Search results: The pahtway p3615 has 463 genes in the original annotation. Currently, there are 262 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group ? Functional group ?
221061FAM171A1C10orf38family with sequence similarity 171 member A110p13CV:PGCnpG2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanNRC
Ascano FMRP targets
Potential synaptic genes
64421DCLRE1CA-SCID | DCLREC1C | RS-SCID | SCIDA | SNM1CDNA cross-link repair 1C10p13CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
Expression
26019UPF2HUPF2 | RENT2 | smg-3UPF2 regulator of nonsense transcripts homolog (yeast)10p14-p13CV:PGCnp
DMG:Jaffe_2016
DNM:Gulsuner_2013
Ascano FMRP targets
84991RBM17SPF45RNA binding motif protein 1710p15.1CV:PGCnp
DMG:Nishioka_2013
118738ZNF488-zinc finger protein 48810q11.22CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
9188DDX21GUA | GURDB | RH-II/GU | RH-II/GuADEAD-box helicase 2110q21CV:PGCnp
DMG:Jaffe_2016
DMG:vanEijk_2014
219790RTKN2PLEKHK1 | bA531F24.1rhotekin 210q21.2CV:PGCnp
PMID:cooccur
657BMPR1A10q23del | ACVRLK3 | ALK3 | CD292 | SKR5bone morphogenetic protein receptor type 1A10q22.3CV:PGCnp
9585KIF20BCT90 | KRMP1 | MPHOSPH1 | MPP-1 | MPP1kinesin family member 20B10q23.31CV:PGCnp
143282FGFBP3C10orf13 | FGF-BP3fibroblast growth factor binding protein 310q23.32CV:PGCnp
PMID:cooccur
3832KIF11EG5 | HKSP | KNSL1 | MCLMR | TRIP5kinesin family member 1110q24.1CV:PGCnp
CV:PheWAS
84986ARHGAP19-Rho GTPase activating protein 1910q24.1CV:PGCnp
DEG:Zhao_2015
10613ERLIN1C10orf69 | Erlin-1 | KE04 | KEO4 | SPFH1 | SPG62ER lipid raft associated 110q24.31CV:PGCnp
DMG:Jaffe_2016
143187VTI1AMMDS3 | MVti1 | VTI1RP2 | Vti1-rp2vesicle transport through interaction with t-SNAREs 1A10q25.2CV:PGCnp
DMG:Wockner_2014
GO_Annotation
INTRACELLULAR TRAFFICKING
6934TCF7L2TCF-4 | TCF4transcription factor 7 like 210q25.3CV:PGCnp
DMG:Jaffe_2016
Expression
PMID:cooccur
56647BCCIPTOK-1 | TOK1BRCA2 and CDKN1A interacting protein10q26.1CV:PGCnp
DMG:Jaffe_2016
GSMA_IIA
4288MKI67KIA | MIB- | MIB-1 | PPP1R105marker of proliferation Ki-6710q26.2CV:PGCnp
DNM:Fromer_2014
DNM:Gulsuner_2013
GSMA_IIA
CompositeSet
Ascano FMRP targets
90139TSPAN18TSPANtetraspanin 1811p11.2CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
627BDNFANON2 | BULN2brain-derived neurotrophic factor11p13Association
CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
GR_COR
GR_Ng
GR_WM
PMID:cooccur
NEUROTROPHIN SIGNALING
Potential synaptic genes
196074METTL15METT5D1methyltransferase like 1511p14.1CV:PGCnp
3939LDHAGSD11 | HEL-S-133P | LDHM | PIG19lactate dehydrogenase A11p15.4CV:PGCnp
Expression
CELL METABOLISM
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
7465WEE1WEE1A | WEE1huWEE1 G2 checkpoint kinase11p15.4CV:PGCnp
Expression
PMID:cooccur
29015SLC43A3EEG1 | FOAP-13 | PRO1659 | SEEEG-1solute carrier family 43 member 311q11CV:PGCnp
2237FEN1FEN-1 | MF1 | RAD2flap structure-specific endonuclease 111q12DMG:Nishioka_2013
DMG:Wockner_2014
PMID:cooccur
79073TMEM109-transmembrane protein 10911q12.2DMG:vanEijk_2014
7536SF1BBP | D11S636 | MBBP | ZCCHC25 | ZFM1 | ZNF162splicing factor 111q13CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
8500PPFIA1LIP.1 | LIP1 | LIPRINPTPRF interacting protein alpha 111q13.3CV:PGCnp
DMG:Wockner_2014
PROTEIN CLUSTERING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Potential synaptic genes
10714POLD3P66 | P68 | PPP1R128polymerase (DNA) delta 3, accessory subunit11q14CV:PGCnp
83875BCO2B-DIOX-II | BCDO2beta-carotene oxygenase 211q23.1CV:PGCnp
DMG:Wockner_2014
4900NRGNRC3 | hngneurogranin11q24Association
CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
GO_Annotation
GR_Ng
GR_WM
Network
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
7753ZNF202ZKSCAN10 | ZSCAN42zinc finger protein 20211q24CV:GWAScat
CV:PGCnp
PMID:cooccur
Ascano FMRP targets
399959MIR100HGAGD1 | lncRNA-N2mir-100-let-7a-2 cluster host gene11q24.1CV:GWASdb
CV:PGCnp
55572FOXRED1FP634 | H17FAD-dependent oxidoreductase domain containing 111q24.2CV:PGCnp
DMG:Jaffe_2016
DNM:Fromer_2014
CompositeSet
9743ARHGAP32GC-GAP | GRIT | PX-RICS | RICS | p200RhoGAP | p250GAPRho GTPase activating protein 3211q24.3CV:GWASdb
CV:PGCnp
GO_Annotation
Network
CompositeSet
Darnell FMRP targets
Potential synaptic genes
10059DNM1LDLP1 | DRP1 | DVLP | DYMPLE | EMPF | HDYNIVdynamin 1-like12p11.21CV:GWASdbENDOCYTOSIS
160518DENND5B-DENN domain containing 5B12p11.21CV:PGCnp
DMG:Jaffe_2016
Ascano FMRP targets
55711FAR2HEL-S-81 | MLSTD1 | SDR10E2fatty acyl-CoA reductase 212p11.22CV:PGCnp
23012STK38LNDR2serine/threonine kinase 38 like12p11.23CV:PGCnp
DNM:Fromer_2014
CompositeSet
55846ITFG2MDS028integrin alpha FG-GAP repeat containing 212p13.33CV:PGCnp
DMG:vanEijk_2014
5571PRKAG1AMPKGprotein kinase AMP-activated non-catalytic subunit gamma 112q13.12CV:PGCnp
DMG:vanEijk_2014
PMID:cooccur
5036PA2G4EBP1 | HG4-1 | p38-2G4proliferation-associated 2G412q13.2CV:PGCnp
DMG:Wockner_2014
Network
9924PAN2USP52PAN2 poly(A) specific ribonuclease subunit12q13.3CV:PGCnpAscano FMRP targets
1019CDK4CMM3 | PSK-J3cyclin-dependent kinase 412q14CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
Network
PMID:cooccur
117177RAB3IPRABIN3 | RABIN8RAB3A interacting protein12q15CV:PGCnp
7374UNGDGU | HIGM4 | HIGM5 | UDG | UNG1 | UNG15 | UNG2uracil DNA glycosylase12q23-q24.1CV:PGCnp
121441NEDD1GCP-WD | TUBGCP7neural precursor cell expressed, developmentally down-regulated 112q23.1CV:PGCnp
DMG:Wockner_2014
51434ANAPC7APC7anaphase promoting complex subunit 712q24.11CV:PGCnp
488ATP2A2ATP2B | DAR | DD | SERCA2ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 212q24.11CV:GWAScat
CV:PGC128
CV:PGCnp
GO_Annotation
PMID:cooccur
ION BALANCE
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
10961ERP29C12orf8 | ERp28 | ERp31 | HEL-S-107 | PDI-DB | PDIA9endoplasmic reticulum protein 2912q24.13CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
5426POLECRCS12 | FILS | POLE1polymerase (DNA) epsilon, catalytic subunit12q24.3CV:PGCnp
PMID:cooccur
Ascano FMRP targets
5901RANARA24 | Gsp1 | TC4RAN, member RAS oncogene family12q24.3CV:PGCnp
Network
PMID:cooccur
G2Cdb.humanNRC
G2Cdb.humanPSP
8562DENRDRP | DRP1 | SMAP-3density-regulated protein12q24.31CV:PGCnp
DMG:Jaffe_2016
10198MPHOSPH9MPP-9 | MPP9M-phase phosphoprotein 912q24.31CV:GWAScat
CV:PGC128
CV:PGCnp
DMG:Jaffe_2016
LK:YES
23141ANKLE2KIAA0692 | LEMD7 | Lem4 | MCPH16ankyrin repeat and LEM domain containing 212q24.33CV:PGCnp
DMG:Wockner_2014
26278SACSARSACS | DNAJC29 | PPP1R138 | SPAX6sacsin molecular chaperone13q12CV:PGCnp
Network
RNA AND PROTEIN SYNTHESIS
54737MPHOSPH8HSMPP8 | TWA3 | mpp8M-phase phosphoprotein 813q12.11CV:PGCnp
DMG:Jaffe_2016
5983RFC3RFC38replication factor C subunit 313q13.2CV:PGCnp
DMG:Jaffe_2016
5994RFXAP-regulatory factor X associated protein13q14CV:GWASdb
CV:PGCnp
23091ZC3H13KIAA0853zinc finger CCCH-type containing 1313q14.13CV:PGCnp
PMID:cooccur
79866BORAC13orf34bora, aurora kinase A activator13q22.1CV:PGCnp
PMID:cooccur
55757UGGT2HUGT2 | UGCGL2 | UGT2UDP-glucose glycoprotein glucosyltransferase 213q32.1CV:PGCnp
7027TFDP1DILC | DP1 | DRTF1 | Dp-1transcription factor Dp-113q34CV:PGCnp
DMG:Wockner_2014
54930HAUS4C14orf94HAUS augmin like complex subunit 414q11.2CV:PGCnp
GSMA_I
1743DLSTDLTSdihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)14q24.3CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_mitochondria
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
115708TRMT61AC14orf172 | GCD14 | Gcd14p | TRM61 | hTRM61tRNA methyltransferase 61A14q32CV:PGCnp
4734NEDD4NEDD4-1 | RPF1neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase15qCV:PGCnp
Network
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
9824ARHGAP11AGAP (1-12)Rho GTPase activating protein 11A15q13.2CNV:YES
DNM:Guipponi_2014
701BUB1BBUB1beta | BUBR1 | Bub1A | MAD3L | MVA1 | SSK1 | hBUBR1BUB1 mitotic checkpoint serine/threonine kinase B15q15CV:PGCnp
DMG:Jaffe_2016
9677PPIP5K1HISPPD2A | IP6K | IPS1 | VIP1 | hsVIP1diphosphoinositol pentakisphosphate kinase 115q15.3CV:PGCnp
22995CEP152MCPH4 | MCPH9 | SCKL5centrosomal protein 152kDa15q21.1CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
Ascano FMRP targets
55329MNS1SPATA40meiosis specific nuclear structural 115q21.3CV:PGCnp
145773FAM81A-family with sequence similarity 81 member A15q22.2CV:GWAScat
CV:GWASdb
CV:PGCnp
G2Cdb.human_TAP-PSD-95-CORE
CompositeSet
11057ABHD2HS1-2 | LABH2 | PHPS1-2abhydrolase domain containing 215q26.1CV:PGCnp
Expression
2521FUSALS6 | ETM4 | FUS1 | HNRNPP2 | POMP75 | TLSFUS RNA binding protein16p11.2CV:PGCnp
DMG:Jaffe_2016
GSMA_IIE
PMID:cooccur
G2Cdb.humanNRC
G2Cdb.humanPSP
Potential synaptic genes
84516DCTN5-dynactin subunit 516p12.2CV:PGCnp
GSMA_IIE
PMID:cooccur
51108METTL9CGI-81 | DREV | DREV1 | PAP1methyltransferase like 916p12.2CV:PGCnp
GSMA_IIE
5347PLK1PLK | STPK13polo like kinase 116p12.2CV:PGCnp
DMG:Jaffe_2016
GSMA_IIE
23042PDXDC1LP8165pyridoxal-dependent decarboxylase domain containing 116p13.11CV:PGCnp
GSMA_IIE
Ascano FMRP targets
55692LUC7LLUC7B1 | Luc7 | SR+89 | hLuc7B1LUC7-like16p13.3CV:PGCnp
899CCNFFBX1 | FBXO1cyclin F16p13.3CV:PGCnp
DMG:Nishioka_2013
79801SHCBP1PALSHC SH2-domain binding protein 116q11.2CV:PGCnp
GSMA_IIE
113540CMTM1CKLFH | CKLFH1 | CKLFSF1CKLF like MARVEL transmembrane domain containing 116q21CV:PGCnp
11060WWP2AIP2 | WWp2-likeWW domain containing E3 ubiquitin protein ligase 216q22.1CV:PGCnp
DMG:Wockner_2014
4775NFATC3NFAT4 | NFATXnuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 316q22.2CV:GWAScat
CV:PGC128
CV:PGCnp
PMID:cooccur
197259MLKLhMLKLmixed lineage kinase domain-like16q23.1CV:PGCnp
DMG:Wockner_2014
54758KLHDC4-kelch domain containing 416q24CV:PGCnp
6470SHMT1CSHMT | SHMTserine hydroxymethyltransferase 1 (soluble)17p11.2CV:PGCnp
PMID:cooccur
1984EIF5AEIF-5A | EIF5A1 | eIF5AIeukaryotic translation initiation factor 5A17p13-p12CV:PGCnp
9349RPL23L23 | rpL17ribosomal protein L2317qCV:PGCnp
Network
79915ATAD5C17orf41 | ELG1 | FRAG1ATPase family, AAA domain containing 517q11.2CV:PGCnp
Expression
54883CWC25CCDC49CWC25 spliceosome-associated protein homolog17q12CV:PGCnp
10197PSME3HEL-S-283 | Ki | PA28-gamma | PA28G | PA28gamma | REG-GAMMAproteasome activator subunit 317q21CV:PGCnp
DMG:vanEijk_2014
Expression
Network
4137MAPTDDPAC | FTDP-17 | MAPTL | MSTD | MTBT1 | MTBT2 | PPND | PPP1R103 | TAUmicrotubule associated protein tau17q21.1CV:PGCnp
CV:PheWAS
GO_Annotation
Network
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Potential synaptic genes
29893PSMC3IPGT198 | HOP2 | HUMGT198A | ODG3 | TBPIPPSMC3 interacting protein17q21.2DMG:Jaffe_2016
DMG:Wockner_2014
51326ARL17AARF1P2 | ARL17P1ADP ribosylation factor like GTPase 17A17q21.31CV:PGCnp
474170LRRC37A2LRRC37leucine-rich repeat containing 37 member A217q21.31CV:PGCnp
80174DBF4BASKL1 | CHIFB | DRF1 | ZDBF1BDBF4 zinc finger B17q21.31|17q21CV:PGCnp
3837KPNB1IMB1 | IPO1 | IPOB | Impnb | NTF97karyopherin subunit beta 117q21.32DMG:Nishioka_2013
DMG:Wockner_2014
Expression
STRUCTURAL PLASTICITY
CompositeSet
Ascano FMRP targets
11143KAT7HBO1 | HBOA | MYST2 | ZC2HC7lysine acetyltransferase 717q21.32CV:PGCnp
Network
83990BRIP1BACH1 | FANCJ | OFBRCA1 interacting protein C-terminal helicase 117q22.2CV:PGCnp
DMG:Nishioka_2013
57513CASKIN2ANKS5BCASK interacting protein 217q25.1CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
PROTEIN CLUSTERING
Ascano FMRP targets
396ARHGDIAGDIA1 | HEL-S-47e | NPHS8 | RHOGDI | RHOGDI-1Rho GDP dissociation inhibitor (GDI) alpha17q25.3PMID:cooccurEXOCYTOSIS
CompositeSet
124583CANT1DBQD | DBQD1 | SCAN-1 | SCAN1 | SHAPYcalcium activated nucleotidase 117q25.3CV:PGCnp
10939AFG3L2SCA28 | SPAX5AFG3 like matrix AAA peptidase subunit 218p11CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
9989PPP4R1MEG1 | PP4(Rmeg) | PP4R1protein phosphatase 4 regulatory subunit 118p11.22CV:PGCnpAscano FMRP targets
11031RAB31Rab22BRAB31, member RAS oncogene family18p11.3CV:PGCnp
DMG:vanEijk_2014
DMG:Wockner_2014
Expression
INTRACELLULAR TRAFFICKING
9097USP14TGTubiquitin specific peptidase 1418p11.32CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
4087SMAD2JV18 | JV18-1 | MADH2 | MADR2 | hMAD-2 | hSMAD2SMAD family member 218q21.1CV:PGCnp
Network
PMID:cooccur
220134SKA1C18orf24spindle and kinetochore associated complex subunit 118q21.1CV:PGCnp
DMG:Wockner_2014
7644ZNF91HPF7 | HTF10zinc finger protein 9119p12CV:PGCnpAscano FMRP targets
9534ZNF254BMZF-5 | HD-ZNF1 | ZNF539 | ZNF91Lzinc finger protein 25419p12DMG:Wockner_2014
284443ZNF493-zinc finger protein 49319p12CV:PGCnp
DMG:Wockner_2014
56342PPANBXDC3 | SSF | SSF-1 | SSF1 | SSF2peter pan homolog (Drosophila)19p13DMG:Nishioka_2013
55723ASF1BCIA-IIanti-silencing function 1B histone chaperone19p13.12DMG:Jaffe_2016Chromatin Remodeling Genes
54862CC2D1AFREUD-1 | Freud-1/Aki1 | MRT3coiled-coil and C2 domain containing 1A19p13.12DMG:Wockner_2014CompositeSet
Ascano FMRP targets
4298MLLT1ENL | LTG19 | YEATS1myeloid/lymphoid or mixed-lineage leukemia; translocated to, 119p13.3CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
10452TOMM40C19orf1 | D19S1177E | PER-EC1 | PEREC1 | TOM40translocase of outer mitochondrial membrane 4019q13PMID:cooccur
4793NFKBIBIKBB | TRIP9NFKB inhibitor beta19q13.1CV:PGCnp
Network
11100HNRNPUL1E1B-AP5 | E1BAP5 | HNRPUL1heterogeneous nuclear ribonucleoprotein U-like 119q13.2CV:PGCnpCompositeSet
Darnell FMRP targets
6625SNRNP70RNPU1Z | RPU1 | SNRP70 | Snp1 | U1-70K | U170K | U1AP | U1RNPsmall nuclear ribonucleoprotein U1 subunit 7019q13.3CV:PGCnp
90233ZNF551-zinc finger protein 55119q13.43DNM:Fromer_2014
Expression
CompositeSet
27300ZNF544-zinc finger protein 54419q13.43CV:PGCnp
DMG:Wockner_2014
26227PHGDH3-PGDH | 3PGDH | HEL-S-113 | NLS | NLS1 | PDG | PGAD | PGD | PGDH | PHGDHD | SERAphosphoglycerate dehydrogenase1p12CV:PGCnp
GO_Annotation
GSMA_I
GSMA_IIA
PMID:cooccur
CELL METABOLISM
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
51592TRIM33ECTO | PTC7 | RFG7 | TF1G | TIF1G | TIF1GAMMA | TIFGAMMAtripartite motif containing 331p13.1CV:GWAScat
CV:GWASdb
CV:PGCnp
GSMA_I
GSMA_IIA
29899GPSM2CMCS | DFNB82 | LGN | PINSG-protein signaling modulator 21p13.3CV:PGCnp
DMG:Wockner_2014
Network
Potential synaptic genes
84230LRRC8CAD158 | FAD158leucine-rich repeat containing 8 family member C1p22.2CV:PGCnp
DMG:Jaffe_2016
Expression
55225RAVER2-ribonucleoprotein, PTB-binding 21p31.3CV:GWASdb
CV:PGCnp
GSMA_IIA
6491STILMCPH7 | SILSCL/TAL1 interrupting locus1p32CV:PGCnp
DMG:Jaffe_2016
51361HOOK1HK1hook microtubule-tethering protein 11p32.1CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
Expression
GSMA_IIA
127343DMBX1MBX | OTX3 | PAXBdiencephalon/mesencephalon homeobox 11p33CV:PGCnp
GO_Annotation
11004KIF2CCT139 | KNSL6 | MCAKkinesin family member 2C1p34.1CV:PGCnp
PMID:cooccur
Ascano FMRP targets
8761PABPC4APP-1 | APP1 | PABP4 | iPABPpoly(A) binding protein, cytoplasmic 4 (inducible form)1p34.2CV:PGCnpG2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
63967CLSPN-claspin1p34.2CV:PGCnp
DNM:Fromer_2014
CompositeSet
Ascano FMRP targets
149175MANEAL-mannosidase endo-alpha like1p34.3CV:PGCnp
399474TMEM200BTTMBtransmembrane protein 200B1p35CV:PGCnp
3208HPCABDR2 | DYT2hippocalcin1p35-p34.2CV:PGCnp
DNM:Guipponi_2014
INTRACELLULAR SIGNAL TRANSDUCTION
Potential synaptic genes
6429SRSF4SFRS4 | SRP75serine/arginine-rich splicing factor 41p35.3CV:PGCnp
8289ARID1AB120 | BAF250 | BAF250a | BM029 | C1orf4 | ELD | MRD14 | OSA1 | P270 | SMARCF1 | hELD | hOSA1AT-rich interaction domain 1A1p35.3CV:PGCnpCompositeSet
Darnell FMRP targets
Chromatin Remodeling Genes
5909RAP1GAPRAP1GA1 | RAP1GAP1 | RAP1GAPII | RAPGAPRAP1 GTPase activating protein1p36.1-p35CV:PGCnp
DMG:Wockner_2014
CANABINOID
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
55721IQCC-IQ motif containing C1p36.11-p34.2CV:GWASdb
DMG:Nishioka_2013
DMG:Wockner_2014
51107APH1A6530402N02Rik | APH-1 | APH-1A | CGI-78aph-1 homolog A, gamma secretase subunit1p36.13-q31.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIA
PMID:cooccur
NEUROTROPHIN SIGNALING
83715ESPNDFNB36 | LP2654espin1p36.31CV:PGCnp
DMG:Nishioka_2013
DNM:Fromer_2014
GO_Annotation
CompositeSet
8407TAGLN2HA1756transgelin 21q21-q25CV:PGCnp
DMG:vanEijk_2014
GSMA_I
GSMA_IIA
Network
11311VPS45H1 | H1VPS45 | SCN5 | VPS45A | VPS45B | VPS54A | VSP45 | VSP45Avacuolar protein sorting 45 homolog (S. cerevisiae)1q21.2CV:GWAScat
CV:PGC128
CV:PGCnp
GSMA_I
GSMA_IIA
INTRACELLULAR TRAFFICKING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
57657HCN3-hyperpolarization activated cyclic nucleotide gated potassium channel 31q22CV:PGCnp
GSMA_I
GSMA_IIA
PMID:cooccur
10485C1orf61CROC4chromosome 1 open reading frame 611q22CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
57645POGKBASS2 | KRBOX2 | LST003pogo transposable element with KRAB domain1q24.1CV:PGCnp
DMG:vanEijk_2014
81563C1orf21PIG13chromosome 1 open reading frame 211q25CV:PGCnp
DMG:Jaffe_2016
4194MDM4HDMX | MDMX | MRP1MDM4, p53 regulator1q32CV:PGCnp
Network
PMID:cooccur
9928KIF14MKS12kinesin family member 141q32.1CV:PGCnp
DNM:Fromer_2014
CompositeSet
89796NAV1POMFIL3 | STEERIN1 | UNC53H1neuron navigator 11q32.3CV:PGCnp
DEG:Zhao_2015
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
55740ENAHENA | MENA | NDPP1enabled homolog (Drosophila)1q42.12CV:PGCnp
GO_Annotation
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
84515MCM8C20orf154 | POF10 | dJ967N21.5minichromosome maintenance 8 homologous recombination repair factor20p12.3CV:PGCnp
CV:PheWAS
54976C20orf27-chromosome 20 open reading frame 2720p13CV:PGCnp
DMG:Nishioka_2013
10528NOP56NOL5A | SCA36NOP56 ribonucleoprotein20p13CV:PGCnp
3420IDH3BH-IDHB | RP46isocitrate dehydrogenase 3 (NAD+) beta20p13CV:PGCnp
Expression
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_mitochondria
G2Cdb.humanPSD
G2Cdb.humanPSP
8894EIF2S2EIF2 | EIF2B | EIF2beta | PPP1R67 | eIF-2-betaeukaryotic translation initiation factor 2 subunit beta20q11.2CV:PGCnp
Network
Ascano FMRP targets
23613ZMYND8PRKCBP1 | PRO2893 | RACK7zinc finger MYND-type containing 820q13.12CV:PGCnp
Network
11083DIDO1BYE1 | C20orf158 | DATF-1 | DATF1 | DIDO2 | DIDO3 | DIO-1 | DIO1 | dJ885L7.8death inducer-obliterator 120q13.33CV:GWASdb
CV:PGCnp
CompositeSet
Darnell FMRP targets
57466SCAF4SFRS15 | SRA4SR-related CTD associated factor 421q22.1CV:PGCnp
54069MIS18AB28 | C21orf45 | C21orf46 | FASP1 | MIS18alpha | hMis18alphaMIS18 kinetochore protein A21q22.11CV:PGCnp
DMG:Jaffe_2016
25966C2CD2C21orf25 | C21orf258 | TMEM24LC2 calcium-dependent domain containing 221q22.3CV:PGCnp
157ADRBK2BARK2 | GRK3adrenergic, beta, receptor kinase 222q12.1CV:PGCnp
GSMA_I
PMID:cooccur
25777SUN2UNC84BSad1 and UNC84 domain containing 222q13.1CV:PGCnp
7008TEF-thyrotrophic embryonic factor22q13.2CV:PGCnp
DMG:Jaffe_2016
CompositeSet
Darnell FMRP targets
9701PPP6R2KIAA0685 | PP6R2 | SAP190 | SAPS2protein phosphatase 6 regulatory subunit 222q13.33CV:PGCnp
22934RPIARPI | RPIADribose 5-phosphate isomerase A2p11.2CV:PGCnp
DMG:Jaffe_2016
GSMA_I
7840ALMS1ALSSALMS1, centrosome and basal body associated protein2p13CV:PGCnp
DNM:Fromer_2014
Expression
CompositeSet
Ascano FMRP targets
9784SNX17-sorting nexin 172p23.3CV:PGCnp
1058CENPACENP-A | CenH3centromere protein A2p23.3CV:PGCnp
7781SLC30A3ZNT3solute carrier family 30 member 32p23.3CV:PGCnp
DEG:Maycox_2009
GO_Annotation
PMID:cooccur
ION BALANCE
G2Cdb.humanPSD
G2Cdb.humanPSP
348654GEN1GenGEN1, Holliday junction 5' flap endonuclease2p24.2CV:PGCnp
246243RNASEH1H1RNA | PEOB2 | RNH1ribonuclease H12p25CV:PGCnp
129642MBOAT2LPCAT4 | OACT2membrane bound O-acyltransferase domain containing 22p25.1CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
129787TMEM18-transmembrane protein 182p25.3CV:PGCnp
PMID:cooccur
81562LMAN2LVIPLlectin, mannose binding 2 like2q11.2CV:PGCnp
DMG:Nishioka_2013
GSMA_I
PMID:cooccur
150468CKAP2L-cytoskeleton associated protein 2 like2q13CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIA
55183RIF1-replication timing regulatory factor 12q23.3CV:PGCnp
DNM:Fromer_2014
GSMA_IIA
Network
CompositeSet
83879CDCA7JPO1cell division cycle associated 72q31CV:PGCnp
DNM:Fromer_2014
CompositeSet
3329HSPD1CPN60 | GROEL | HLD4 | HSP-60 | HSP60 | HSP65 | HuCHA60 | SPG13heat shock protein family D (Hsp60) member 12q33.1CV:PGCnp
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_mitochondria
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
580BARD1-BRCA1 associated RING domain 12q35CV:PGCnp
GSMA_IIA
GSMA_IIE
Network
PMID:cooccur
151473SLC16A14MCT14solute carrier family 16 member 142q36.3CV:PGCnp
DMG:Wockner_2014
55164SHQ1GRIM-1 | Shq1pSHQ1, H/ACA ribonucleoprotein assembly factor3p13CV:GWASdb
CV:PGCnp
GSMA_IIA
GSMA_IIE
993CDC25ACDC25A2cell division cycle 25A3p21CV:PGCnpAscano FMRP targets
389125MUSTN1MUSTANGmusculoskeletal, embryonic nuclear protein 13p21.1CV:PGCnp
LK:YES
9730VPRBPDCAF1Vpr (HIV-1) binding protein3p21.2CV:PGCnpAscano FMRP targets
23132RAD54L2ARIP4 | HSPC325 | SRISNF2LRAD54-like 2 (S. cerevisiae)3p21.2CV:GWASdb
CV:PGCnp
DNM:Fromer_2014
DNM:Gulsuner_2013
CompositeSet
Ascano FMRP targets
9779TBC1D5-TBC1 domain family member 53p24.3CV:GWASdb
CV:PGCnp
GSMA_I
23225NUP210GP210 | POM210nucleoporin 210kDa3p25.1CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
GSMA_I
CompositeSet
200894ARL13BARL2L1 | JBTS8ADP ribosylation factor like GTPase 13B3q11.1CV:PGCnp
GSMA_IIA
GSMA_IIE
26137ZBTB20DPZF | HOF | ODA-8S | PRIMS | ZNF288zinc finger and BTB domain containing 203q13.2CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GSMA_IIA
GSMA_IIE
PMID:cooccur
10274STAG1SA1 | SCC3Astromal antigen 13q22.3CV:GWAScat
CV:PGC128
CV:PGCnp
DNM:Xu_2012
CompositeSet
205428C3orf58DIA1 | GoPro49 | HASFchromosome 3 open reading frame 583q24CV:PGCnp
DMG:Nishioka_2013
5217PFN2D3S1319E | PFLprofilin 23q25.1NetworkSTRUCTURAL PLASTICITY
CompositeSet
54965PIGXPIG-Xphosphatidylinositol glycan anchor biosynthesis class X3q29CNV:YES
CV:PGCnp
80306MED281500003D12Rik | EG1 | magicinmediator complex subunit 284p16CV:PGCnp
7468WHSC1MMSET | NSD2 | REIIBP | TRX5 | WHSWolf-Hirschhorn syndrome candidate 14p16.3CV:PGCnp
DMG:Wockner_2014
Chromatin Remodeling Genes
25849PARM1Cipar1 | DKFZP564O0823 | PARM-1 | WSC4prostate androgen-regulated mucin-like protein 14q13.3-q21.3CV:PGCnp
DNM:Fromer_2014
CompositeSet
1062CENPECENP-E | KIF10 | MCPH13 | PPP1R61centromere protein E4q24-q25CV:PGCnp
DMG:Jaffe_2016
7368UGT8CGT | UGT4UDP glycosyltransferase 84q26CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
23657SLC7A11CCBR1 | xCTsolute carrier family 7 member 114q28.3CV:GWASdb
CV:PGCnp
DNM:McCarthy_2014
GO_Annotation
PMID:cooccur
6502SKP2FBL1 | FBXL1 | FLB1 | p45S-phase kinase-associated protein 2, E3 ubiquitin protein ligase5p13CV:PGCnp
79888LPCAT1AGPAT10 | AGPAT9 | AYTL2 | PFAAP3 | lpcatlysophosphatidylcholine acyltransferase 15p15.33CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
55722CEP72-centrosomal protein 72kDa5p15.33CV:PGCnp
DMG:Montano_2016
Ascano FMRP targets
10184LHFPL2-lipoma HMGIC fusion partner-like 25q14.1CV:PGCnp
DMG:Wockner_2014
4001LMNB1ADLD | LMN | LMN2 | LMNBlamin B15q23.2CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
GSMA_I
Network
G2Cdb.humanNRC
51735RAPGEF6KIA001LB | PDZ-GEF2 | PDZGEF2 | RA-GEF-2 | RAGEF2Rap guanine nucleotide exchange factor 65q31.1Association
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
Expression
GR_Ng
GR_WM
GSMA_I
PMID:cooccur
113829SLC35A4-solute carrier family 35 member A45q31.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
153768PRELID2-PRELI domain containing 25q32CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIA
GSMA_IIE
133522PPARGC1BERRL1 | PERC | PGC-1(beta) | PGC1BPPARG coactivator 1 beta5q32CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
79685SAP30LNS4ATP2SAP30-like5q33.2CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
153830RNF145-ring finger protein 1455q33.3CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
3182HNRNPABABBP1 | HNRPABheterogeneous nuclear ribonucleoprotein A/B5q35.3CV:GWASdb
CV:PGCnp
4172MCM3HCC5 | P1-MCM3 | P1.h | RLFBminichromosome maintenance complex component 36p12CV:PGCnp
DMG:Montano_2016
DMG:Nishioka_2013
GSMA_IIE
Network
Ascano FMRP targets
57510XPO5exp5exportin 56p21.1CV:PGCnp
DMG:vanEijk_2014
DMG:Wockner_2014
GSMA_IIE
Ascano FMRP targets
27242TNFRSF21BM-018 | CD358 | DR6tumor necrosis factor receptor superfamily member 216p21.1CV:PGCnp
DMG:Jaffe_2016
GSMA_IIE
10695CNPY3CAG4A | ERDA5 | PRAT4A | TNRC5canopy FGF signaling regulator 36p21.1DMG:vanEijk_2014
GO_Annotation
GSMA_IIE
2030SLC29A1ENT1solute carrier family 29 member 16p21.1CV:PGCnp
DMG:Nishioka_2013
GSMA_IIE
6941TCF19SC1 | TCF-19transcription factor 196p21.3CV:PGCnp
GSMA_I
4439MSH5G7 | MUTSH5 | NG23mutS homolog 56p21.3CV:GWASdb
CV:PGCnp
GO_Annotation
GSMA_I
PMID:cooccur
3833KIFC1HSET | KNSL2kinesin family member C16p21.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
Ascano FMRP targets
10473HMGN4HMG17L3 | NHChigh mobility group nucleosomal binding domain 46p21.3CV:PGCnp
GSMA_I
10211FLOT1-flotillin 16p21.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Expression
GSMA_I
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
23ABCF1ABC27 | ABC50ATP binding cassette subfamily F member 16p21.33CV:PGCnp
GSMA_I
PMID:cooccur
Ascano FMRP targets
203068TUBBCDCBM6 | CSCSC1 | M40 | OK/SW-cl.56 | TUBB1 | TUBB5tubulin beta class I6p21.33CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_I
Network
STRUCTURAL PLASTICITY
8360HIST1H4DH4/b | H4FB | dJ221C16.9histone cluster 1, H4d6p22.2CV:PGCnp
GSMA_I
654BMP6VGR | VGR1bone morphogenetic protein 66p24-p23CV:PGCnp
GSMA_I
PMID:cooccur
83732RIOK1AD034 | RRP10 | bA288G3.1RIO kinase 16p24.3CV:PGCnp
DMG:Jaffe_2016
GSMA_I
79694MANEAENDO | hEndomannosidase endo-alpha6q16.1CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
4602MYBCmyb | c-myb | c-myb_CDS | efgMYB proto-oncogene, transcription factor6q22-q23CV:PGCnp
PMID:cooccur
257218SHPRHbA545I5.2SNF2 histone linker PHD RING helicase6q24.3CV:PGCnp
DMG:Jaffe_2016
Ascano FMRP targets
84918LRP11MANSC3 | bA350J20.3LDL receptor related protein 116q25.1CV:PGCnp
DMG:Jaffe_2016
2099ESR1ER | ESR | ESRA | ESTRR | Era | NR3A1estrogen receptor 16q25.1CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Expression
Network
PMID:cooccur
81552VOPP1ECOP | GASPvesicular, overexpressed in cancer, prosurvival protein 17p11.2CV:PGCnp
DEG:Maycox_2009
63979FIGNL1-fidgetin like 17p12.1CV:PGCnp
DMG:Wockner_2014
222068TMED4ERS25 | GMP25iso | HNLF | p24a3 | p24alpha3transmembrane p24 trafficking protein 47p13CV:PGCnp
DMG:Jaffe_2016
29896TRA2AAWMS1 | HSU53209transformer 2 alpha homolog (Drosophila)7p15.3CV:PGCnp
DMG:Nishioka_2013
54468MIOS-missing oocyte, meiosis regulator, homolog (Drosophila)7p21.3CV:PGCnp
DMG:Jaffe_2016
DNM:Gulsuner_2013
PMID:cooccur
55501CHST12C4S-2 | C4ST-2 | C4ST2carbohydrate (chondroitin 4) sulfotransferase 127p22CV:GWASdb
CV:PGCnp
DMG:Montano_2016
DMG:vanEijk_2014
51427ZNF107Y8 | ZFD25 | ZNF588 | smap-7zinc finger protein 1077q11.2CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
2969GTF2IBAP135 | BTKAP1 | DIWS | GTFII-I | IB291 | SPIN | TFII-I | WBS | WBSCR6general transcription factor IIi7q11.23CV:PGCnp
Network
PMID:cooccur
9883POM121P145 | POM121APOM121 transmembrane nucleoporin7q11.23CNV:YES
CV:PGCnp
DMG:Jaffe_2016
5982RFC2RFC40replication factor C subunit 27q11.23CNV:YES
CV:PGCnp
DMG:Jaffe_2016
55973BCAP29BAP29B-cell receptor-associated protein 297q22.3CV:PGCnp
DMG:Jaffe_2016
23534TNPO3IPO12 | LGMD1F | MTR10A | TRN-SR | TRN-SR2 | TRNSRtransportin 37q32.1CV:PGCnpAscano FMRP targets
84912SLC35B4YEA | YEA4solute carrier family 35 member B47q33CV:PGCnp
PMID:cooccur
90956ADCK2AARFaarF domain containing kinase 27q34CV:PGCnp
DMG:Jaffe_2016
54904WHSC1L1NSD3 | WHISTLE | pp14328Wolf-Hirschhorn syndrome candidate 1-like 18p11.2CV:PGCnp
DMG:Jaffe_2016
Chromatin Remodeling Genes
84750FUT10-fucosyltransferase 10 (alpha (1,3) fucosyltransferase)8p12CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
80346REEP4C8orf20 | PP432 | Yip2creceptor accessory protein 48p21.3DMG:Nishioka_2013
GSMA_I
GSMA_IIA
GSMA_IIE
9134CCNE2CYCE2cyclin E28q22.1DMG:Jaffe_2016
7534YWHAZ14-3-3-zeta | HEL-S-3 | HEL-S-93 | HEL4 | KCIP-1 | YWHADtyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta8q23.1Association
CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
Network
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_mGluR5
G2Cdb.human_mitochondria
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Potential synaptic genes
84294UTP23C8orf53UTP23, small subunit processome component8q24.11CV:PGCnp
DMG:Jaffe_2016
9833MELKHPK38maternal embryonic leucine zipper kinase9p13.2CV:PGCnp
54801HAUS6Dgt6 | FAM29AHAUS augmin like complex subunit 69p22.1CV:PGCnp
DNM:Fromer_2014
CompositeSet
11168PSIP1DFS70 | LEDGF | PAIP | PSIP2 | p52 | p75PC4 and SFRS1 interacting protein 19p22.3CV:PGCnp
158358KIAA2026-KIAA20269p24.1CV:PGCnp
51280GOLM1C9orf155 | GOLPH2 | GP73 | HEL46 | PSEC0257 | bA379P1.3golgi membrane protein 19q21.33CV:PGCnp
DMG:Wockner_2014
5774PTPN3PTP-H1 | PTPH1protein tyrosine phosphatase, non-receptor type 39q31CV:PGCnp
DNM:Fromer_2014
CompositeSet
Ascano FMRP targets
55342STRBPHEL162 | ILF3L | SPNR | p74spermatid perinuclear RNA binding protein9q33.3CV:PGCnp
DMG:vanEijk_2014
6837MED22MED24 | SURF5 | surf-5mediator complex subunit 229q34.2CV:PGCnp
10013HDAC6CPBHM | HD6 | JM21 | PPP1R90histone deacetylase 6Xp11.23CV:PGCnp
DMG:vanEijk_2014
Chromatin Remodeling Genes
Potential synaptic genes