Search results: The pahtway p4626 has 418 genes in the original annotation. Currently, there are 245 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group ? Functional group ?
6840SVIL-supervillin10p11.2CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Ascano FMRP targets
1390CREMCREM-2 | ICER | hCREM-2cAMP responsive element modulator10p11.21CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
2572GAD2GAD65glutamate decarboxylase 210p11.23CV:PGCnp
GO_Annotation
Network
PMID:cooccur
8829NRP1BDCA4 | CD304 | NP1 | NRP | VEGF165Rneuropilin 110p12CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
Ascano FMRP targets
783CACNB2CACNLB2 | CAVB2 | MYSBcalcium voltage-gated channel auxiliary subunit beta 210p12CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
CV:Ripke_2013
GO_Annotation
LK:YES
PMID:cooccur
CompositeSet
219670ENKURC10orf63 | CFAP106enkurin, TRPC channel interacting protein10p12.1CV:PGCnp
PMID:cooccur
55130ARMC4CILD23armadillo repeat containing 410p12.1CV:PGCnp
1316KLF6BCD1 | CBA1 | COPEB | CPBP | GBF | PAC1 | ST12 | ZF9Kruppel-like factor 610p15Association
CV:PGCnp
DMG:Jaffe_2016
22982DIP2CKIAA0934disco interacting protein 2 homolog C10p15.3CV:PGCnp
DMG:Montano_2016
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
9806SPOCK2testican-2sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 210pter-q25.3CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
6387CXCL12IRH | PBSF | SCYB12 | SDF1 | TLSF | TPAR1C-X-C motif chemokine ligand 1210q11.1CV:GWAScat
CV:GWASdb
CV:PGCnp
Expression
PMID:cooccur
5092PCBD1DCOH | PCBD | PCD | PHSpterin-4 alpha-carbinolamine dehydratase 110q22CV:PGCnp
3433IFIT2G10P2 | GARG-39 | IFI-54 | IFI-54K | IFI54 | IFIT-2 | ISG-54 K | ISG-54K | ISG54 | P54 | cig42interferon induced protein with tetratricopeptide repeats 210q23.31CV:PGCnp
PMID:cooccur
3434IFIT1C56 | G10P1 | IFI-56 | IFI-56K | IFI56 | IFIT-1 | IFNAI1 | ISG56 | P56 | RNM561interferon induced protein with tetratricopeptide repeats 110q23.31CV:PGCnp
PMID:cooccur
4791NFKB2CVID10 | H2TF1 | LYT-10 | LYT10 | NF-kB2 | p100 | p49/p100 | p52nuclear factor of kappa light polypeptide gene enhancer in B-cells 210q24CV:PGCnp
DMG:Nishioka_2013
GO_Annotation
Network
1308COL17A1BA16H23.2 | BP180 | BPA-2 | BPAG2 | ERED | LAD-1collagen type XVII alpha 110q24.3CV:GWASdb
CV:PGCnp
8590OR6A2I7 | OR11-55 | OR6A1 | OR6A2Polfactory receptor family 6 subfamily A member 211p15CV:PGCnp
89797NAV2HELAD1 | POMFIL2 | RAINB1 | STEERIN2 | UNC53H2neuron navigator 211p15.1CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
CompositeSet
Darnell FMRP targets
387751GVINP1GVIN1 | GVIN1P | VLIG-1 | VLIG1GTPase, very large interferon inducible pseudogene 111p15.4CV:PGCnp
9866TRIM66C11orf29 | TIF1D | TIF1DELTAtripartite motif containing 6611p15.4CV:PGCnp
DMG:Wockner_2014
1028CDKN1CBWCR | BWS | KIP2 | WBS | p57 | p57Kip2cyclin-dependent kinase inhibitor 1C11p15.5CV:PGCnp
DMG:Nishioka_2013
DMG:vanEijk_2014
DMG:Wockner_2014
PMID:cooccur
283131NEAT1LINC00084 | NCRNA00084 | TncRNA | VINCnuclear paraspeckle assembly transcript 1 (non-protein coding)11q13.1CV:PGCnp
DMG:Wockner_2014
83706FERMT3KIND3 | MIG-2 | MIG2B | UNC112C | URP2 | URP2SFfermitin family member 311q13.1CV:PGCnp
58473PLEKHB1KPL1 | PHR1 | PHRET1pleckstrin homology domain containing B111q13.5-q14.1CV:PGCnp
DMG:vanEijk_2014
23052ENDOD1-endonuclease domain containing 111q21CV:PGCnp
PMID:cooccur
RNA AND PROTEIN SYNTHESIS
143689PIWIL4HIWI2 | MIWI2piwi-like RNA-mediated gene silencing 411q21CV:GWASdb
CV:PGCnp
330BIRC3AIP1 | API2 | CIAP2 | HAIP1 | HIAP1 | MALT2 | MIHC | RNF49 | c-IAP2baculoviral IAP repeat containing 311q22CV:PGCnp
DMG:vanEijk_2014
PMID:cooccur
23621BACE1ASP2 | BACE | HSPC104beta-site APP-cleaving enzyme 111q23.2-q23.3GO_Annotation
GSMA_I
PMID:cooccur
23365ARHGEF12LARG | PRO2792Rho guanine nucleotide exchange factor 1211q23.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
CompositeSet
Darnell FMRP targets
1656DDX6HLR2 | P54 | RCKDEAD-box helicase 611q23.3CV:PGCnp
CV:PheWAS
GSMA_I
54414SIAEAIS6 | CSE-C | CSEC | LSE | YSG2sialic acid acetylesterase11q24CV:PGCnp
DMG:Wockner_2014
79365BHLHE41BHLHB3 | DEC2 | SHARP1 | hDEC2basic helix-loop-helix family member e4112p12.1CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
2012EMP1CL-20 | EMP-1 | TMPepithelial membrane protein 112p12.3CV:PGCnp
DMG:Wockner_2014
7450VWFF8VWF | VWDvon Willebrand factor12p13.3CV:PGCnp
Expression
PMID:cooccur
27345KCNMB4-potassium calcium-activated channel subfamily M regulatory beta subunit 412qCV:PGCnp
GO_Annotation
EXCITABILITY
196527ANO6BDPLT7 | SCTS | TMEM16Fanoctamin 612q12CV:PGCnp
55605KIF21ACFEOM1 | FEOM1 | FEOM3Akinesin family member 21A12q12CV:PGCnpCompositeSet
Darnell FMRP targets
23017FAIM2LFG | LFG2 | NGP35 | NMP35 | TMBIM2Fas apoptotic inhibitory molecule 212q13CV:PGCnp
DMG:Wockner_2014
GO_Annotation
3626INHBCIHBCinhibin beta C12q13.1CV:PGCnp
51380CSADCSD | PCAPcysteine sulfinic acid decarboxylase12q13.11-q14.3CV:PGCnp
DMG:Wockner_2014
3695ITGB7-integrin subunit beta 712q13.13CV:PGCnp
DMG:vanEijk_2014
Network
85406DNAJC14DNAJ | DRIP78 | HDJ3 | LIP6DnaJ heat shock protein family (Hsp40) member C1412q13.2CV:PGCnp
DMG:Jaffe_2016
Network
51561IL23AIL-23 | IL-23A | IL23P19 | P19 | SGRFinterleukin 23 subunit alpha12q13.3CV:PGCnp
1368CPM-carboxypeptidase M12q14.3CV:PGCnp
PMID:cooccur
5367PMCHMCH | ppMCHpro-melanin concentrating hormone12q23.2GO_Annotation
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
7296TXNRD1GRIM-12 | TR | TR1 | TRXR1 | TXNRthioredoxin reductase 112q23.3CV:PGCnp
5027P2RX7P2X7purinergic receptor P2X 712q24CV:PGCnp
GO_Annotation
PMID:cooccur
GPCR SIGNALLING
5025P2RX4P2X4 | P2X4Rpurinergic receptor P2X 412q24.32CV:PGCnp
GO_Annotation
253832ZDHHC204933421L13Rik | DHHC-20zinc finger DHHC-type containing 2013q12.11CV:PGCnp
DMG:Jaffe_2016
26524LATS2KPMlarge tumor suppressor kinase 213q12.11DMG:Wockner_2014Ascano FMRP targets
283537SLC46A3FKSG16solute carrier family 46 member 313q12.3CV:PGCnp
DMG:Jaffe_2016
1910EDNRBABCDS | ET-B | ET-BR | ETB | ETB1 | ETBR | ETRB | HSCR | HSCR2 | WS4Aendothelin receptor type B13q22CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
23077MYCBP2Myc-bp2 | PAM | PhrMYC binding protein 2, E3 ubiquitin protein ligase13q22CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
CompositeSet
Darnell FMRP targets
688KLF5BTEB2 | CKLF | IKLFKruppel-like factor 5 (intestinal)13q22.1Association
CV:PGCnp
PMID:cooccur
4901NRLD14S46E | NRL-MAF | RP27neural retina leucine zipper14q11.1-q11.2GSMA_I
PMID:cooccur
2643GCH1DYT14 | DYT5 | DYT5a | GCH | GTP-CH-1 | GTPCH1 | HPABH4BGTP cyclohydrolase 114q22.1-q22.2CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
10858CYP46A1CP46 | CYP46cytochrome P450 family 46 subfamily A member 114q32.1CV:PGCnp
GO_Annotation
PMID:cooccur
9728SECISBP2LSBP2L | SLANSECIS binding protein 2 like15q21.1CV:PGCnpCompositeSet
Darnell FMRP targets
4756NEO1IGDCC2 | NGN | NTN1R2neogenin 115q22.3-q23CV:PGCnp
DEG:Zhao_2015
DMG:Nishioka_2013
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
Ascano FMRP targets
23604DAPK2DRP-1 | DRP1death-associated protein kinase 215q22.31CV:PGCnp
Network
80381CD2764Ig-B7-H3 | B7-H3 | B7H3 | B7RP-2CD276 molecule15q23-q24CV:PGCnp
GO_Annotation
PMID:cooccur
54469ZFAND6AWP1 | ZA20D3 | ZFAND5Bzinc finger AN1-type containing 615q25.1CV:GWASdb
CV:PGCnp
Network
79585CORO70610011B16Rik | CRN7 | POD1coronin 716p13.3CV:PGCnp
DMG:Wockner_2014
5493PPL-periplakin16p13.3CV:PGCnp
PMID:cooccur
8912CACNA1HCACNA1HB | Cav3.2 | ECA6 | EIG6calcium voltage-gated channel subunit alpha1 H16p13.3CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
CompositeSet
80205CHD9AD013 | CHD-9 | CReMM | KISH2 | PRIC320chromodomain helicase DNA binding protein 916q12.2CV:PGCnp
DMG:Jaffe_2016
6376CX3CL1ABCD-3 | C3Xkine | CXC3 | CXC3C | NTN | NTT | SCYD1 | fractalkine | neurotactinC-X3-C motif chemokine ligand 116q13CV:PGCnp
PMID:cooccur
64127NOD2ACUG | BLAU | CARD15 | CD | CLR16.3 | IBD1 | NLRC2 | NOD2B | PSORAS1nucleotide binding oligomerization domain containing 216q21CV:PGCnp
DMG:Montano_2016
Expression
GSMA_IIE
PMID:cooccur
6236RRADRAD | RAD1 | REM3Ras-related associated with diabetes16q22CV:PGCnp
Network
146433IL34C16orf77 | IL-34interleukin 3416q22.1CV:PGCnp
DMG:Wockner_2014
1728NQO1DHQU | DIA4 | DTD | NMOR1 | NMORI | QR1NAD(P)H dehydrogenase, quinone 116q22.1CV:PGCnp
GO_Annotation
PMID:cooccur
1012CDH13CDHH | P105cadherin 1316q23.3CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
27132CPNE7-copine 716q24.3CV:PGCnp
51655RASD1AGS1 | DEXRAS1 | MGC:26290RAS, dexamethasone-induced 117p11.2CV:PGCnp
DMG:Nishioka_2013
Network
4642MYO1DPPP1R108 | myr4myosin ID17q11.2CV:PGCnpG2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Ascano FMRP targets
6532SLC6A45-HTT | 5-HTTLPR | 5HTT | HTT | OCD1 | SERT | SERT1 | hSERTsolute carrier family 6 member 417q11.2ADT:Sun_2012
Association
Core
CV:PGCnp
GO_Annotation
GR_COR
GR_Ng
GR_WM
PMID:cooccur
NEUROTRANSMITTER METABOLISM
SEROTONIN
5409PNMTPENT | PNMTasephenylethanolamine N-methyltransferase17q12CV:PGCnp
PMID:cooccur
10493VAT1VATIvesicle amine transport 117q21CV:PGCnp
9256BZRAP1PBR-IP | PRAX-1 | PRAX1 | RIM-BP1 | RIMBP1benzodiazepine receptor (peripheral) associated protein 117q22CV:GWASdb
CV:PGCnp
DMG:vanEijk_2014
DMG:Wockner_2014
DNM:Fromer_2014
GPCR SIGNALLING
CompositeSet
Darnell FMRP targets
762CA4CAIV | Car4 | RP17carbonic anhydrase IV17q23CV:PGCnp
PMID:cooccur
CompositeSet
1636ACEACE1 | CD143 | DCP | DCP1 | ICH | MVCD3angiotensin I converting enzyme17q23.3CV:PGCnp
Network
PMID:cooccur
9123SLC16A3MCT 3 | MCT 4 | MCT-3 | MCT-4 | MCT3 | MCT4solute carrier family 16 member 317q25CV:PGCnp
DMG:Wockner_2014
5034P4HBCLCRP1 | DSI | ERBA2L | GIT | P4Hbeta | PDI | PDIA1 | PHDB | PO4DB | PO4HB | PROHBprolyl 4-hydroxylase subunit beta17q25CV:PGCnp
DMG:Nishioka_2013
Network
RNA AND PROTEIN SYNTHESIS
252884ZNF396ZSCAN14zinc finger protein 39618q12CV:PGCnp
DMG:Wockner_2014
1824DSC2ARVD11 | CDHF2 | DG2 | DGII/III | DSC3desmocollin 218q12.1CV:PGCnp
PMID:cooccur
26040SETBP1MRD29 | SEBSET binding protein 118q21.1CV:PGCnp
DMG:Wockner_2014
55205ZNF532-zinc finger protein 53218q21.32CV:PGCnp
DNM:Fromer_2014
CompositeSet
9441MED26CRSP7 | CRSP70mediator complex subunit 2619p13.11CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
162993ZNF846-zinc finger protein 84619p13.2CV:PGCnp
DMG:Jaffe_2016
83483PLVAPFELS | PV-1 | PV1 | gp68plasmalemma vesicle associated protein19p13.2CV:PGCnp
DMG:Wockner_2014
3383ICAM1BB2 | CD54 | P3.58intercellular adhesion molecule 119p13.2CV:PGCnp
CV:PheWAS
DMG:Wockner_2014
DNM:McCarthy_2014
10347ABCA7ABCA-SSN | ABCXATP binding cassette subfamily A member 719p13.3CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
57455REXO1ELOABP1 | EloA-BP1 | REX1 | TCEB3BP1REX1, RNA exonuclease 1 homolog19p13.3CV:PGCnp
94274PPP1R14ACPI-17 | CPI17 | PPP1INLprotein phosphatase 1 regulatory inhibitor subunit 14A19q13.1CV:PGCnp
DMG:Wockner_2014
126432RINL-Ras and Rab interactor like19q13.2CV:PGCnp
DMG:Wockner_2014
8605PLA2G4CCPLA2-gammaphospholipase A2 group IVC19q13.3Association
CV:GWASdb
CV:PGCnp
PMID:cooccur
353355ZNF233-zinc finger protein 23319q13.31CV:PGCnp
5971RELBI-REL | IREL | REL-Bv-rel avian reticuloendotheliosis viral oncogene homolog B19q13.32CV:PGCnp
GO_Annotation
Network
63934ZNF667MIPU1zinc finger protein 66719q13.43CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
343263MYBPHL-myosin binding protein H-like1p13.3CV:PGCnp
DNM:Fromer_2014
CompositeSet
24ABCA4ABC10 | ABCR | ARMD2 | CORD3 | FFM | RMP | RP19 | STGD | STGD1ATP binding cassette subfamily A member 41p22CV:PGCnp
DMG:Wockner_2014
2634GBP2-guanylate binding protein 21p22.2CV:PGCnp
DEG:Sanders_2013
5563PRKAA2AMPK | AMPK2 | AMPKa2 | PRKAAprotein kinase AMP-activated catalytic subunit alpha 21p31CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
10487CAP1CAP | CAP1-PENCAP, adenylate cyclase-associated protein 1 (yeast)1p34.2CV:PGCnp
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
353500BMP8A-bone morphogenetic protein 8a1p34.3CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
1441CSF3RCD114 | GCSFRcolony stimulating factor 3 receptor1p35-p34.3CV:PGCnp
DNM:Gulsuner_2013
127294MYOM3-myomesin 31p36.11CV:PGCnp
DMG:Wockner_2014
Expression
55450CAMK2N1PRO1489calcium/calmodulin-dependent protein kinase II inhibitor 11p36.12CV:PGCnp
DMG:vanEijk_2014
GO_Annotation
INTRACELLULAR SIGNAL TRANSDUCTION
SEROTONIN
CompositeSet
Darnell FMRP targets
23569PADI4PAD | PAD4 | PADI5 | PDI4 | PDI5peptidyl arginine deiminase, type IV1p36.13CV:GWASdb
CV:PGCnp
PMID:cooccur
142678MIB2ZZANK1 | ZZZ5mindbomb E3 ubiquitin protein ligase 21p36.33DMG:Wockner_2014
148741ANKRD35-ankyrin repeat domain 351q21.1CNV:YES
CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIA
388677NOTCH2NLN2Nnotch 2 N-terminal like1q21.2CNV:YES
GSMA_I
GSMA_IIA
9722NOS1AP6330408P19Rik | CAPONnitric oxide synthase 1 adaptor protein1q23.3Association
CV:GWASdb
CV:PGCnp
Expression
GR_Ng
GSMA_IIA
PMID:cooccur
127933UHMK1KIS | KIST | P-CIP2U2AF homology motif (UHM) kinase 11q23.3Association
CV:PGCnp
GR_Ng
GSMA_IIA
PMID:cooccur
9674KIAA0040-KIAA00401q25.1CV:GWASdb
CV:PGCnp
5321PLA2G4APLA2G4 | cPLA2 | cPLA2-alphaphospholipase A2 group IVA1q31.1Association
CV:PGCnp
GO_Annotation
GR_Ng
GR_WM
PMID:cooccur
G2Cdb.humanNRC
G2Cdb.humanPSP
1604CD55CR | CROM | DAF | TCCD55 molecule (Cromer blood group)1q32CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
55733HHATMART2 | SKI1 | Sknhedgehog acyltransferase1q32CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
5629PROX1-prospero homeobox 11q41CV:GWASdb
CV:PGCnp
PMID:cooccur
27185DISC1C1orf136 | SCZD9disrupted in schizophrenia 11q42.1Association
Core
DMG:Wockner_2014
GR_COR
GR_Ng
GR_WM
Network
PMID:cooccur
375057C1orf95-chromosome 1 open reading frame 951q42.12CV:PGCnp
DMG:Wockner_2014
4811NID1NIDnidogen 11q43CV:GWASdb
CV:PGCnp
163882CNSTC1orf71 | PPP1R64consortin, connexin sorting protein1q44CV:PGCnp
DMG:Jaffe_2016
23236PLCB1EIEE12 | PI-PLC | PLC-154 | PLC-I | PLC-beta-1 | PLC154 | PLCB1A | PLCB1Bphospholipase C beta 120p12CV:PGCnp
CV:PheWAS
DMG:Jaffe_2016
DMG:Nishioka_2013
GSMA_I
Network
PMID:cooccur
CANABINOID
INTRACELLULAR SIGNAL TRANSDUCTION
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_mGluR5
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
Potential synaptic genes
9770RASSF2CENP-34 | RASFADINRas association domain family member 220p13CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
116835HSPA12BC20orf60heat shock protein family A (Hsp70) member 12B20p13CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
51378ANGPT4AGP4 | ANG-3 | ANG4angiopoietin 420p13CV:GWASdb
CV:PGCnp
GO_Annotation
79175ZNF343dJ734P14.5zinc finger protein 34320p13CV:PGCnp
DMG:Jaffe_2016
8771TNFRSF6BDCR3 | DJ583P15.1.1 | M68 | M68E | TR6tumor necrosis factor receptor superfamily member 6b20q13.3CV:PGCnp
Expression
4599MX1IFI-78K | IFI78 | MX | MxAMX dynamin like GTPase 121q22.3CV:PGCnp
PMID:cooccur
29799YPEL1FKSG3yippee like 122q11.2CV:PGCnp
Expression
GSMA_I
7122CLDN5AWAL | BEC1 | CPETRL1 | TMVCFclaudin 522q11.21Association
CNV:YES
CV:GWASdb
CV:PGCnp
GO_Annotation
GR_Ng
GR_WM
GSMA_I
PMID:cooccur
91179SCARF2NSR1 | SREC-II | SREC2 | SRECRP-1 | VDEGSscavenger receptor class F member 222q11.21CNV:YES
CV:PGCnp
DMG:Wockner_2014
GSMA_I
9342SNAP29CEDNIK | SNAP-29synaptosome associated protein 29kDa22q11.21Association
CNV:YES
CV:GWASdb
CV:PGCnp
GO_Annotation
GR_COR
GR_WM
GSMA_I
PMID:cooccur
EXOCYTOSIS
7078TIMP3HSMRK222 | K222 | K222TA2 | SFDTIMP metallopeptidase inhibitor 322q12.3Association
CV:PGCnp
GSMA_I
5465PPARANR1C1 | PPAR | PPARalpha | hPPARperoxisome proliferator activated receptor alpha22q13.31CV:PGCnp
PMID:cooccur
285126DNAJC5GCSP-gammaDnaJ heat shock protein family (Hsp40) member C5 gamma2p23.3CV:PGCnp
57159TRIM54MURF | MURF-3 | RNF30 | muRF3tripartite motif containing 542p23.3CV:PGCnp
4862NPAS2MOP4 | PASD4 | bHLHe9neuronal PAS domain protein 22q11.2CV:PGCnp
GO_Annotation
GSMA_I
PMID:cooccur
CompositeSet
Darnell FMRP targets
376940ZC3H6ZC3HDC6zinc finger CCCH-type containing 62q13CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
GSMA_I
GSMA_IIA
CompositeSet
4929NR4A2HZF-3 | NOT | NURR1 | RNR1 | TINURnuclear receptor subfamily 4 group A member 22q22-q23Association
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
GR_COR
GR_Ng
GR_WM
GSMA_IIA
PMID:cooccur
64135IFIH1AGS7 | Hlcd | IDDM19 | MDA-5 | MDA5 | RLR-2 | SGMRT1interferon induced, with helicase C domain 12q24CV:PGCnp
DMG:Wockner_2014
GSMA_IIA
PMID:cooccur
Ascano FMRP targets
3236HOXD10HOX4 | HOX4D | HOX4E | Hox-4.4homeobox D102q31.1CV:PGCnp
79411GLB1L-galactosidase beta 1 like2q35CV:PGCnp
GSMA_IIA
GSMA_IIE
6508SLC4A3AE3 | SLC2Csolute carrier family 4 member 32q36CV:PGCnp
DMG:Wockner_2014
GSMA_IIA
GSMA_IIE
CompositeSet
Darnell FMRP targets
5270SERPINE2GDN | GDNPF | PI-7 | PI7 | PN-1 | PN1 | PNIserpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 22q36.1CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_IIA
GSMA_IIE
G2Cdb.humanPSP
6091ROBO1DUTT1 | SAX3roundabout guidance receptor 13p12CV:GWASdb
CV:PGCnp
GO_Annotation
GSMA_IIA
GSMA_IIE
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
Ascano FMRP targets
10550ARL6IP5DERP11 | GTRAP3-18 | HSPC127 | JWA | PRAF3 | Yip6b | addicsin | hp22 | jmxADP ribosylation factor like GTPase 6 interacting protein 53p14DMG:Jaffe_2016
GO_Annotation
56999ADAMTS9-ADAM metallopeptidase with thrombospondin type 1 motif 93p14.1CV:GWASdb
CV:PGCnp
7048TGFBR2AAT3 | FAA3 | LDS1B | LDS2 | LDS2B | MFS2 | RIIC | TAAD2 | TGFR-2 | TGFbeta-RIItransforming growth factor beta receptor II3p22CV:PGCnp
GO_Annotation
GSMA_I
PMID:cooccur
4615MYD88MYD88Dmyeloid differentiation primary response 883p22CV:PGCnp
GSMA_I
PMID:cooccur
85443DCLK3CLR | DCAMKL3 | DCDC3C | DCK3doublecortin like kinase 33p22.2CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
GSMA_I
57337SENP7-SUMO1/sentrin specific peptidase 73q12CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GSMA_IIA
GSMA_IIE
23129PLXND1PLEXD1plexin D13q22.1CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
CompositeSet
Darnell FMRP targets
2257FGF12FGF12B | FHF1fibroblast growth factor 123q28CV:PGCnp
GO_Annotation
3516RBPJAOS3 | CBF1 | IGKJRB | IGKJRB1 | KBF2 | RBP-J | RBPJK | RBPSUH | SUH | cslrecombination signal binding protein for immunoglobulin kappa J region4p15.2CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
94031HTRA3Prsp | TaspHtrA serine peptidase 34p16.1CV:PGCnp
DMG:Wockner_2014
GO_Annotation
9662CEP135CEP4 | KIAA0635 | MCPH8centrosomal protein 135kDa4q12CV:PGCnp
DMG:Jaffe_2016
2920CXCL2CINC-2a | GRO2 | GROb | MGSA-b | MIP-2a | MIP2 | MIP2A | SCYB2C-X-C motif chemokine ligand 24q21CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
51316PLAC8C15 | DGIC | PNAS-144 | onzinplacenta specific 84q21.22CV:PGCnp
DMG:Jaffe_2016
9429ABCG2ABC15 | ABCP | BCRP | BCRP1 | BMDP | CD338 | CDw338 | EST157481 | GOUT1 | MRX | MXR | MXR-1 | MXR1 | UAQTL1ATP binding cassette subfamily G member 2 (Junior blood group)4q22CV:PGCnp
DMG:Jaffe_2016
22915MMRN1ECM | EMILIN4 | GPIa* | MMRNmultimerin 14q22CV:PGCnp
6696SPP1BNSP | BSPI | ETA-1 | OPNsecreted phosphoprotein 14q22.1CV:PGCnp
CV:PheWAS
152926PPM1KBDP | MSUDMV | PP2Ckappa | PP2Cm | PTMP | UG0882E07protein phosphatase, Mg2+/Mn2+ dependent 1K4q22.1CV:GWASdb
CV:PGCnp
8649LAMTOR3MAP2K1IP1 | MAPBP | MAPKSP1 | MP1 | PRO0633 | Ragulator3late endosomal/lysosomal adaptor, MAPK and MTOR activator 34q23CV:PGCnp
79807GSTCD-glutathione S-transferase C-terminal domain containing4q24CV:PGCnp
23657SLC7A11CCBR1 | xCTsolute carrier family 7 member 114q28.3CV:GWASdb
CV:PGCnp
DNM:McCarthy_2014
GO_Annotation
PMID:cooccur
1047CLGN-calmegin4q28.3-q31.1DMG:Jaffe_2016
4086SMAD1BSP-1 | BSP1 | JV4-1 | JV41 | MADH1 | MADR1SMAD family member 14q31CV:PGCnp
GO_Annotation
2743GLRBHKPX2glycine receptor beta4q31.3CV:PGCnp
DMG:Wockner_2014
GO_Annotation
7097TLR2CD282 | TIL4toll like receptor 24q32CV:PGCnp
PMID:cooccur
2982GUCY1A3GC-SA3 | GUC1A3 | GUCA3 | GUCSA3 | GUCY1A1 | MYMY6guanylate cyclase 1, soluble, alpha 34q32.1CV:PGCnp
DEG:Sanders_2013
DMG:Wockner_2014
INTRACELLULAR SIGNAL TRANSDUCTION
1519CTSOCTSO1cathepsin O4q32.1CV:PGCnp
23520ANP32CPP32R1acidic nuclear phosphoprotein 32 family member C4q32.3CV:PGCnp
23037PDZD2AIPC | PAPIN | PDZK3 | PIN1PDZ domain containing 25p13.3CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
PMID:cooccur
CompositeSet
Darnell FMRP targets
54545MTMR123-PAP | PIP3APmyotubularin related protein 125p13.3CV:PGCnp
PMID:cooccur
23743BHMT2-betaine--homocysteine S-methyltransferase 25q13CV:PGCnp
5924RASGRF2GRF2 | RAS-GRF2Ras protein specific guanine nucleotide releasing factor 25q13CV:GWAScat
CV:PGCnp
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
134285TMEM171PRP2transmembrane protein 1715q13.2CV:PGCnp
153364MBLAC2-metallo-beta-lactamase domain containing 25q14.3CV:PGCnp
153241CEP120CCDC100 | SRTD13centrosomal protein 120kDa5q23.2CV:PGCnp
DNM:McCarthy_2014
56136PCDHA13CNR5 | CNRN5 | CNRS5 | CRNR5 | PCDH-ALPHA13protocadherin alpha 135q31CV:PGCnp
GSMA_I
57717PCDHB16ME1 | PCDH-BETA16 | PCDH3X | PCDHB8aprotocadherin beta 165q31CV:PGCnp
GO_Annotation
GSMA_I
81848SPRY4HH17sprouty RTK signaling antagonist 45q31.3CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
GSMA_I
PMID:cooccur
79628SH3TC2CMT4C | MNMNSH3 domain and tetratricopeptide repeats 25q32CV:PGCnp
DNM:Fromer_2014
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
CompositeSet
134265AFAP1L1-actin filament associated protein 1 like 15q32CV:PGCnp
Expression
GR_Ng
GSMA_I
GSMA_IIA
GSMA_IIE
2196FAT2CDHF8 | CDHR9 | HFAT2 | MEGF1FAT atypical cadherin 25q33.1CV:GWASdb
CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
CompositeSet
Darnell FMRP targets
6444SGCD35DAG | CMD1L | DAGD | SG-delta | SGCDP | SGDsarcoglycan delta5q33.3CV:GWASdb
CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
1879EBF1COE1 | EBF | O/E-1 | OLF1early B-cell factor 15q34CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
6586SLIT3MEGF5 | SLIL2 | SLIT1 | Slit-3 | slit2slit guidance ligand 35q35Association
CV:GWASdb
CV:PGCnp
DNM:Gulsuner_2013
GO_Annotation
GR_Ng
GSMA_IIA
PMID:cooccur
30820KCNIP1KCHIP1 | VABPpotassium voltage-gated channel interacting protein 15q35.1CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_IIA
PMID:cooccur
8464SUPT3HSPT3 | SPT3LSPT3 homolog, SAGA and STAGA complex component6p21.1-p21.3CV:PGCnp
DEG:Sanders_2013
GSMA_IIE
60685ZFAND3TEX27zinc finger AN1-type containing 36p21.2CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIE
3111HLA-DOAHLA-DNA | HLA-DZA | HLADZmajor histocompatibility complex, class II, DO alpha6p21.3CV:PGCnp
GSMA_I
PMID:cooccur
10211FLOT1-flotillin 16p21.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Expression
GSMA_I
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
3008HIST1H1EH1.4 | H1E | H1F4 | H1s-4 | dJ221C16.5histone cluster 1, H1e6p21.3CV:GWASdb
CV:PGCnp
DNM:Xu_2012
GSMA_I
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
10537UBDFAT10 | GABBR1 | UBD-3ubiquitin D6p21.3CV:PGCnp
PMID:cooccur
4050LTBTNFC | TNFSF3 | TNLG1C | p33lymphotoxin beta6p21.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
170679PSORS1C1C6orf16 | SEEK1psoriasis susceptibility 1 candidate 16p21.3CV:GWASdb
CV:PGCnp
GSMA_I
8763CD164DFNA66 | MGC-24 | MUC-24 | endolynCD164 molecule6q21CV:PGCnp
DMG:Jaffe_2016
11149BVESHBVES | LGMD2X | POP1 | POPDC1blood vessel epicardial substance6q21CV:PGCnp
DMG:Wockner_2014
3908LAMA2LAMMlaminin subunit alpha 26q22-q23CV:PGCnp
DMG:Wockner_2014
DNM:Gulsuner_2013
DNM:Xu_2012
GO_Annotation
PMID:cooccur
CompositeSet
7128TNFAIP3A20 | AISBL | OTUD7C | TNFA1P2TNF alpha induced protein 36q23CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
9590AKAP12AKAP250 | SSeCKSA-kinase anchoring protein 126q24-q25CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
DMG:Wockner_2014
Expression
7432VIPPHM27vasoactive intestinal peptide6q25CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
135250RAET1ELETAL | N2DL-4 | NKG2DL4 | RAET1E2 | RL-4 | ULBP4 | bA350J20.7retinoic acid early transcript 1E6q25.1CV:PGCnp
6648SOD2IPOB | MNSOD | MVCD6superoxide dismutase 2, mitochondrial6q25.3Association
CV:PGCnp
PMID:cooccur
G2Cdb.human_clathrin
G2Cdb.human_mitochondria
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
401288LINC00242C6orf122 | NCRNA00242 | dJ266L20.5long intergenic non-protein coding RNA 2426q27CV:PGCnp
DMG:Jaffe_2016
84433CARD11BENTA | BIMP3 | CARMA1 | IMD11 | PPBLcaspase recruitment domain family member 117p22CV:PGCnp
GO_Annotation
7975MAFKNFE2U | P18v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog K7p22.3CV:PGCnp
DMG:Wockner_2014
51119SBDSCGI-97 | SDS | SWDSSBDS ribosome assembly guanine nucleotide exchange factor7q11.21DMG:Jaffe_2016
84163GTF2IRD2FP630 | GTF2IRD2 alpha | GTF2IRD2AGTF2I repeat domain containing 27q11.23CV:PGCnp
10875FGL2T49 | pT49fibrinogen like 27q11.23GO_Annotation
23089PEG10EDR | HB-1 | MEF3L | Mar2 | Mart2 | RGAG3paternally expressed 107q21CV:PGCnp
DMG:Nishioka_2013
27445PCLOACZ | PCH3piccolo presynaptic cytomatrix protein7q21.11CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
PROTEIN CLUSTERING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
5166PDK4-pyruvate dehydrogenase kinase 47q21.3CV:PGCnp
DEG:Zhao_2015
DMG:Wockner_2014
Expression
55607PPP1R9ANRB1 | NRBI | Neurabin-Iprotein phosphatase 1 regulatory subunit 9A7q21.3CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
64598MOSPD3CDS3 | NET30motile sperm domain containing 37q22DMG:Wockner_2014
4897NRCAM-neuronal cell adhesion molecule7q31CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
CompositeSet
55281TMEM140-transmembrane protein 1407q33CV:PGCnp
6867TACC1Ga55transforming acidic coiled-coil containing protein 18p11.22CV:PGCnp
DMG:Wockner_2014
5368PNOCN/OFQ | NOP | OFQ | PPNOC | ppN/OFQprepronociceptin8p21CV:GWASdb
CV:PGCnp
GO_Annotation
GSMA_IIA
GSMA_IIE
PMID:cooccur
1191CLUAAG4 | APO-J | APOJ | CLI | CLU1 | CLU2 | KUB1 | NA1/NA2 | SGP-2 | SGP2 | SP-40 | TRPM-2 | TRPM2clusterin8p21-p12CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
GSMA_IIE
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
57604KIAA1456C8orf79 | TRM9LKIAA14568p22CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
2055CLN8C8orf61 | EPMRceroid-lipofuscinosis, neuronal 88p23CV:PGCnp
DMG:Wockner_2014
GO_Annotation
286046XKR6C8orf21 | C8orf5 | C8orf7 | XRG6XK related 68p23.1CV:GWAScat
CV:PGCnp
DNM:Fromer_2014
CompositeSet
285ANGPT2AGPT2 | ANG2angiopoietin 28p23.1CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
80124VCPIP1DUBA3 | VCIP135valosin containing protein (p97)/p47 complex interacting protein 18q13CV:PGCnp
DMG:Jaffe_2016
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
Ascano FMRP targets
23462HEY1BHLHb31 | CHF2 | HERP2 | HESR1 | HRT-1 | OAF1 | hHRT1hes related family bHLH transcription factor with YRPW motif 18q21CV:PGCnp
GO_Annotation
11075STMN2SCG10 | SCGN10stathmin 28q21.13CV:GWASdb
CV:PGCnp
GO_Annotation
4325MMP16C8orf57 | MMP-X2 | MT-MMP2 | MT-MMP3 | MT3-MMPmatrix metallopeptidase 168q21.3CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
LK:YES
PMID:cooccur
157680VPS13BCHS1 | COH1vacuolar protein sorting 13 homolog B (yeast)8q22.2CV:PGCnp
DMG:Jaffe_2016
158381ATP8B5PFetAATPase phospholipid transporting 8B5, pseudogene9p13.3CV:PGCnp
8013NR4A3CHN | CSMF | MINOR | NOR1 | TECnuclear receptor subfamily 4 group A member 39q22CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
9830TRIM14-tripartite motif containing 149q22.33CV:PGCnp
DMG:Wockner_2014
7357UGCGGCS | GLCT1UDP-glucose ceramide glucosyltransferase9q31CV:PGCnp
83543AIF1LC9orf58 | IBA2allograft inflammatory factor 1-like9q34.13-q34.3CV:PGCnp
5730PTGDSL-PGDS | LPGDS | PDS | PGD2 | PGDS | PGDS2prostaglandin D2 synthase9q34.2-q34.3PMID:cooccur
54932EXD3mut-7exonuclease 3'-5' domain containing 39q34.3CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
CompositeSet
375775PNPLA7C9orf111 | NTE-R1 | NTEL1patatin like phospholipase domain containing 79q34.3CV:PGCnp
DMG:vanEijk_2014
DMG:Wockner_2014
1056CELBAL | BSDL | BSSL | CELL | CEase | FAP | FAPP | LIPA | MODY8carboxyl ester lipase9q34.3CV:PGCnp
PMID:cooccur
7102TSPAN7A15 | CCG-B7 | CD231 | DXS1692E | MRX58 | MXS1 | TALLA-1 | TM4SF2 | TM4SF2btetraspanin 7Xp11.4CV:PGCnp
PMID:cooccur
CompositeSet
Darnell FMRP targets
Potential synaptic genes
3563IL3RACD123 | IL3R | IL3RAY | IL3RX | IL3RY | hIL-3Rainterleukin 3 receptor subunit alphaXp22.3 or Yp11.3Association
PMID:cooccur
55841WWC3BM042WWC family member 3Xp22.32CV:GWASdb
CV:PGCnp
5365PLXNB3PLEXB3 | PLEXR | PLXN6plexin B3Xq28CV:PGCnp
PMID:cooccur
Potential synaptic genes