Search results: The pahtway p2169 has 380 genes in the original annotation. Currently, there are 213 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group ? Functional group ?
11155LDB3CMD1C | CMH24 | CMPD3 | CYPHER | LDB3Z1 | LDB3Z4 | LVNC3 | MFM4 | ORACLE | PDLIM6 | ZASPLIM domain binding 310q22.3-q23.2CV:PGCnp
DMG:Wockner_2014
GO_Annotation
1892ECHS1ECHS1D | SCEHenoyl-CoA hydratase, short chain, 1, mitochondrial10q26.2-q26.3CV:PGCnp
GSMA_IIA
Network
4038LRP4CLSS | CMS17 | LRP-4 | LRP10 | MEGF7 | SOST2LDL receptor related protein 411p11.2CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
GO_Annotation
PMID:cooccur
CompositeSet
Ascano FMRP targets
5682PSMA1HC2 | HEL-S-275 | NU | PROS30proteasome subunit alpha 111p15.1CV:PGCnp
DMG:Jaffe_2016
Network
5719PSMD13HSPC027 | Rpn9 | S11 | p40.5proteasome 26S subunit, non-ATPase 1311p15.5DEG:Maycox_2009
54663WDR74-WD repeat domain 7411q12.3CV:PGCnp
DMG:Wockner_2014
8061FOSL1FRA | FRA1 | fra-1FOS like antigen 111q13CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
2950GSTP1DFN7 | FAEES3 | GST3 | GSTP | HEL-S-22 | PIglutathione S-transferase pi 111q13CV:PGCnp
GO_Annotation
PMID:cooccur
CELL METABOLISM
9600PITPNM1DRES9 | NIR2 | PITPNM | RDGB | RDGB1 | RDGBA | RDGBA1 | Rd9phosphatidylinositol transfer protein membrane associated 111q13CV:PGCnp
DMG:Wockner_2014
DNM:McCarthy_2014
DNM:Xu_2012
GO_Annotation
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
9973CCS-copper chaperone for superoxide dismutase11q13CV:PGCnp
PMID:cooccur
9610RIN1-Ras and Rab interactor 111q13.2CV:PGCnp
9049AIPARA9 | FKBP16 | FKBP37 | SMTPHN | XAP-2 | XAP2aryl hydrocarbon receptor interacting protein11q13.3CV:PGCnp
PMID:cooccur
51503CWC15AD002 | C11orf5 | Cwf15 | HSPC148 | ORF5CWC15 spliceosome-associated protein11q21CV:PGCnp
DMG:Jaffe_2016
3359HTR3A5-HT-3 | 5-HT3A | 5-HT3R | 5HT3R | HTR35-hydroxytryptamine receptor 3A11q23.1ADT:Sun_2012
Association
CV:PGCnp
GO_Annotation
GR_COR
GR_Ng
GR_WM
GSMA_I
PMID:cooccur
LIGAND GATED ION SIGNALING
64221ROBO3HGPPS | HGPS | RBIG1 | RIG1roundabout guidance receptor 311q24.2CV:PGCnp
DMG:Wockner_2014
GO_Annotation
8079MLF2NTN4myeloid leukemia factor 212p13CV:PGCnp
DEG:Zhao_2015
DMG:vanEijk_2014
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
6515SLC2A3GLUT3solute carrier family 2 member 312p13.3CV:PGCnp
PMID:cooccur
CELL METABOLISM
466ATF1EWS-ATF1 | FUS/ATF-1 | TREB36activating transcription factor 112q13CV:PGCnp
140461ASB8PP14212ankyrin repeat and SOCS box containing 812q13.11CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
517ATP5G2ATP5AATP synthase, H+ transporting, mitochondrial Fo complex subunit C2 (subunit 9)12q13.13CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Expression
1634DCNCSCD | DSPG2 | PG40 | PGII | PGS2 | SLRR1Bdecorin12q21.33CV:PGCnp
Network
121457IKBIPIKIPIKBKB interacting protein12q23.1CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
CompositeSet
326625MMABATR | CFAP23 | cblB | cobmethylmalonic aciduria (cobalamin deficiency) cblB type12q24CV:PGCnp
DMG:Jaffe_2016
51228GLTP-glycolipid transfer protein12q24.11CV:PGCnp
10094ARPC3ARC21 | p21-Arcactin related protein 2/3 complex subunit 312q24.11CV:PGCnp
GO_Annotation
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanNRC
CompositeSet
5037PEBP1HCNP | HCNPpp | HEL-210 | HEL-S-34 | HEL-S-96 | PBP | PEBP | PEBP-1 | RKIPphosphatidylethanolamine binding protein 112q24.23CV:PGCnp
Network
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
CompositeSet
84650EBPLEBRPemopamil binding protein like13q12-q13CV:GWASdb
CV:PGCnp
8848TSC22D1Ptg-2 | TGFB1I4 | TSC22TSC22 domain family member 113q14CV:PGCnp
DMG:Nishioka_2013
Network
CompositeSet
Darnell FMRP targets
5018OXA1LOXA1oxidase (cytochrome c) assembly 1-like14q11.2CV:PGCnp
DNM:Guipponi_2014
GSMA_I
64207IRF2BPLC14orf4 | EAP1interferon regulatory factor 2 binding protein-like14q24.3CV:PGCnp
DMG:Jaffe_2016
7443VRK1PCH1 | PCH1Avaccinia related kinase 114q32CV:PGCnpAscano FMRP targets
84334APOPT1APOP | APOP1 | C14orf153apoptogenic 1, mitochondrial14q32.33CV:GWAScat
CV:PGC128
CV:PGCnp
2923PDIA3ER60 | ERp57 | ERp60 | ERp61 | GRP57 | GRP58 | HEL-S-269 | HEL-S-93n | HsT17083 | P58 | PI-PLCprotein disulfide isomerase family A member 315q15CV:PGCnpRNA AND PROTEIN SYNTHESIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
548596CKMT1ACKMT1creatine kinase, mitochondrial 1A15q15CV:PGCnp
771CA12CA-XII | CAXII | HsT18816 | T18816carbonic anhydrase XII15q22CV:PGCnp
DMG:Wockner_2014
60677CELF6BRUNOL6CUGBP, Elav-like family member 615q24CV:PGCnp
23478SEC11A1810012E07Rik | SEC11L1 | SPC18 | SPCS4A | sid2895SEC11 homolog A, signal peptidase complex subunit15q25.3CV:GWASdb
CV:PGCnp
GO_Annotation
5531PPP4CPP-X | PP4 | PP4C | PPH3 | PPP4 | PPXprotein phosphatase 4 catalytic subunit16p11.2CNV:YES
CV:PGCnp
DMG:Jaffe_2016
GSMA_IIE
Network
23475QPRTHEL-S-90n | QPRTasequinolinate phosphoribosyltransferase16p11.2CNV:YES
CV:PGCnp
DMG:Wockner_2014
GSMA_IIE
PMID:cooccur
11151CORO1ACLABP | CLIPINA | HCORO1 | IMD8 | TACO | p57coronin 1A16p11.2CNV:YES
CV:PGCnp
GSMA_IIE
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
CompositeSet
Potential synaptic genes
29904EEF2KHSU93850 | eEF-2Keukaryotic elongation factor 2 kinase16p12.2CV:PGCnp
DNM:Fromer_2014
GSMA_IIE
CompositeSet
23420NOMO1Nomo | PM5NODAL modulator 116p13.11CV:PGCnp
GSMA_IIE
CompositeSet
Darnell FMRP targets
2013EMP2XMPepithelial membrane protein 216p13.2CV:PGCnp
DMG:Montano_2016
89941RHOT2ARHT2 | C16orf39 | MIRO-2 | MIRO2 | RASLras homolog family member T216p13.3CV:PGCnp
10101NUBP2CFD1 | NBP 2 | NUBP1nucleotide binding protein 216p13.3CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
9894TELO2CLK2 | TEL2telomere maintenance 216p13.3DMG:Wockner_2014
57799RAB40CRARL | RASL8CRAB40C, member RAS oncogene family16p13.3CV:PGCnp
4716NDUFB10PDSWNADH:ubiquinone oxidoreductase subunit B1016p13.3NetworkCompositeSet
51647FAM96BCGI-128 | MIP18family with sequence similarity 96 member B16q22.1CV:PGCnp
9114ATP6V0D1ATP6D | ATP6DV | P39 | VATX | VMA6 | VPATPDATPase H+ transporting V0 subunit d116q22.1CV:PGCnp
DMG:Nishioka_2013
DMG:vanEijk_2014
Network
ION BALANCE
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
54921CHTF8CTF8 | DERPCchromosome transmission fidelity factor 816q22.1CV:PGCnp
8824CES2CE-2 | CES2A1 | PCE-2 | iCEcarboxylesterase 216q22.1CV:PGCnp
197259MLKLhMLKLmixed lineage kinase domain-like16q23.1CV:PGCnp
DMG:Wockner_2014
1012CDH13CDHH | P105cadherin 1316q23.3CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
10200MPHOSPH6MPP | MPP-6 | MPP6M-phase phosphoprotein 616q23.3CV:PGCnp
DMG:Jaffe_2016
Network
51693TRAPPC2LHSPC176trafficking protein particle complex 2-like16q24.3CV:PGCnp
4597MVDFP17780 | MDDase | MPD | POROK7mevalonate diphosphate decarboxylase16q24.3CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
10400PEMTPEAMT | PEMPT | PEMT2 | PNMTphosphatidylethanolamine N-methyltransferase17p11.2Association
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
224ALDH3A2ALDH10 | FALDH | SLSaldehyde dehydrogenase 3 family member A217p11.2CV:PGCnp
DMG:Wockner_2014
GO_Annotation
50628GEMIN4HC56 | HCAP1 | HHRF-1 | p97gem nuclear organelle associated protein 417p13CV:PGCnp
DMG:vanEijk_2014
Network
PMID:cooccur
Ascano FMRP targets
116840CNTROBLIP8 | PP1221centrobin, centrosomal BRCA2 interacting protein17p13.1CV:PGCnp
124976SPNS2-spinster homolog 2 (Drosophila)17p13.2CV:PGCnp
DMG:Jaffe_2016
5216PFN1ALS18profilin 117p13.3CV:PGCnp
DMG:vanEijk_2014
Network
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
146760RTN4RL1NGRH2 | NgR3reticulon 4 receptor-like 117p13.3CV:PGCnp
DMG:Wockner_2014
GO_Annotation
7067THRAAR7 | CHNG6 | EAR7 | ERB-T-1 | ERBA | ERBA1 | NR1A1 | THRA1 | THRA2 | c-ERBA-1thyroid hormone receptor, alpha17q11.2CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
CompositeSet
Darnell FMRP targets
55803ADAP2CENTA2 | HSA272195 | cent-bArfGAP with dual PH domains 217q11.2CV:PGCnp
54475NLE1Nlenotchless homolog 1 (Drosophila)17q12CV:PGCnp
8396PIP4K2BPI5P4KB | PIP5K2B | PIP5KIIB | PIP5KIIbeta | PIP5P4KBphosphatidylinositol-5-phosphate 4-kinase, type II, beta17q12CV:PGCnp
DMG:Jaffe_2016
CELL METABOLISM
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
4302MLLT6AF17myeloid/lymphoid or mixed-lineage leukemia; translocated to, 617q21CV:PGCnp
4830NME1AWD | GAAD | NB | NBS | NDKA | NDPK-A | NDPKA | NM23 | NM23-H1NME/NM23 nucleoside diphosphate kinase 117q21.3CV:PGCnpCELL METABOLISM
CompositeSet
4836NMT1NMTN-myristoyltransferase 117q21.31CV:PGCnp
DMG:Wockner_2014
Network
PMID:cooccur
Ascano FMRP targets
6182MRPL125c5-2 | L12mt | MRP-L31/34 | MRPL7 | MRPL7/L12 | RPML12mitochondrial ribosomal protein L1217q25DMG:Nishioka_2013
10476ATP5HATPQATP synthase, H+ transporting, mitochondrial Fo complex subunit D17q25CV:PGCnp
DMG:Jaffe_2016
23210JMJD6PSR | PTDSR | PTDSR1jumonji domain containing 617q25CV:PGCnp
DMG:Jaffe_2016
Ascano FMRP targets
Chromatin Remodeling Genes
3959LGALS3BP90K | BTBD17B | CyCAP | M2BP | MAC-2-BP | TANGO10B | gp90lectin, galactoside-binding, soluble, 3 binding protein17q25CV:PGCnp
DMG:vanEijk_2014
5289PIK3C3VPS34 | Vps34 | hVps34phosphatidylinositol 3-kinase catalytic subunit type 318q12.3Association
CV:PGCnp
GR_WM
PMID:cooccur
147372CCBE1HKLLS1collagen and calcium binding EGF domains 118q21.32CV:GWASdb
CV:PGCnp
6449SGTASGT | alphaSGT | hSGTsmall glutamine rich tetratricopeptide repeat containing alpha19p13CV:PGCnp
DMG:Jaffe_2016
5300PIN1DOD | UBL5peptidylprolyl cis/trans isomerase, NIMA-interacting 119p13CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
CompositeSet
55621TRMT1TRM1tRNA methyltransferase 119p13.2CV:PGCnp
51073MRPL4CGI-28 | L4mtmitochondrial ribosomal protein L419p13.2CV:PGCnp
DMG:Jaffe_2016
51079NDUFA13B16.6 | CDA016 | CGI-39 | GRIM-19 | GRIM19NADH:ubiquinone oxidoreductase subunit A1319p13.2CV:PGCnp
LK:YES
CompositeSet
3949LDLRFH | FHC | LDLCQ2low density lipoprotein receptor19p13.2CV:PGCnp
Network
PMID:cooccur
Ascano FMRP targets
1786DNMT1ADCADN | AIM | CXXC9 | DNMT | HSN1E | MCMT | m.HsaIDNA (cytosine-5-)-methyltransferase 119p13.2CV:PGCnp
DMG:Wockner_2014
DNM:Gulsuner_2013
PMID:cooccur
Ascano FMRP targets
Chromatin Remodeling Genes
8666EIF3GEIF3-P42 | EIF3S4 | eIF3-delta | eIF3-p44eukaryotic translation initiation factor 3 subunit G19p13.2DMG:Jaffe_2016
Network
8677STX10SYN10 | hsyn10syntaxin 1019p13.2CV:PGCnp
2193FARSACML33 | FARSL | FARSLA | FRSA | PheHAphenylalanyl-tRNA synthetase alpha subunit19p13.2CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
DNM:Fromer_2014
CompositeSet
28974C19orf53HSPC023 | LYDG10chromosome 19 open reading frame 5319p13.2CV:PGCnp
5434POLR2ERPABC1 | RPB5 | XAP4 | hRPB25 | hsRPB5polymerase (RNA) II subunit E19p13.3CV:PGCnp
10975UQCR110710008D09Rik | QCR10 | UQCRubiquinol-cytochrome c reductase, complex III subunit XI19p13.3CV:PGCnp
10362HMG20BBRAF25 | BRAF35 | HMGX2 | HMGXB2 | PP7706 | SMARCE1r | SOXL | pp8857high mobility group 20B19p13.3DMG:Jaffe_2016Chromatin Remodeling Genes
8570KHSRPFBP2 | FUBP2 | KSRPKH-type splicing regulatory protein19p13.3CV:PGCnp
DMG:Wockner_2014
513ATP5D-ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit19p13.3CV:PGCnp
PMID:cooccur
CompositeSet
5609MAP2K7JNKK2 | MAPKK7 | MEK | MEK 7 | MKK7 | PRKMK7 | SAPKK-4 | SAPKK4mitogen-activated protein kinase kinase 719p13.3-p13.2CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
CANABINOID
DOPAMINE
SEROTONIN
G2Cdb.humanNRC
G2Cdb.humanPSP
587BCAT2BCAM | BCATM | BCT2 | PP18branched chain amino acid transaminase 219q13CV:PGCnp
GO_Annotation
6217RPS16S16ribosomal protein S1619q13.1CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
RNA AND PROTEIN SYNTHESIS
G2Cdb.humanPSD
G2Cdb.humanPSP
6626SNRPAMud1 | U1-A | U1Asmall nuclear ribonucleoprotein polypeptide A19q13.1CV:PGCnp
DMG:Jaffe_2016
8425LTBP4ARCL1C | LTBP-4 | LTBP4L | LTBP4Slatent transforming growth factor beta binding protein 419q13.1-q13.2CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
3991LIPEAOMS4 | FPLD6 | HSL | LHSlipase E, hormone sensitive type19q13.2PMID:cooccur
5424POLD1CDC2 | CRCS10 | MDPL | POLDpolymerase (DNA) delta 1, catalytic subunit19q13.3CV:PGCnp
DMG:Wockner_2014
Expression
945CD33SIGLEC-3 | SIGLEC3 | p67CD33 molecule19q13.3CV:GWASdb
CV:PGCnp
PMID:cooccur
6510SLC1A5AAAT | ASCT2 | ATBO | M7V1 | M7VS1 | R16 | RDRCsolute carrier family 1 member 519q13.3CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
6625SNRNP70RNPU1Z | RPU1 | SNRP70 | Snp1 | U1-70K | U170K | U1AP | U1RNPsmall nuclear ribonucleoprotein U1 subunit 7019q13.3CV:PGCnp
581BAXBCL2L4BCL2-associated X protein19q13.3-q13.4GO_Annotation
PMID:cooccur
3972LHBCGB4 | HH23 | LSH-B | LSH-betaluteinizing hormone beta polypeptide19q13.32PMID:cooccur
6193RPS5S5ribosomal protein S519q13.4CV:PGCnp
DMG:Jaffe_2016
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
162963ZNF610-zinc finger protein 61019q13.41CV:PGCnp
DMG:Wockner_2014
79763ISOC2-isochorismatase domain containing 219q13.42CV:PGCnp
DMG:Jaffe_2016
Network
4808NHLH2HEN2 | NSCL2 | bHLHa34nescient helix-loop-helix 21p12-p11CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
GSMA_I
GSMA_IIA
11004KIF2CCT139 | KNSL6 | MCAKkinesin family member 2C1p34.1CV:PGCnp
PMID:cooccur
Ascano FMRP targets
9670IPO13IMP13 | KAP13 | LGL2 | RANBP13importin 131p34.1CV:PGCnp
DMG:vanEijk_2014
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
51102MECRCGI-63 | FASN2B | NRBF1mitochondrial trans-2-enoyl-CoA reductase1p35.3CV:PGCnp
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
1650DDOSTAGER1 | CDG1R | OKSWcl45 | OST | OST48 | WBP1dolichyl-diphosphooligosaccharide--protein glycosyltransferase non-catalytic subunit1p36.1DMG:Wockner_2014
Network
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
832CAPZBCAPB | CAPPB | CAPZcapping actin protein of muscle Z-line beta subunit1p36.1CV:PGCnp
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanNRC
CompositeSet
5226PGD6PGDphosphogluconate dehydrogenase1p36.22CV:PGCnp
DMG:Wockner_2014
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
CompositeSet
148398SAMD11MRSsterile alpha motif domain containing 111p36.33CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
8799PEX11BPEX11-BETA | PEX14Bperoxisomal biogenesis factor 11 beta1q21.1CNV:YES
DMG:Nishioka_2013
GSMA_I
GSMA_IIA
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
7371UCK2TSA903 | UK | UMPKuridine-cytidine kinase 21q23CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
81563C1orf21PIG13chromosome 1 open reading frame 211q25CV:PGCnp
DMG:Jaffe_2016
2005ELK4SAP1ELK4, ETS transcription factor1q32CV:PGCnp
DMG:Wockner_2014
54976C20orf27-chromosome 20 open reading frame 2720p13CV:PGCnp
DMG:Nishioka_2013
5621PRNPASCR | AltPrP | CD230 | CJD | GSS | KURU | PRIP | PrP | PrP27-30 | PrP33-35C | PrPc | p27-30prion protein20p13CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
DMG:vanEijk_2014
Network
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
81610FAM83DC20orf129 | CHICA | dJ616B8.3family with sequence similarity 83 member D20q11.23CV:PGCnp
874CBR3HEL-S-25 | SDR21C2 | hCBR3carbonyl reductase 321q22.2CV:PGCnpCompositeSet
85359DGCR6LDGCR6DiGeorge syndrome critical region gene 6-like22q11.21CNV:YES
CV:PGCnp
DMG:Jaffe_2016
GSMA_I
9647PPM1FCAMKP | CaMKPase | FEM-2 | POPX2 | hFEM-2protein phosphatase, Mg2+/Mn2+ dependent 1F22q11.22CV:GWASdb
CV:PGCnp
GSMA_I
4733DRG1NEDD3developmentally regulated GTP binding protein 122q12.2CV:PGCnp
DMG:Wockner_2014
GSMA_I
10369CACNG2MRD10calcium voltage-gated channel auxiliary subunit gamma 222q13.1CV:PGCnp
GO_Annotation
PMID:cooccur
CANABINOID
DOPAMINE
EXCITABILITY
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
G2Cdb.human_PocklingtonH1
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Potential synaptic genes
5880RAC2EN-7 | Gx | HSPC022 | p21-Rac2ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)22q13.1CV:GWASdb
CV:PGCnp
GO_Annotation
G2Cdb.humanPSD
G2Cdb.humanPSP
4357MPSTMST | TST2 | TUM1mercaptopyruvate sulfurtransferase22q13.1CV:PGCnp
DMG:Nishioka_2013
9582APOBEC3BA3B | APOBEC1L | ARCD3 | ARP4 | DJ742C19.2 | PHRBNL | bK150C2.2apolipoprotein B mRNA editing enzyme catalytic subunit 3B22q13.1-q13.2CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
5600MAPK11P38B | P38BETA2 | PRKM11 | SAPK2 | SAPK2B | p38-2 | p38Betamitogen-activated protein kinase 1122q13.33CV:PGCnp
2034EPAS1ECYT4 | HIF2A | HLF | MOP2 | PASD2 | bHLHe73endothelial PAS domain protein 12p21-p16CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
11321GPN1ATPBD1A | MBDIN | NTPBP | RPAP4 | XAB1GPN-loop GTPase 12p23.3CV:GWASdb
CV:PGCnp
2355FOSL2FRA2FOS like antigen 22p23.3CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
7447VSNL1HLP3 | HPCAL3 | HUVISL1 | VILIP | VILIP-1visinin like 12p24.3CV:PGCnp
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
55256ADI1APL1 | ARD | Fe-ARD | HMFT1638 | MTCBP1 | Ni-ARD | SIPL | mtnDacireductone dioxygenase 12p25.3CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
1622DBIACBD1 | ACBP | CCK-RP | EPdiazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)2q12-q21CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GR_Ng
GSMA_I
GSMA_IIA
PMID:cooccur
CELL METABOLISM
50649ARHGEF4ASEF | ASEF1 | GEF4 | STM6Rho guanine nucleotide exchange factor 42q22CV:PGCnp
GSMA_I
GSMA_IIA
CompositeSet
Darnell FMRP targets
2817GPC1glypicanglypican 12q35-q37CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
6508SLC4A3AE3 | SLC2Csolute carrier family 4 member 32q36CV:PGCnp
DMG:Wockner_2014
GSMA_IIA
GSMA_IIE
CompositeSet
Darnell FMRP targets
728294D2HGDHD2HGDD-2-hydroxyglutarate dehydrogenase2q37.3CV:PGCnp
DMG:vanEijk_2014
7086TKTHEL-S-48 | HEL107 | TK | TKT1transketolase3p14.3CV:PGCnp
DMG:Wockner_2014
Network
CELL METABOLISM
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
3913LAMB2LAMS | NPHS5laminin subunit beta 23p21CV:PGCnp
GO_Annotation
1294COL7A1EBD1 | EBDCT | EBR1 | NDNC8collagen type VII alpha 13p21.1CV:PGCnp
26354GNL3C77032 | E2IG3 | NNP47 | NSG protein nucleolar 33p21.1CV:PGCnp
DMG:Wockner_2014
LK:YES
56920SEMA3Gsem2semaphorin 3G3p21.1CV:PGCnp
LK:YES
7384UQCRC1D3S3191 | QCR1 | UQCR1ubiquinol-cytochrome c reductase core protein I3p21.3CV:PGCnp
DEG:Maycox_2009
G2Cdb.human_mitochondria
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
7866IFRD2IFNRP | SKMc15 | SM15interferon-related developmental regulator 23p21.3CV:PGCnp
DMG:Wockner_2014
65010SLC26A6-solute carrier family 26 member 63p21.3CV:PGCnp
GO_Annotation
5859QARSGLNRS | MSCCA | PRO2195glutaminyl-tRNA synthetase3p21.31CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
Ascano FMRP targets
51143DYNC1LI1DNCLI1 | LIC1dynein cytoplasmic 1 light intermediate chain 13p22.3CV:GWASdb
CV:PGCnp
GSMA_I
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
9686VGLL4VGL-4vestigial like family member 43p25.3CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:vanEijk_2014
DMG:Wockner_2014
GSMA_I
PMID:cooccur
3592IL12ACLMF | IL-12A | NFSK | NKSF1 | P35interleukin 12A3q25.33PMID:cooccur
23101MCF2L2ARHGEF22MCF.2 cell line derived transforming sequence-like 23q27.1CV:PGCnp
DMG:Jaffe_2016
84273NOA1C4orf14 | MTG3 | hAtNOS1 | hNOA1 | mAtNOS1nitric oxide associated 14q12CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
2919CXCL1FSP | GRO1 | GROa | MGSA | MGSA-a | NAP-3 | SCYB1C-X-C motif chemokine ligand 14q21CV:PGCnp
GO_Annotation
PMID:cooccur
2920CXCL2CINC-2a | GRO2 | GROb | MGSA-b | MIP-2a | MIP2 | MIP2A | SCYB2C-X-C motif chemokine ligand 24q21CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
6622SNCANACP | PARK1 | PARK4 | PD1synuclein alpha4q21CV:PGCnp
DMG:Nishioka_2013
GO_Annotation
Network
PMID:cooccur
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
53371NUP54-nucleoporin 54kDa4q21.1DNM:Xu_2012CompositeSet
51138COPS4CSN4COP9 signalosome subunit 44q21.22CV:PGCnp
DMG:Wockner_2014
9429ABCG2ABC15 | ABCP | BCRP | BCRP1 | BMDP | CD338 | CDw338 | EST157481 | GOUT1 | MRX | MXR | MXR-1 | MXR1 | UAQTL1ATP binding cassette subfamily G member 2 (Junior blood group)4q22CV:PGCnp
DMG:Jaffe_2016
201799TMEM154-transmembrane protein 1544q31.3CV:GWASdb
CV:PGCnp
3157HMGCS1HMGCS3-hydroxy-3-methylglutaryl-CoA synthase 15p12CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
5734PTGER4EP4 | EP4Rprostaglandin E receptor 45p13.1CV:GWASdb
CV:PGCnp
PMID:cooccur
7015TERTCMM9 | DKCA2 | DKCB4 | EST2 | PFBMFT1 | TCS1 | TP2 | TRT | hEST2 | hTRTtelomerase reverse transcriptase5p15.33CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
Chromatin Remodeling Genes
25859PART1NCRNA00206prostate androgen-regulated transcript 1 (non-protein coding)5q12.1CV:PGCnp
995CDC25CCDC25 | PPP1R60cell division cycle 25C5q31CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_I
8841HDAC3HD3 | RPD3 | RPD3-2histone deacetylase 35q31GSMA_I
PMID:cooccur
Chromatin Remodeling Genes
501ALDH7A1ATQ1 | EPD | PDEaldehyde dehydrogenase 7 family member A15q31CV:PGCnp
DMG:Jaffe_2016
GSMA_I
CompositeSet
4695NDUFA2B8 | CD14 | CIB8NADH:ubiquinone oxidoreductase subunit A25q31.2CV:PGCnp
DMG:Jaffe_2016
GSMA_I
CompositeSet
10011SRA1SRA | SRAP | STRAA1 | pp7684steroid receptor RNA activator 15q31.3CV:PGCnp
GSMA_I
PMID:cooccur
6949TCOF1MFD1 | TCS | TCS1 | treacletreacle ribosome biogenesis factor 15q32CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
GSMA_I
GSMA_IIA
GSMA_IIE
1212CLTBLCBclathrin light chain B5q35CV:PGCnp
DMG:Jaffe_2016
DMG:vanEijk_2014
GSMA_IIA
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
192286HIGD2ARCF1bHIG1 hypoxia inducible domain family member 2A5q35.2GSMA_IIA
51428DDX41ABSDEAD-box helicase 415q35.3CV:PGCnp
DMG:Wockner_2014
GSMA_IIA
10695CNPY3CAG4A | ERDA5 | PRAT4A | TNRC5canopy FGF signaling regulator 36p21.1DMG:vanEijk_2014
GO_Annotation
GSMA_IIE
4795NFKBIL1IKBL | LST1 | NFKBILNFKB inhibitor like 16p21.3CV:PGCnp
DMG:Nishioka_2013
GSMA_I
PMID:cooccur
6992PPP1R11CFAP255 | HCG-V | HCGV | IPP3 | TCTE5 | TCTEX5protein phosphatase 1 regulatory inhibitor subunit 116p21.3GSMA_I
PMID:cooccur
10471PFDN6H2-KE2 | HKE2 | KE-2 | PFD6prefoldin subunit 66p21.3CV:PGCnp
DMG:Jaffe_2016
GSMA_I
30834ZNRD1HTEX-6 | HTEX6 | Rpa12 | TCTEX6 | TEX6 | ZR14 | hZR14 | tctex-6zinc ribbon domain containing 16p21.3CV:GWAScat
CV:GWASdb
CV:PGCnp
GSMA_I
PMID:cooccur
55168MRPS18AHumanS18b | MRP-S18-3 | MRPS18-3 | S18bmtmitochondrial ribosomal protein S18A6p21.3CV:PGCnp
DMG:Jaffe_2016
GSMA_IIE
5089PBX2G17 | HOX12 | PBX2MHCpre-B-cell leukemia homeobox 26p21.3CV:PGCnp
GSMA_I
6204RPS10DBA9 | S10ribosomal protein S106p21.31CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIE
G2Cdb.humanPSD
G2Cdb.humanPSP
10455ECI2ACBD2 | DRS-1 | DRS1 | HCA88 | PECI | dJ1013A10.3enoyl-CoA delta isomerase 26p24.3CV:PGCnp
GSMA_I
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
4835NQO2DHQV | DIA6 | NMOR2 | QR2NAD(P)H dehydrogenase, quinone 26p25.2Association
CV:PGCnp
DMG:Wockner_2014
GR_WM
GSMA_I
PMID:cooccur
51389RWDD1CGI-24 | PTD013RWD domain containing 16q13-q22.33CV:GWASdb
CV:PGCnp
9324HMGN3PNAS-24 | PNAS-25 | TRIP7high mobility group nucleosomal binding domain 36q14.1CV:PGCnp
DMG:Wockner_2014
643749TRAF3IP2-AS1C6UAS | C6orf3 | NCRNA00248 | TRAF3IP2-AS2TRAF3IP2 antisense RNA 16q21CV:PGCnp
6950TCP1CCT-alpha | CCT1 | CCTa | D6S230E | TCP-1-alphat-complex 16q25.3-q26Association
CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
5425POLD2-polymerase (DNA) delta 2, accessory subunit7p13CV:PGCnp
DMG:Wockner_2014
4967OGDHAKGDH | E1k | OGDCoxoglutarate dehydrogenase7p14-p13CV:PGCnpG2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_mitochondria
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
5879RAC1MIG5 | Rac-1 | TC-25 | p21-Rac1ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)7p22CV:PGCnp
DMG:Wockner_2014
Network
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Potential synaptic genes
2783GNB2-G protein subunit beta 27q22CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
DMG:vanEijk_2014
DMG:Wockner_2014
DNM:Fromer_2014
CANABINOID
DOPAMINE
G-PROTEIN RELAY
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
10552ARPC1AArc40 | HEL-68 | HEL-S-307 | SOP2Hs | SOP2Lactin related protein 2/3 complex subunit 1A7q22.1DMG:Wockner_2014STRUCTURAL PLASTICITY
G2Cdb.humanPSD
G2Cdb.humanPSP
27153ZNF777-zinc finger protein 7777q36.1CV:PGCnp
DMG:Jaffe_2016
55246CCDC25-coiled-coil domain containing 258p21.1CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
83595SOX7-SRY-box 78p23.1CV:PGCnpG2Cdb.humanPSD
G2Cdb.humanPSP
6156RPL30L30ribosomal protein L308q22CV:PGCnp
DMG:vanEijk_2014
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
4609MYCMRTL | MYCC | bHLHe39 | c-Mycv-myc avian myelocytomatosis viral oncogene homolog8q24.21CV:PGCnp
DMG:Jaffe_2016
Expression
Network
PMID:cooccur
81858SHARPINSIPL1SHANK associated RH domain interactor8q24.3DNM:Guipponi_2014G2Cdb.humanPSD
G2Cdb.humanPSP
Potential synaptic genes
84232MAF1-MAF1 homolog, negative regulator of RNA polymerase III8q24.3DMG:Jaffe_2016
30968STOML2HSPC108 | SLP-2stomatin like 29p13.1CV:PGCnp
GO_Annotation
G2Cdb.humanPSD
G2Cdb.humanPSP
4507MTAPBDMF | DMSFH | DMSMFH | HEL-249 | LGMBF | MSAP | c86fusmethylthioadenosine phosphorylase9p21CV:PGCnp
1164CKS2CKSHS2CDC28 protein kinase regulatory subunit 29q22CV:PGCnp
DMG:Jaffe_2016
5887RAD23BHHR23B | HR23B | P58RAD23 homolog B, nucleotide excision repair protein9q31.2CV:PGCnp
DMG:Jaffe_2016
51116MRPS2CGI-91 | MRP-S2 | S2mtmitochondrial ribosomal protein S29q34CV:PGCnp
DMG:Jaffe_2016
10013HDAC6CPBHM | HD6 | JM21 | PPP1R90histone deacetylase 6Xp11.23CV:PGCnp
DMG:vanEijk_2014
Chromatin Remodeling Genes
Potential synaptic genes
10682EBPCDPX2 | CHO2 | CPX | CPXD | MENDemopamil binding protein (sterol isomerase)Xp11.23-p11.22CV:PGCnp
PMID:cooccur
23229ARHGEF9COLLYBISTIN | EIEE8 | HPEM-2 | PEM-2 | PEM2Cdc42 guanine nucleotide exchange factor 9Xq11.1CV:PGCnp
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
Potential synaptic genes
3251HPRT1HGPRT | HPRThypoxanthine phosphoribosyltransferase 1Xq26.1CV:PGCnp
DMG:vanEijk_2014
GO_Annotation
Network
PMID:cooccur
26576SRPK3MSSK-1 | MSSK1 | STK23SRSF protein kinase 3Xq28GO_Annotation
2010EMDEDMD | LEMD5 | STAemerinXq28CV:PGCnp
DMG:vanEijk_2014
PMID:cooccur