 116p21.3GSMA_I
PMID:cooccur
7726TRIM26AFP | RNF95 | ZNF173tripartite motif containing 266p21.3CV:GWAScat
CV:GWASdb
CV:PGCnp
GSMA_I
PMID:cooccur
1871E2F3E2F-3E2F transcription factor 36p22CV:PGCnp
DMG:Jaffe_2016
GSMA_I
79897RPP21C6orf135 | CAT60ribonuclease P/MRP 21kDa subunit6p22.1GSMA_I
9425CDYLCDYL1chromodomain protein, Y-like6p25.1CV:PGCnp
GSMA_I
23469PHF3-PHD finger protein 36q12CV:PGCnp
60682SMAP1SMAP-1small ArfGAP 16q13CV:PGCnp
55788LMBRD1C6orf209 | LMBD1 | MAHCF | NESILMBR1 domain containing 16q13CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
9994CASP8AP2CED-4 | FLASH | RIP25caspase 8 associated protein 26q15CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
2898GRIK2EAA4 | GLR6 | GLUK6 | GLUR6 | GluK2 | MRT6glutamate ionotropic receptor kainate type subunit 26q16.3Association
CV:GWASdb
CV:PGCnp
GO_Annotation
Network
PMID:cooccur
LIGAND GATED ION SIGNALING
G2Cdb.human_PocklingtonH1
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
Potential synaptic genes
26271FBXO5EMI1 | FBX5 | Fbxo31F-box protein 56q25.2CV:GWASdb
CV:PGCnp
9444QKIHqk | QK | QK1 | QK3 | hqkIQKI, KH domain containing, RNA binding6q26CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
Darnell FMRP targets
9734HDAC9HD7 | HD7b | HD9 | HDAC | HDAC7 | HDAC7B | HDAC9B | HDAC9FL | HDRP | MITRhistone deacetylase 97p21.1CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
Chromatin Remodeling Genes
54476RNF216CAHH | TRIAD3 | U7I1 | UBCE7IP1 | ZINring finger protein 2167p22.1CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
51530ZC3HC1HSPC216 | NIPAzinc finger C3HC-type containing 17q32.2CV:GWASdb
CV:PGCnp
800CALD1CDM | H-CAD | HCAD | L-CAD | LCAD | NAG22caldesmon 17q33CV:PGCnp
DMG:Wockner_2014
Expression
Network
27257LSM1CASM | YJL124CLSM1 homolog, mRNA degradation associated8p11.2CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
5327PLATT-PA | TPAplasminogen activator, tissue type8p12CV:PGCnp
DMG:Wockner_2014
Expression
GO_Annotation
PMID:cooccur
Potential synaptic genes
54984PINX1LPTL | LPTSPIN2/TERF1 interacting, telomerase inhibitor 18p23CV:PGCnp
Network
2055CLN8C8orf61 | EPMRceroid-lipofuscinosis, neuronal 88p23CV:PGCnp
DMG:Wockner_2014
GO_Annotation
55284UBE2WUBC-16 | UBC16ubiquitin conjugating enzyme E2 W (putative)8q21.11CV:PGCnp
DMG:Jaffe_2016
9134CCNE2CYCE2cyclin E28q22.1DMG:Jaffe_2016
9166EBAG9EB9 | PDAFestrogen receptor binding site associated, antigen, 98q23CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
50807ASAP1AMAP1 | CENTB4 | DDEF1 | PAG2 | PAP | ZG14PArfGAP with SH3 domain, ankyrin repeat and PH domain 18q24.1-q24.2CV:GWASdb
CV:PGCnp
DNM:Fromer_2014
CompositeSet
138241C9orf85-chromosome 9 open reading frame 859q21.13CV:PGCnp
10383TUBB4BBeta2 | TUBB2 | TUBB2Ctubulin beta 4B class IVb9q34CV:PGCnpSTRUCTURAL PLASTICITY
7186TRAF2MGC:45012 | TRAP | TRAP3TNF receptor associated factor 29q34CV:PGCnp
Network
PMID:cooccur
Ascano FMRP targets
1741DLG3MRX | MRX90 | NEDLG | PPP1R82 | SAP102 | XLMRdiscs large homolog 3Xq13.1CV:PGCnp
Network
PMID:cooccur
PROTEIN CLUSTERING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_PocklingtonH1
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Potential synaptic genes
546ATRXATR2 | JMS | MRX52 | MRXHF1 | RAD54 | RAD54L | SFM1 | SHS | XH2 | XNP | ZNF-HXalpha thalassemia/mental retardation syndrome X-linkedXq21.1CV:PGCnp
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
Chromatin Remodeling Genes